| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184530
Identifier: 189184530
GI number: 189184530
Start: 1650552
End: 1650797
Strand: Reverse
Name: 189184530
Synonym: OTT_1623
Alternate gene names: NA
Gene position: 1650797-1650552 (Counterclockwise)
Preceding gene: 189184531
Following gene: 189184529
Centisome position: 82.17
GC content: 28.05
Gene sequence:
>246_bases ATGTCAGAAAATGTTGTCTCTAGTAACCAACTCAAACAAATTATTGAAAAAATTGAAAGATTAGAAGTTGAAAAAGCTAA TATCACAGAAGACATTCAAGCAGTGTATGCTGAAGCAAAAAGTTATGGATTAGACACTCATACACTGAAGCAAGTAATTA AAATCAAAAAAATGGATAAAAGTAAATTTAAAGAACAAGAAGAATTACTTGAGACTTACTTAAGTGCTTTAGGAATAACA TCATAA
Upstream 100 bases:
>100_bases ACAAATTTTCTCCTATTTGCAATTACTTTAAATAGTGTATATTATTACTAAGATTTAGTATTTCAAATCAAAAAATTTAA TAACACAAAGAAGGATTTAT
Downstream 100 bases:
>100_bases TTAAGAGTTGTTAAATGCATTAAATTATGTAATTAATAAATTGTCAGTAAGGTAGAAAATAAGTAGAAAAAAAATTCAGG AAATTGGGGTCCAGTTTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 81; Mature: 80
Protein sequence:
>81_residues MSENVVSSNQLKQIIEKIERLEVEKANITEDIQAVYAEAKSYGLDTHTLKQVIKIKKMDKSKFKEQEELLETYLSALGIT S
Sequences:
>Translated_81_residues MSENVVSSNQLKQIIEKIERLEVEKANITEDIQAVYAEAKSYGLDTHTLKQVIKIKKMDKSKFKEQEELLETYLSALGIT S >Mature_80_residues SENVVSSNQLKQIIEKIERLEVEKANITEDIQAVYAEAKSYGLDTHTLKQVIKIKKMDKSKFKEQEELLETYLSALGITS
Specific function: Unknown
COG id: COG3750
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0335 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018753 [H]
Pfam domain/function: PF10073 DUF2312 [H]
EC number: NA
Molecular weight: Translated: 9260; Mature: 9129
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSENVVSSNQLKQIIEKIERLEVEKANITEDIQAVYAEAKSYGLDTHTLKQVIKIKKMDK CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH SKFKEQEELLETYLSALGITS HHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SENVVSSNQLKQIIEKIERLEVEKANITEDIQAVYAEAKSYGLDTHTLKQVIKIKKMDK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH SKFKEQEELLETYLSALGITS HHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA