Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189184530

Identifier: 189184530

GI number: 189184530

Start: 1650552

End: 1650797

Strand: Reverse

Name: 189184530

Synonym: OTT_1623

Alternate gene names: NA

Gene position: 1650797-1650552 (Counterclockwise)

Preceding gene: 189184531

Following gene: 189184529

Centisome position: 82.17

GC content: 28.05

Gene sequence:

>246_bases
ATGTCAGAAAATGTTGTCTCTAGTAACCAACTCAAACAAATTATTGAAAAAATTGAAAGATTAGAAGTTGAAAAAGCTAA
TATCACAGAAGACATTCAAGCAGTGTATGCTGAAGCAAAAAGTTATGGATTAGACACTCATACACTGAAGCAAGTAATTA
AAATCAAAAAAATGGATAAAAGTAAATTTAAAGAACAAGAAGAATTACTTGAGACTTACTTAAGTGCTTTAGGAATAACA
TCATAA

Upstream 100 bases:

>100_bases
ACAAATTTTCTCCTATTTGCAATTACTTTAAATAGTGTATATTATTACTAAGATTTAGTATTTCAAATCAAAAAATTTAA
TAACACAAAGAAGGATTTAT

Downstream 100 bases:

>100_bases
TTAAGAGTTGTTAAATGCATTAAATTATGTAATTAATAAATTGTCAGTAAGGTAGAAAATAAGTAGAAAAAAAATTCAGG
AAATTGGGGTCCAGTTTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 81; Mature: 80

Protein sequence:

>81_residues
MSENVVSSNQLKQIIEKIERLEVEKANITEDIQAVYAEAKSYGLDTHTLKQVIKIKKMDKSKFKEQEELLETYLSALGIT
S

Sequences:

>Translated_81_residues
MSENVVSSNQLKQIIEKIERLEVEKANITEDIQAVYAEAKSYGLDTHTLKQVIKIKKMDKSKFKEQEELLETYLSALGIT
S
>Mature_80_residues
SENVVSSNQLKQIIEKIERLEVEKANITEDIQAVYAEAKSYGLDTHTLKQVIKIKKMDKSKFKEQEELLETYLSALGITS

Specific function: Unknown

COG id: COG3750

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0335 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018753 [H]

Pfam domain/function: PF10073 DUF2312 [H]

EC number: NA

Molecular weight: Translated: 9260; Mature: 9129

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSENVVSSNQLKQIIEKIERLEVEKANITEDIQAVYAEAKSYGLDTHTLKQVIKIKKMDK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
SKFKEQEELLETYLSALGITS
HHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SENVVSSNQLKQIIEKIERLEVEKANITEDIQAVYAEAKSYGLDTHTLKQVIKIKKMDK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
SKFKEQEELLETYLSALGITS
HHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA