| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184486
Identifier: 189184486
GI number: 189184486
Start: 1610250
End: 1610735
Strand: Reverse
Name: 189184486
Synonym: OTT_1579
Alternate gene names: NA
Gene position: 1610735-1610250 (Counterclockwise)
Preceding gene: 189184487
Following gene: 189184485
Centisome position: 80.18
GC content: 23.66
Gene sequence:
>486_bases ATGCTTTATCAGTCGGTAATTTTTTATTTTATAATTCTACTTTCTGGTGTACTTAATTTTATTTTATTTAATTTAAGAAT CGATAGTACTGCTTTTCCAGATGTTGAAATTGTGGTTGTTTTTTGTGCTGCATTTTATTATGGAGCATCACTGTTTTCGA TTTTTACATATGGTCTAATAATAGATCTTTTTCATTGCACTAATTTTGGCATCACATCTCTAGTTCTTATAATTACTTTT TTAGTATTTACTGCTATACAAAAGAATTTTAAATTATTGGATTATTGTAATAGTTATATTGTTTGCTTAATGTATCTAAT GTTATTTACTAGTTTAAAATTATTTCTAATTGCTATTTATGATCATATAAACATTAATTATCAGATTCTAATTTTCAAAA TTCTAACTAGCAGCTTGTGTTATTTTCCTTTAAGCAAAATTTTCCAATATATTTTTCGTAATTTAACACTCAGTGATGTT GAATAA
Upstream 100 bases:
>100_bases CGATAATTGCTTCTACGCTTCTTGGGATTGGACTAGTTATGAATAGTTATGTCAATAAAGACGTTGATATAGTTAAATCG CATTATTTATCATAAAAATT
Downstream 100 bases:
>100_bases CAAAGTACATCAAAACAGATTGATTAATCGCAGAGCTTTTCTATTATTGATAGGGAAATTAGGTCTATTATGTATGTTAG CTGGTAGACTTTTTCACTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MLYQSVIFYFIILLSGVLNFILFNLRIDSTAFPDVEIVVVFCAAFYYGASLFSIFTYGLIIDLFHCTNFGITSLVLIITF LVFTAIQKNFKLLDYCNSYIVCLMYLMLFTSLKLFLIAIYDHININYQILIFKILTSSLCYFPLSKIFQYIFRNLTLSDV E
Sequences:
>Translated_161_residues MLYQSVIFYFIILLSGVLNFILFNLRIDSTAFPDVEIVVVFCAAFYYGASLFSIFTYGLIIDLFHCTNFGITSLVLIITF LVFTAIQKNFKLLDYCNSYIVCLMYLMLFTSLKLFLIAIYDHININYQILIFKILTSSLCYFPLSKIFQYIFRNLTLSDV E >Mature_161_residues MLYQSVIFYFIILLSGVLNFILFNLRIDSTAFPDVEIVVVFCAAFYYGASLFSIFTYGLIIDLFHCTNFGITSLVLIITF LVFTAIQKNFKLLDYCNSYIVCLMYLMLFTSLKLFLIAIYDHININYQILIFKILTSSLCYFPLSKIFQYIFRNLTLSDV E
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18771; Mature: 18771
Theoretical pI: Translated: 6.47; Mature: 6.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYQSVIFYFIILLSGVLNFILFNLRIDSTAFPDVEIVVVFCAAFYYGASLFSIFTYGLI CHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IDLFHCTNFGITSLVLIITFLVFTAIQKNFKLLDYCNSYIVCLMYLMLFTSLKLFLIAIY HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DHININYQILIFKILTSSLCYFPLSKIFQYIFRNLTLSDVE HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLYQSVIFYFIILLSGVLNFILFNLRIDSTAFPDVEIVVVFCAAFYYGASLFSIFTYGLI CHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IDLFHCTNFGITSLVLIITFLVFTAIQKNFKLLDYCNSYIVCLMYLMLFTSLKLFLIAIY HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DHININYQILIFKILTSSLCYFPLSKIFQYIFRNLTLSDVE HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA