Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189184486

Identifier: 189184486

GI number: 189184486

Start: 1610250

End: 1610735

Strand: Reverse

Name: 189184486

Synonym: OTT_1579

Alternate gene names: NA

Gene position: 1610735-1610250 (Counterclockwise)

Preceding gene: 189184487

Following gene: 189184485

Centisome position: 80.18

GC content: 23.66

Gene sequence:

>486_bases
ATGCTTTATCAGTCGGTAATTTTTTATTTTATAATTCTACTTTCTGGTGTACTTAATTTTATTTTATTTAATTTAAGAAT
CGATAGTACTGCTTTTCCAGATGTTGAAATTGTGGTTGTTTTTTGTGCTGCATTTTATTATGGAGCATCACTGTTTTCGA
TTTTTACATATGGTCTAATAATAGATCTTTTTCATTGCACTAATTTTGGCATCACATCTCTAGTTCTTATAATTACTTTT
TTAGTATTTACTGCTATACAAAAGAATTTTAAATTATTGGATTATTGTAATAGTTATATTGTTTGCTTAATGTATCTAAT
GTTATTTACTAGTTTAAAATTATTTCTAATTGCTATTTATGATCATATAAACATTAATTATCAGATTCTAATTTTCAAAA
TTCTAACTAGCAGCTTGTGTTATTTTCCTTTAAGCAAAATTTTCCAATATATTTTTCGTAATTTAACACTCAGTGATGTT
GAATAA

Upstream 100 bases:

>100_bases
CGATAATTGCTTCTACGCTTCTTGGGATTGGACTAGTTATGAATAGTTATGTCAATAAAGACGTTGATATAGTTAAATCG
CATTATTTATCATAAAAATT

Downstream 100 bases:

>100_bases
CAAAGTACATCAAAACAGATTGATTAATCGCAGAGCTTTTCTATTATTGATAGGGAAATTAGGTCTATTATGTATGTTAG
CTGGTAGACTTTTTCACTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MLYQSVIFYFIILLSGVLNFILFNLRIDSTAFPDVEIVVVFCAAFYYGASLFSIFTYGLIIDLFHCTNFGITSLVLIITF
LVFTAIQKNFKLLDYCNSYIVCLMYLMLFTSLKLFLIAIYDHININYQILIFKILTSSLCYFPLSKIFQYIFRNLTLSDV
E

Sequences:

>Translated_161_residues
MLYQSVIFYFIILLSGVLNFILFNLRIDSTAFPDVEIVVVFCAAFYYGASLFSIFTYGLIIDLFHCTNFGITSLVLIITF
LVFTAIQKNFKLLDYCNSYIVCLMYLMLFTSLKLFLIAIYDHININYQILIFKILTSSLCYFPLSKIFQYIFRNLTLSDV
E
>Mature_161_residues
MLYQSVIFYFIILLSGVLNFILFNLRIDSTAFPDVEIVVVFCAAFYYGASLFSIFTYGLIIDLFHCTNFGITSLVLIITF
LVFTAIQKNFKLLDYCNSYIVCLMYLMLFTSLKLFLIAIYDHININYQILIFKILTSSLCYFPLSKIFQYIFRNLTLSDV
E

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18771; Mature: 18771

Theoretical pI: Translated: 6.47; Mature: 6.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYQSVIFYFIILLSGVLNFILFNLRIDSTAFPDVEIVVVFCAAFYYGASLFSIFTYGLI
CHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IDLFHCTNFGITSLVLIITFLVFTAIQKNFKLLDYCNSYIVCLMYLMLFTSLKLFLIAIY
HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DHININYQILIFKILTSSLCYFPLSKIFQYIFRNLTLSDVE
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLYQSVIFYFIILLSGVLNFILFNLRIDSTAFPDVEIVVVFCAAFYYGASLFSIFTYGLI
CHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IDLFHCTNFGITSLVLIITFLVFTAIQKNFKLLDYCNSYIVCLMYLMLFTSLKLFLIAIY
HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DHININYQILIFKILTSSLCYFPLSKIFQYIFRNLTLSDVE
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA