Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189184483

Identifier: 189184483

GI number: 189184483

Start: 1606140

End: 1606562

Strand: Reverse

Name: 189184483

Synonym: OTT_1576

Alternate gene names: NA

Gene position: 1606562-1606140 (Counterclockwise)

Preceding gene: 189184485

Following gene: 189184480

Centisome position: 79.97

GC content: 24.35

Gene sequence:

>423_bases
ATGACCTACATATCTGAAATATATCTACTATTAGCAAGTAATATTTTTGCCTCTAATTTTATTTTTAGCATTGAATCAGA
ATATGTTTTTAGTGCCATGAGACATTTTGGCAACTATCAATTACATTTAGTAGTAATATCTATTATAGCTTCATTGTTTT
GTGTTGGTAGCATAAATTATTTTTTAGGCGAACTATGCTATAAAATATATCTTTACTATCAAAATCCTAATCTAATTGCA
AGATATAATAAATTATTTACAAGATTTAATGAGCATTGGAAACTAATATTATTATTAACTCTTGTTCCAATAATAGGAAA
CACAATAATTTTTGTAGCTGGTTTTCTACATAACTCTTATGCTAAAAATATTAGCGCATTTATAACAATAAAAACACTCT
ATTATTTGTTACCAATATTTTAG

Upstream 100 bases:

>100_bases
AAAACTAGAAATATTTTTATAATCGAAAGTAAGAATAATTATTTTATCATTTTAATATATAAGTGTATAATGATTTAAAA
ATATATCTGCATCGTTATCA

Downstream 100 bases:

>100_bases
TTATCTAACCTAGGGTCAATATAAGTGATAGATAAAATAATGATAAAAAAAATAATCGTAGGTTAGCAGGAGAAAGAGTT
ATGAATAAAAACATTATTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MTYISEIYLLLASNIFASNFIFSIESEYVFSAMRHFGNYQLHLVVISIIASLFCVGSINYFLGELCYKIYLYYQNPNLIA
RYNKLFTRFNEHWKLILLLTLVPIIGNTIIFVAGFLHNSYAKNISAFITIKTLYYLLPIF

Sequences:

>Translated_140_residues
MTYISEIYLLLASNIFASNFIFSIESEYVFSAMRHFGNYQLHLVVISIIASLFCVGSINYFLGELCYKIYLYYQNPNLIA
RYNKLFTRFNEHWKLILLLTLVPIIGNTIIFVAGFLHNSYAKNISAFITIKTLYYLLPIF
>Mature_139_residues
TYISEIYLLLASNIFASNFIFSIESEYVFSAMRHFGNYQLHLVVISIIASLFCVGSINYFLGELCYKIYLYYQNPNLIAR
YNKLFTRFNEHWKLILLLTLVPIIGNTIIFVAGFLHNSYAKNISAFITIKTLYYLLPIF

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16354; Mature: 16222

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYISEIYLLLASNIFASNFIFSIESEYVFSAMRHFGNYQLHLVVISIIASLFCVGSINY
CCHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
FLGELCYKIYLYYQNPNLIARYNKLFTRFNEHWKLILLLTLVPIIGNTIIFVAGFLHNSY
HHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
AKNISAFITIKTLYYLLPIF
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TYISEIYLLLASNIFASNFIFSIESEYVFSAMRHFGNYQLHLVVISIIASLFCVGSINY
CHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
FLGELCYKIYLYYQNPNLIARYNKLFTRFNEHWKLILLLTLVPIIGNTIIFVAGFLHNSY
HHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
AKNISAFITIKTLYYLLPIF
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA