| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184461
Identifier: 189184461
GI number: 189184461
Start: 1582650
End: 1582811
Strand: Reverse
Name: 189184461
Synonym: OTT_1554
Alternate gene names: NA
Gene position: 1582811-1582650 (Counterclockwise)
Preceding gene: 189184464
Following gene: 189184460
Centisome position: 78.79
GC content: 30.86
Gene sequence:
>162_bases ATGGAAATGATACAAATATTACGTAGCCAAAATAAAACAGAATTATTACTGATCAAGCTTTTTGATAGATTCCATAACAT TACAACTATATGCATCAAACCCCCTCAAAAAAGACAAGAAATCATACTAGAAACGCAGCAAGAATTTATACCTCTTGCCT AA
Upstream 100 bases:
>100_bases TAGAAGACCAATTTTTCCTATAGTACATCTTATAATCAATAATATTGCAGAGCAGGTTTCAGACTTCACAAATGTTAGAA ATAATAAGAAAATTAGTGCT
Downstream 100 bases:
>100_bases GTACCTTAAATTACAAGAAGTTGCCATAGAGCTAAATAAATACTGTAAGCTTTATGCTAGCTAATAAACTATAATGTAGT GAATTGCAGAAATTAAAATT
Product: RelA/SpoT-related protein
Products: NA
Alternate protein names: SpoT-Like PpGpp Hydrolase
Number of amino acids: Translated: 53; Mature: 53
Protein sequence:
>53_residues MEMIQILRSQNKTELLLIKLFDRFHNITTICIKPPQKRQEIILETQQEFIPLA
Sequences:
>Translated_53_residues MEMIQILRSQNKTELLLIKLFDRFHNITTICIKPPQKRQEIILETQQEFIPLA >Mature_53_residues MEMIQILRSQNKTELLLIKLFDRFHNITTICIKPPQKRQEIILETQQEFIPLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6366; Mature: 6366
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEMIQILRSQNKTELLLIKLFDRFHNITTICIKPPQKRQEIILETQQEFIPLA CHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MEMIQILRSQNKTELLLIKLFDRFHNITTICIKPPQKRQEIILETQQEFIPLA CHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA