Click here to switch to the map view.

The map label for this gene is 189184464

Identifier: 189184464

GI number: 189184464

Start: 1585345

End: 1585743

Strand: Reverse

Name: 189184464

Synonym: OTT_1557

Alternate gene names: NA

Gene position: 1585743-1585345 (Counterclockwise)

Preceding gene: 189184465

Following gene: 189184461

Centisome position: 78.93

GC content: 36.84

Gene sequence:

>399_bases
ATGGATGAGGTTAACCTTAAAATTAAAGAACGTAAAATGCGTACTCGACGTCTTATCGAAATGGGTGGATTAGTTGCTAA
AGCTAAGCTTGATCACCTATCAGCAAATACTTTATTTGGTGCAATTGTTTCACTAAAAGAAACTTTAACACAACATCCAA
ATGTTCAGGATCATTGGACTACAATAGGTAAAGATATTTTTGATAAAGAACAGCAAAATAAAGCTGCTGTGATTTTAAAA
TTTGCCTCTGAACCAGACGAAGACACTAAGCGCCACATTCGCCTTCATGGCTTAAAATGGAACAGTTTTCGTCAAGAATG
GTGCGGCCATGTTAAGGACATTGAGGCCTTAAAGAATGGCCTTCTCAATGTTCAGTATAGTATAGAACTTGTAGTGTGA

Upstream 100 bases:

>100_bases
GATATATTCTTGCCTGATTTTTTTATCTTTCTGAATTACTAACATGGCAAATCTTATGTAGCAAAAAATTACTCTTCAAC
AAAAAAAGGCTAGGCTAATC

Downstream 100 bases:

>100_bases
TATAAAGCATCTAATAGAAGTAGCATACAACACAACACATCAAAGGTAAGATTTTGTGTTGTATATTTCTTATTATTTTA
CGCTATTTTTTAAATTTAAT

Product: putative conjugative transfer protein TraD

Products: NA

Alternate protein names: Conjugal Transfer Protein TraD; Conjugative Transfer Protein

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MDEVNLKIKERKMRTRRLIEMGGLVAKAKLDHLSANTLFGAIVSLKETLTQHPNVQDHWTTIGKDIFDKEQQNKAAVILK
FASEPDEDTKRHIRLHGLKWNSFRQEWCGHVKDIEALKNGLLNVQYSIELVV

Sequences:

>Translated_132_residues
MDEVNLKIKERKMRTRRLIEMGGLVAKAKLDHLSANTLFGAIVSLKETLTQHPNVQDHWTTIGKDIFDKEQQNKAAVILK
FASEPDEDTKRHIRLHGLKWNSFRQEWCGHVKDIEALKNGLLNVQYSIELVV
>Mature_132_residues
MDEVNLKIKERKMRTRRLIEMGGLVAKAKLDHLSANTLFGAIVSLKETLTQHPNVQDHWTTIGKDIFDKEQQNKAAVILK
FASEPDEDTKRHIRLHGLKWNSFRQEWCGHVKDIEALKNGLLNVQYSIELVV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15229; Mature: 15229

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEVNLKIKERKMRTRRLIEMGGLVAKAKLDHLSANTLFGAIVSLKETLTQHPNVQDHWT
CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHH
TIGKDIFDKEQQNKAAVILKFASEPDEDTKRHIRLHGLKWNSFRQEWCGHVKDIEALKNG
HHHHHHHCHHCCCCEEEEEEECCCCCHHHHHHEEEECCCCHHHHHHHCCCHHHHHHHHCC
LLNVQYSIELVV
CEEEEEEEEEEC
>Mature Secondary Structure
MDEVNLKIKERKMRTRRLIEMGGLVAKAKLDHLSANTLFGAIVSLKETLTQHPNVQDHWT
CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHH
TIGKDIFDKEQQNKAAVILKFASEPDEDTKRHIRLHGLKWNSFRQEWCGHVKDIEALKNG
HHHHHHHCHHCCCCEEEEEEECCCCCHHHHHHEEEECCCCHHHHHHHCCCHHHHHHHHCC
LLNVQYSIELVV
CEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA