Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189184460

Identifier: 189184460

GI number: 189184460

Start: 1581602

End: 1582480

Strand: Reverse

Name: 189184460

Synonym: OTT_1553

Alternate gene names: NA

Gene position: 1582480-1581602 (Counterclockwise)

Preceding gene: 189184461

Following gene: 189184457

Centisome position: 78.77

GC content: 28.67

Gene sequence:

>879_bases
ATGCATTTATCAAGATTTTTAGATCCAAAGAATGATGTAGCATTTAAAAAGATATTTGGATCAGAAAAAAACAAGGACAT
ACTAATACATTTTCTGAACGATATATTGTTGTTTGAAGGGAATAGAGAAATAACAGAAGTAGAGTTTTTAGGAACGATAT
TAGATGCAGACATAGCGTCTAAAAAAGAATCAATAGTAGATGTTTTGTGTAAAGATAAAAACGGTGCGCAATATATAATA
GAAATGCAAGTAGATCCTACACAAGGATTTGAAAAAAGAGCACAGTATTATGCCGAAAAAGCATATGGTAGGCAACCAAA
TAGAGGAAAGGAAGGAAAATACTCAGACCTAAAGGAAGTTATATTTATAGCTATAGCAGATTATAAATTGTTTCCAAATA
AAGAAGACTATATATCAAGGCATGTAATACTGGATAAAAAAACATATGAGCATGATTTAAAAGACTTTTCATTTACCTTT
ATAGAATTACCAAAATTTAAAAAAAATAGAGTGGAAGAGTTAAATGATATAACAGAGAAGTGGTGCTATTTTTTTAAACA
TGCAAAAGAAACAACATTAGATGGATATAATAAAATAATAGGTGAAGATTTAATAATAAAAAGAGCTTATGAAGCATTAG
ATCAGTTTAACTGGAGCGAAGATGAACTAATAACCTATGAACAAGAGTTAAAGCGTATATGGGATAATAAAGCAGTAGAA
GATTATAAACTCGAACGCGCTAAAGCTGAAGGCAAAGCCGAAGCAAAAAAAGCTTTTGCAATAAAATTATTGAAATCTGA
ATTATCAGTTGAGACAATTGCTGAATATACGGATTTATCAATACAAGAAGTATTAAATTTAAAAAATAGTGTAAAATAA

Upstream 100 bases:

>100_bases
TATAATGTAGTGAATTGCAGAAATTAAAATTCAATAAGAGAATGTTCATGTAAGTTATTTTGTTGTATAATTTAAAAAGA
ATAGAAAATATGAACAACAT

Downstream 100 bases:

>100_bases
TAATGAATATACAACACAAAATCTTACTTTTGATGTGTTGTATGCTACTTCTATTAGATGCTTTATATCACACTACAAGT
TCTATACTATACTGAACATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MHLSRFLDPKNDVAFKKIFGSEKNKDILIHFLNDILLFEGNREITEVEFLGTILDADIASKKESIVDVLCKDKNGAQYII
EMQVDPTQGFEKRAQYYAEKAYGRQPNRGKEGKYSDLKEVIFIAIADYKLFPNKEDYISRHVILDKKTYEHDLKDFSFTF
IELPKFKKNRVEELNDITEKWCYFFKHAKETTLDGYNKIIGEDLIIKRAYEALDQFNWSEDELITYEQELKRIWDNKAVE
DYKLERAKAEGKAEAKKAFAIKLLKSELSVETIAEYTDLSIQEVLNLKNSVK

Sequences:

>Translated_292_residues
MHLSRFLDPKNDVAFKKIFGSEKNKDILIHFLNDILLFEGNREITEVEFLGTILDADIASKKESIVDVLCKDKNGAQYII
EMQVDPTQGFEKRAQYYAEKAYGRQPNRGKEGKYSDLKEVIFIAIADYKLFPNKEDYISRHVILDKKTYEHDLKDFSFTF
IELPKFKKNRVEELNDITEKWCYFFKHAKETTLDGYNKIIGEDLIIKRAYEALDQFNWSEDELITYEQELKRIWDNKAVE
DYKLERAKAEGKAEAKKAFAIKLLKSELSVETIAEYTDLSIQEVLNLKNSVK
>Mature_292_residues
MHLSRFLDPKNDVAFKKIFGSEKNKDILIHFLNDILLFEGNREITEVEFLGTILDADIASKKESIVDVLCKDKNGAQYII
EMQVDPTQGFEKRAQYYAEKAYGRQPNRGKEGKYSDLKEVIFIAIADYKLFPNKEDYISRHVILDKKTYEHDLKDFSFTF
IELPKFKKNRVEELNDITEKWCYFFKHAKETTLDGYNKIIGEDLIIKRAYEALDQFNWSEDELITYEQELKRIWDNKAVE
DYKLERAKAEGKAEAKKAFAIKLLKSELSVETIAEYTDLSIQEVLNLKNSVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34230; Mature: 34230

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLSRFLDPKNDVAFKKIFGSEKNKDILIHFLNDILLFEGNREITEVEFLGTILDADIAS
CCCHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHH
KKESIVDVLCKDKNGAQYIIEMQVDPTQGFEKRAQYYAEKAYGRQPNRGKEGKYSDLKEV
HHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
IFIAIADYKLFPNKEDYISRHVILDKKTYEHDLKDFSFTFIELPKFKKNRVEELNDITEK
HHHHEECCEECCCCHHHHHHHEEECCHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHH
WCYFFKHAKETTLDGYNKIIGEDLIIKRAYEALDQFNWSEDELITYEQELKRIWDNKAVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHH
DYKLERAKAEGKAEAKKAFAIKLLKSELSVETIAEYTDLSIQEVLNLKNSVK
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
>Mature Secondary Structure
MHLSRFLDPKNDVAFKKIFGSEKNKDILIHFLNDILLFEGNREITEVEFLGTILDADIAS
CCCHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHH
KKESIVDVLCKDKNGAQYIIEMQVDPTQGFEKRAQYYAEKAYGRQPNRGKEGKYSDLKEV
HHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
IFIAIADYKLFPNKEDYISRHVILDKKTYEHDLKDFSFTFIELPKFKKNRVEELNDITEK
HHHHEECCEECCCCHHHHHHHEEECCHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHH
WCYFFKHAKETTLDGYNKIIGEDLIIKRAYEALDQFNWSEDELITYEQELKRIWDNKAVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHH
DYKLERAKAEGKAEAKKAFAIKLLKSELSVETIAEYTDLSIQEVLNLKNSVK
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA