| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184429
Identifier: 189184429
GI number: 189184429
Start: 1551687
End: 1552484
Strand: Reverse
Name: 189184429
Synonym: OTT_1522
Alternate gene names: NA
Gene position: 1552484-1551687 (Counterclockwise)
Preceding gene: 189184430
Following gene: 189184427
Centisome position: 77.28
GC content: 33.71
Gene sequence:
>798_bases TTGCATAACGGAGTAAGTAATATAAGCAGCTCATACGTAGCTATGACAAGGCATATAGAGAACTTGCAGCTATATTGCAA TAAGAAAGCTACTGCAAGCATTAACAGCTTAATAAATCAGCTTAGCAGACCAAATGATAAATCAGCTAGCATAACTCTAA AAACTGCTCATGATTTGGAGAAAGAACGGACAAAGCCAACTGTTTTTAGTAAAGTTGAAAACTGGTTTAAGTCTATAATC AATGATATCAATGATAGATCTCATGTGAATGAAGAATATTATTACTTTACCGCTAAACCAGAGGAAGAAGCTAAAGTAGA AAAAGTCCAGCTCAAAGATATTTCTACTCCATTATTTATGCACATCAAAGAACAAAGACAATATGATTATGATGTAACCA TTTTGTCTGCAGAAGGAAAAGCGATATCAAGTTTTCAGGAAGCTGGCATTGATAGCAGAATGGTATATAGCTCAAATGTA AATAATTTGAAGTACTATCAACCATTTCAAGGAGAAAAGATTCTTATAGCTGCAAATAATGATAAACAGAATAAAGAGTA TGCAAGTACTATAAACGAGGCTGCAAAAGCATTAAAAAGCAAAGGAGCAATCACTAGCATCGTAGTTCCTTCAGAAGGTG AAGATTTTAACGAAATGCTAAAAAATAAAGGAGCCACAGCTGTTAAGGAGCTTATGATACCTGAAATCATGAAGTTAATT AATACTCAGAACATAAAAACAGAGTCTGAACAAGTGGTGAAAACTGACATAGCTCCAAAAATTGGAGTTAGGAGATAA
Upstream 100 bases:
>100_bases GAAAAGAGGTGAGTTTTGATTCGGTAAAATACAATTTAAACATGGCTATGCAAGTACTGTTTATAAGGTCCAGGGAGCTT CTGTAAAAGATGTATACGTT
Downstream 100 bases:
>100_bases TGTAATGTATAAAAAGTTATAACTAAATATTGTACTTTGTAGGCTTTTTAGATTATACATTTTATACTTTCCATTATCCA AACTGTAGTTTTTATAGCTC
Product: putative conjugative transfer protein TraA
Products: NA
Alternate protein names: Conjugative Transfer Protein TraI; MobA/MobL Family Protein; Conjugal Transfer Protein TraA; Conjugative Transfer Protein
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MHNGVSNISSSYVAMTRHIENLQLYCNKKATASINSLINQLSRPNDKSASITLKTAHDLEKERTKPTVFSKVENWFKSII NDINDRSHVNEEYYYFTAKPEEEAKVEKVQLKDISTPLFMHIKEQRQYDYDVTILSAEGKAISSFQEAGIDSRMVYSSNV NNLKYYQPFQGEKILIAANNDKQNKEYASTINEAAKALKSKGAITSIVVPSEGEDFNEMLKNKGATAVKELMIPEIMKLI NTQNIKTESEQVVKTDIAPKIGVRR
Sequences:
>Translated_265_residues MHNGVSNISSSYVAMTRHIENLQLYCNKKATASINSLINQLSRPNDKSASITLKTAHDLEKERTKPTVFSKVENWFKSII NDINDRSHVNEEYYYFTAKPEEEAKVEKVQLKDISTPLFMHIKEQRQYDYDVTILSAEGKAISSFQEAGIDSRMVYSSNV NNLKYYQPFQGEKILIAANNDKQNKEYASTINEAAKALKSKGAITSIVVPSEGEDFNEMLKNKGATAVKELMIPEIMKLI NTQNIKTESEQVVKTDIAPKIGVRR >Mature_265_residues MHNGVSNISSSYVAMTRHIENLQLYCNKKATASINSLINQLSRPNDKSASITLKTAHDLEKERTKPTVFSKVENWFKSII NDINDRSHVNEEYYYFTAKPEEEAKVEKVQLKDISTPLFMHIKEQRQYDYDVTILSAEGKAISSFQEAGIDSRMVYSSNV NNLKYYQPFQGEKILIAANNDKQNKEYASTINEAAKALKSKGAITSIVVPSEGEDFNEMLKNKGATAVKELMIPEIMKLI NTQNIKTESEQVVKTDIAPKIGVRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29991; Mature: 29991
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHNGVSNISSSYVAMTRHIENLQLYCNKKATASINSLINQLSRPNDKSASITLKTAHDLE CCCCHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHCCCCCCCCEEEEECHHHHH KERTKPTVFSKVENWFKSIINDINDRSHVNEEYYYFTAKPEEEAKVEKVQLKDISTPLFM HHHCCCHHHHHHHHHHHHHHHHCCCHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCHHHH HIKEQRQYDYDVTILSAEGKAISSFQEAGIDSRMVYSSNVNNLKYYQPFQGEKILIAANN HHHHHCCCCCCEEEEECCCCHHHHHHHCCCCCEEEECCCCCCCEEECCCCCCEEEEEECC DKQNKEYASTINEAAKALKSKGAITSIVVPSEGEDFNEMLKNKGATAVKELMIPEIMKLI CCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHCCCHHHHHHHHHHHHHHHH NTQNIKTESEQVVKTDIAPKIGVRR CCCCCCCCHHHHHHHHCCCCCCCCC >Mature Secondary Structure MHNGVSNISSSYVAMTRHIENLQLYCNKKATASINSLINQLSRPNDKSASITLKTAHDLE CCCCHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHCCCCCCCCEEEEECHHHHH KERTKPTVFSKVENWFKSIINDINDRSHVNEEYYYFTAKPEEEAKVEKVQLKDISTPLFM HHHCCCHHHHHHHHHHHHHHHHCCCHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCHHHH HIKEQRQYDYDVTILSAEGKAISSFQEAGIDSRMVYSSNVNNLKYYQPFQGEKILIAANN HHHHHCCCCCCEEEEECCCCHHHHHHHCCCCCEEEECCCCCCCEEECCCCCCEEEEEECC DKQNKEYASTINEAAKALKSKGAITSIVVPSEGEDFNEMLKNKGATAVKELMIPEIMKLI CCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHCCCHHHHHHHHHHHHHHHH NTQNIKTESEQVVKTDIAPKIGVRR CCCCCCCCHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA