Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189184427

Identifier: 189184427

GI number: 189184427

Start: 1550311

End: 1550709

Strand: Reverse

Name: 189184427

Synonym: OTT_1520

Alternate gene names: NA

Gene position: 1550709-1550311 (Counterclockwise)

Preceding gene: 189184429

Following gene: 189184426

Centisome position: 77.19

GC content: 33.33

Gene sequence:

>399_bases
ATGGTGATAGAAATGTTAATTCAGGATAAGAAAAAATTAGAATCTGAAAGTGTTAAAATTGCAAAAGTTCAAAACTTGTA
TGAACTATCAAGTAAGATACATGGTTATGAGATAGATACGAGCTCAAGCGCAGAAGTTGAAATAGTAAAAAAGTATCTTG
AAAATCGTGGTATTACTTTTGACAAAAGCACTGCAAGTTCAGACTTAAAAGCCAGTATACTGTTTGATACTCAAACGAGA
AAAAATTATCCAGCATTGACAGCGTTTGCAAGAAATTCAAAAGGAGAAATTACCGGAGTACAGGCTGTATATCTAAATTT
GGCAGGAGATAAGGCAAATATTTCAACTAGCAGAAGATCATCAGGTAAAACCAGCAAATCGTTCATAACGCAAGATTAG

Upstream 100 bases:

>100_bases
ATATTATTAATTATATTTAAAATAATTATAATTACTCTTAAGTAAATATAACAAAAAATAAATATTTAGCAATACTTATT
TTCTGAGTAAATTAAAAAAT

Downstream 100 bases:

>100_bases
GATAAGTGGAAGCATGAAAAGCATAATAAAAAAGGTCTACAAGAGATAATGTACAATTATAATTATGATATATTAAATAT
AGTTTTAATGAATAGCCATT

Product: putative conjugative transfer protein TraI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MVIEMLIQDKKKLESESVKIAKVQNLYELSSKIHGYEIDTSSSAEVEIVKKYLENRGITFDKSTASSDLKASILFDTQTR
KNYPALTAFARNSKGEITGVQAVYLNLAGDKANISTSRRSSGKTSKSFITQD

Sequences:

>Translated_132_residues
MVIEMLIQDKKKLESESVKIAKVQNLYELSSKIHGYEIDTSSSAEVEIVKKYLENRGITFDKSTASSDLKASILFDTQTR
KNYPALTAFARNSKGEITGVQAVYLNLAGDKANISTSRRSSGKTSKSFITQD
>Mature_132_residues
MVIEMLIQDKKKLESESVKIAKVQNLYELSSKIHGYEIDTSSSAEVEIVKKYLENRGITFDKSTASSDLKASILFDTQTR
KNYPALTAFARNSKGEITGVQAVYLNLAGDKANISTSRRSSGKTSKSFITQD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14618; Mature: 14618

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIEMLIQDKKKLESESVKIAKVQNLYELSSKIHGYEIDTSSSAEVEIVKKYLENRGITF
CEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHCCCEE
DKSTASSDLKASILFDTQTRKNYPALTAFARNSKGEITGVQAVYLNLAGDKANISTSRRS
ECCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCEEEEEEEEEEECCCCCCCCCCCCC
SGKTSKSFITQD
CCCCCCCCCCCC
>Mature Secondary Structure
MVIEMLIQDKKKLESESVKIAKVQNLYELSSKIHGYEIDTSSSAEVEIVKKYLENRGITF
CEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHCCCEE
DKSTASSDLKASILFDTQTRKNYPALTAFARNSKGEITGVQAVYLNLAGDKANISTSRRS
ECCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCEEEEEEEEEEECCCCCCCCCCCCC
SGKTSKSFITQD
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA