Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189184409

Identifier: 189184409

GI number: 189184409

Start: 1530242

End: 1530718

Strand: Reverse

Name: 189184409

Synonym: OTT_1502

Alternate gene names: NA

Gene position: 1530718-1530242 (Counterclockwise)

Preceding gene: 189184410

Following gene: 189184408

Centisome position: 76.19

GC content: 28.3

Gene sequence:

>477_bases
ATGAATATTAGAATTTTGAGATTTATCATAGGGTTTATTGCTTTGGTAAACGTTAATAATATATATGCAGTAGAATATAC
ATTACAAGATGATGAGCTGCTTAAGCTTGAGATTTCTGATAGTGGGCCAACAAGAATTAATCTTAAAGATGAAAAAATTA
ATGATATTCTTATGTATCCTCAAAACACAGTTGAAGTTATAGTTCATGAGTCTGGATGTTTGTTTATTGCTCCACGAGAA
GAAGGAAACAAAGTTTATTTAACGGTAATAGGAGAATATAAAACAATTCAAGATTTAATGTTAACTTTTACTCCAAAAAC
TCCAAATCCTGTAATGCTTGTTAATGCTGCTACAAAAATAGAGGAAAAGGATAATTCAAAACAAAACAATACCAATTTGT
TCAGTAATGACCTTAATACAAAAGAATTAACAGCGAAACCTTCTAAAAAACAAAGTAGAAATACTAAGGAAAAATAA

Upstream 100 bases:

>100_bases
GTAAAGATATAGCTGTCGATAAGACTTACCTTTTGACTTACAAGCAAACTCCTAATTACCTTTTATTGTTGACTGGTGTT
AAAGAGAATGGAATAAAAAA

Downstream 100 bases:

>100_bases
AACTGGCTTAAAGTGCTAGTTTTTACTTCAAAAACTGGCAAGCTCAGCATCAAGCTTATTAAAACCATTTCAAAGTAAAA
TTTCATTGATCATGGAATTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MNIRILRFIIGFIALVNVNNIYAVEYTLQDDELLKLEISDSGPTRINLKDEKINDILMYPQNTVEVIVHESGCLFIAPRE
EGNKVYLTVIGEYKTIQDLMLTFTPKTPNPVMLVNAATKIEEKDNSKQNNTNLFSNDLNTKELTAKPSKKQSRNTKEK

Sequences:

>Translated_158_residues
MNIRILRFIIGFIALVNVNNIYAVEYTLQDDELLKLEISDSGPTRINLKDEKINDILMYPQNTVEVIVHESGCLFIAPRE
EGNKVYLTVIGEYKTIQDLMLTFTPKTPNPVMLVNAATKIEEKDNSKQNNTNLFSNDLNTKELTAKPSKKQSRNTKEK
>Mature_158_residues
MNIRILRFIIGFIALVNVNNIYAVEYTLQDDELLKLEISDSGPTRINLKDEKINDILMYPQNTVEVIVHESGCLFIAPRE
EGNKVYLTVIGEYKTIQDLMLTFTPKTPNPVMLVNAATKIEEKDNSKQNNTNLFSNDLNTKELTAKPSKKQSRNTKEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18033; Mature: 18033

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIRILRFIIGFIALVNVNNIYAVEYTLQDDELLKLEISDSGPTRINLKDEKINDILMYP
CCEEHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEECC
QNTVEVIVHESGCLFIAPREEGNKVYLTVIGEYKTIQDLMLTFTPKTPNPVMLVNAATKI
CCEEEEEEECCCEEEEEECCCCCEEEEEEECCCCCCEEEEEEECCCCCCCEEEEECCCCC
EEKDNSKQNNTNLFSNDLNTKELTAKPSKKQSRNTKEK
CCCCCCCCCCCCEECCCCCCCEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MNIRILRFIIGFIALVNVNNIYAVEYTLQDDELLKLEISDSGPTRINLKDEKINDILMYP
CCEEHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEECC
QNTVEVIVHESGCLFIAPREEGNKVYLTVIGEYKTIQDLMLTFTPKTPNPVMLVNAATKI
CCEEEEEEECCCEEEEEECCCCCEEEEEEECCCCCCEEEEEEECCCCCCCEEEEECCCCC
EEKDNSKQNNTNLFSNDLNTKELTAKPSKKQSRNTKEK
CCCCCCCCCCCCEECCCCCCCEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA