| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184408
Identifier: 189184408
GI number: 189184408
Start: 1529548
End: 1529877
Strand: Reverse
Name: 189184408
Synonym: OTT_1501
Alternate gene names: NA
Gene position: 1529877-1529548 (Counterclockwise)
Preceding gene: 189184409
Following gene: 189184407
Centisome position: 76.15
GC content: 33.33
Gene sequence:
>330_bases ATGTTCATATATCAAAAATCTCGACTAAATATGCTAAAACCTACATTTGGAATACAGTGGAATAATGTAGTTGTAGGGCT GTTAATTATTATAATTACTGCTTGTGTTTTTTCTTTTGAGCCAGCATTAGCTGATACTCTTGAAGGGCAGCTTAATAAAA TAGACGGACTTTTTAGTGGAAAACTAAAAACAATAGGTATATCAAGTGCAACTATTCTATCATCTATTTGGGCTGTAGCA AGAGGGAATATAAAGCTTGCAGGAGTAATGGTAGCAATTGGTGTTATTTTAGGCTTTTACCTAGTGAATTGCCGGTGGTA TGAAAATTAA
Upstream 100 bases:
>100_bases TGGAAGGAACACTGAAACTCACTCCAAAGTAAAATTTTATTCAACGTGGAATTCACTAGCACTAGGAGAATAATGCAAAA TTTACTAATAAGCAATAACA
Downstream 100 bases:
>100_bases TTGATAAGGTAGAAACATTAACATTCAAAAAGCGGAGGAATAGTTGAACAGGATAATTCAGACAATAATAATACAAAAGA AGAAGATTTAGAGCTAAATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MFIYQKSRLNMLKPTFGIQWNNVVVGLLIIIITACVFSFEPALADTLEGQLNKIDGLFSGKLKTIGISSATILSSIWAVA RGNIKLAGVMVAIGVILGFYLVNCRWYEN
Sequences:
>Translated_109_residues MFIYQKSRLNMLKPTFGIQWNNVVVGLLIIIITACVFSFEPALADTLEGQLNKIDGLFSGKLKTIGISSATILSSIWAVA RGNIKLAGVMVAIGVILGFYLVNCRWYEN >Mature_109_residues MFIYQKSRLNMLKPTFGIQWNNVVVGLLIIIITACVFSFEPALADTLEGQLNKIDGLFSGKLKTIGISSATILSSIWAVA RGNIKLAGVMVAIGVILGFYLVNCRWYEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11983; Mature: 11983
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFIYQKSRLNMLKPTFGIQWNNVVVGLLIIIITACVFSFEPALADTLEGQLNKIDGLFSG CCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHCC KLKTIGISSATILSSIWAVARGNIKLAGVMVAIGVILGFYLVNCRWYEN CEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCEEECC >Mature Secondary Structure MFIYQKSRLNMLKPTFGIQWNNVVVGLLIIIITACVFSFEPALADTLEGQLNKIDGLFSG CCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHCC KLKTIGISSATILSSIWAVARGNIKLAGVMVAIGVILGFYLVNCRWYEN CEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA