| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184359
Identifier: 189184359
GI number: 189184359
Start: 1485052
End: 1485552
Strand: Reverse
Name: 189184359
Synonym: OTT_1452
Alternate gene names: NA
Gene position: 1485552-1485052 (Counterclockwise)
Preceding gene: 189184360
Following gene: 189184357
Centisome position: 73.95
GC content: 30.34
Gene sequence:
>501_bases ATGAGTATTTTGAAATCACTTTTACAACCGTGTTATGCTGTTATATTAGCATTCGTTGTATTATCTTCACCATCGATATG TACAGCGAATAATAATGTAAACTTCAATACTTCTAAAGTTAGTATTGATACTTCACAATTTTATCTAAAACTTTCATCTG GTATTAATACTGACTATGGTACATTAGAAGCAGGGATTGGTTATAGACAAGCTCGGCATAGAATGGATGTAAGATTAGGA TTGATATGTTCTAATTACTCTATATATGATTTTGCTCAAGGAAATTATTATTACAATATAATTGAAGGTAATAAAGCATC AATTTTTATTACAGGTGGACTACTACTATCTCTCAGTGGTTGTCTTGCTATTAATGTAGACTTGGGAGTTGGTACAACAA TAAATTTATTAAGAGATATATATTTAGATATTGAATGTAGCACAATGAACTATAGACCACTTCCTATTCATACACGTTTT GGGTTGCGGTTTCACCTTTAA
Upstream 100 bases:
>100_bases TTTCAACAGACAACCATACATTAATTTCAAAAAATAAAGTTGACAAAAAGTATAATTAACATTAAGTTTATAAAAAATAT TAAATTAGATAGATACTGCT
Downstream 100 bases:
>100_bases TTGCTAAGTTCAAGTCTAATAGTTAGTAATGATTAGCTCATTAACAGTGTTTCGTTGTTGATTGATTGAGTATGTGACTG GAATATGAGTGATGAAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MSILKSLLQPCYAVILAFVVLSSPSICTANNNVNFNTSKVSIDTSQFYLKLSSGINTDYGTLEAGIGYRQARHRMDVRLG LICSNYSIYDFAQGNYYYNIIEGNKASIFITGGLLLSLSGCLAINVDLGVGTTINLLRDIYLDIECSTMNYRPLPIHTRF GLRFHL
Sequences:
>Translated_166_residues MSILKSLLQPCYAVILAFVVLSSPSICTANNNVNFNTSKVSIDTSQFYLKLSSGINTDYGTLEAGIGYRQARHRMDVRLG LICSNYSIYDFAQGNYYYNIIEGNKASIFITGGLLLSLSGCLAINVDLGVGTTINLLRDIYLDIECSTMNYRPLPIHTRF GLRFHL >Mature_165_residues SILKSLLQPCYAVILAFVVLSSPSICTANNNVNFNTSKVSIDTSQFYLKLSSGINTDYGTLEAGIGYRQARHRMDVRLGL ICSNYSIYDFAQGNYYYNIIEGNKASIFITGGLLLSLSGCLAINVDLGVGTTINLLRDIYLDIECSTMNYRPLPIHTRFG LRFHL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18425; Mature: 18293
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSILKSLLQPCYAVILAFVVLSSPSICTANNNVNFNTSKVSIDTSQFYLKLSSGINTDYG CHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEEHHHEEEEECCCCCCCCC TLEAGIGYRQARHRMDVRLGLICSNYSIYDFAQGNYYYNIIEGNKASIFITGGLLLSLSG CEECCCCHHHHHHHHCEEEEEEECCCEEEEEECCCEEEEEEECCCEEEEEECCHHEEECC CLAINVDLGVGTTINLLRDIYLDIECSTMNYRPLPIHTRFGLRFHL EEEEEEECCCCCHHHHHHHEEEEEEECCCCCCCCEEEEECCEEEEC >Mature Secondary Structure SILKSLLQPCYAVILAFVVLSSPSICTANNNVNFNTSKVSIDTSQFYLKLSSGINTDYG HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEEHHHEEEEECCCCCCCCC TLEAGIGYRQARHRMDVRLGLICSNYSIYDFAQGNYYYNIIEGNKASIFITGGLLLSLSG CEECCCCHHHHHHHHCEEEEEEECCCEEEEEECCCEEEEEEECCCEEEEEECCHHEEECC CLAINVDLGVGTTINLLRDIYLDIECSTMNYRPLPIHTRFGLRFHL EEEEEEECCCCCHHHHHHHEEEEEEECCCCCCCCEEEEECCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA