Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

Click here to switch to the map view.

The map label for this gene is 189184359

Identifier: 189184359

GI number: 189184359

Start: 1485052

End: 1485552

Strand: Reverse

Name: 189184359

Synonym: OTT_1452

Alternate gene names: NA

Gene position: 1485552-1485052 (Counterclockwise)

Preceding gene: 189184360

Following gene: 189184357

Centisome position: 73.95

GC content: 30.34

Gene sequence:

>501_bases
ATGAGTATTTTGAAATCACTTTTACAACCGTGTTATGCTGTTATATTAGCATTCGTTGTATTATCTTCACCATCGATATG
TACAGCGAATAATAATGTAAACTTCAATACTTCTAAAGTTAGTATTGATACTTCACAATTTTATCTAAAACTTTCATCTG
GTATTAATACTGACTATGGTACATTAGAAGCAGGGATTGGTTATAGACAAGCTCGGCATAGAATGGATGTAAGATTAGGA
TTGATATGTTCTAATTACTCTATATATGATTTTGCTCAAGGAAATTATTATTACAATATAATTGAAGGTAATAAAGCATC
AATTTTTATTACAGGTGGACTACTACTATCTCTCAGTGGTTGTCTTGCTATTAATGTAGACTTGGGAGTTGGTACAACAA
TAAATTTATTAAGAGATATATATTTAGATATTGAATGTAGCACAATGAACTATAGACCACTTCCTATTCATACACGTTTT
GGGTTGCGGTTTCACCTTTAA

Upstream 100 bases:

>100_bases
TTTCAACAGACAACCATACATTAATTTCAAAAAATAAAGTTGACAAAAAGTATAATTAACATTAAGTTTATAAAAAATAT
TAAATTAGATAGATACTGCT

Downstream 100 bases:

>100_bases
TTGCTAAGTTCAAGTCTAATAGTTAGTAATGATTAGCTCATTAACAGTGTTTCGTTGTTGATTGATTGAGTATGTGACTG
GAATATGAGTGATGAAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MSILKSLLQPCYAVILAFVVLSSPSICTANNNVNFNTSKVSIDTSQFYLKLSSGINTDYGTLEAGIGYRQARHRMDVRLG
LICSNYSIYDFAQGNYYYNIIEGNKASIFITGGLLLSLSGCLAINVDLGVGTTINLLRDIYLDIECSTMNYRPLPIHTRF
GLRFHL

Sequences:

>Translated_166_residues
MSILKSLLQPCYAVILAFVVLSSPSICTANNNVNFNTSKVSIDTSQFYLKLSSGINTDYGTLEAGIGYRQARHRMDVRLG
LICSNYSIYDFAQGNYYYNIIEGNKASIFITGGLLLSLSGCLAINVDLGVGTTINLLRDIYLDIECSTMNYRPLPIHTRF
GLRFHL
>Mature_165_residues
SILKSLLQPCYAVILAFVVLSSPSICTANNNVNFNTSKVSIDTSQFYLKLSSGINTDYGTLEAGIGYRQARHRMDVRLGL
ICSNYSIYDFAQGNYYYNIIEGNKASIFITGGLLLSLSGCLAINVDLGVGTTINLLRDIYLDIECSTMNYRPLPIHTRFG
LRFHL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18425; Mature: 18293

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSILKSLLQPCYAVILAFVVLSSPSICTANNNVNFNTSKVSIDTSQFYLKLSSGINTDYG
CHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEEHHHEEEEECCCCCCCCC
TLEAGIGYRQARHRMDVRLGLICSNYSIYDFAQGNYYYNIIEGNKASIFITGGLLLSLSG
CEECCCCHHHHHHHHCEEEEEEECCCEEEEEECCCEEEEEEECCCEEEEEECCHHEEECC
CLAINVDLGVGTTINLLRDIYLDIECSTMNYRPLPIHTRFGLRFHL
EEEEEEECCCCCHHHHHHHEEEEEEECCCCCCCCEEEEECCEEEEC
>Mature Secondary Structure 
SILKSLLQPCYAVILAFVVLSSPSICTANNNVNFNTSKVSIDTSQFYLKLSSGINTDYG
HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEEHHHEEEEECCCCCCCCC
TLEAGIGYRQARHRMDVRLGLICSNYSIYDFAQGNYYYNIIEGNKASIFITGGLLLSLSG
CEECCCCHHHHHHHHCEEEEEEECCCEEEEEECCCEEEEEEECCCEEEEEECCHHEEECC
CLAINVDLGVGTTINLLRDIYLDIECSTMNYRPLPIHTRFGLRFHL
EEEEEEECCCCCHHHHHHHEEEEEEECCCCCCCCEEEEECCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA