| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184357
Identifier: 189184357
GI number: 189184357
Start: 1482821
End: 1483537
Strand: Reverse
Name: 189184357
Synonym: OTT_1450
Alternate gene names: NA
Gene position: 1483537-1482821 (Counterclockwise)
Preceding gene: 189184359
Following gene: 189184356
Centisome position: 73.85
GC content: 27.75
Gene sequence:
>717_bases ATGCATATACAAGTCTTAAGCGCAGCAAAACACTTGTTCTATCGAATGTTTAACCTACGCAAACAAAATAAAGCAACACA AATTTTTTCAGTTTCACAGGAAAAATGGTTTGCTTTTTTTAATGACTTGCACAGTCACACGGAACAAAAAAATTTAATAC AGCTTCTAATAACTCATCTTATAAAGATAAAATCTAATTTAACAATAGATCAGCAAAAAAAGTGTTTAACTGGATATTTA ACTGATCCAAATTACAACTTAACCAGAAAGGAACAAAAATATATTTTAAAATTAACAAATGAAAATGATTTTATTTGGAA TAAGAAAGGTCAAAACTTTCTTGATTTTTGTATGTATAAAATTATACGAATGCATTCCATAGCACTTGAAATACCAATCA AAAAATGTTCTAGCAATATGCTAATAAATAAAGGGATCAAACCCTTTCAGGAATTTATTACACCAGAACATTTTAAGAAT ATAATTTATCTTGAACAAAAACTACTATACCGCACACTTAAGTATTATCATTGCATTAATTCTGAACAAAGAAAAGCAAT TATCAAACAACTACTATTGGCTCAAGGGCAGCTTGAAATAAAAGAAGATCTTAATTCTATAGAGAAAAAAGATTTTGACT TAGTTAATACAGCACTTGATTTTTATATTTGTGATATTATGGGTCGTTTTAAAGACGTGCTCGAACCTGATGTTTAA
Upstream 100 bases:
>100_bases GCTAATGGCCTAATTATTTTAGGCTATCTCAATTTATAACTCAAGATTAATAATAAATATATAATTGTTAAATATTATGC GGGGTTTTAAAGAGTAAAGT
Downstream 100 bases:
>100_bases ATTAAGAGCAATAAGATAAGTTCAGAACTTTTTCAGTTAATATACTAAATTATCAAAGTCTTTTTTTATAACTCAGGATC AATTGTATATCTCATTTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MHIQVLSAAKHLFYRMFNLRKQNKATQIFSVSQEKWFAFFNDLHSHTEQKNLIQLLITHLIKIKSNLTIDQQKKCLTGYL TDPNYNLTRKEQKYILKLTNENDFIWNKKGQNFLDFCMYKIIRMHSIALEIPIKKCSSNMLINKGIKPFQEFITPEHFKN IIYLEQKLLYRTLKYYHCINSEQRKAIIKQLLLAQGQLEIKEDLNSIEKKDFDLVNTALDFYICDIMGRFKDVLEPDV
Sequences:
>Translated_238_residues MHIQVLSAAKHLFYRMFNLRKQNKATQIFSVSQEKWFAFFNDLHSHTEQKNLIQLLITHLIKIKSNLTIDQQKKCLTGYL TDPNYNLTRKEQKYILKLTNENDFIWNKKGQNFLDFCMYKIIRMHSIALEIPIKKCSSNMLINKGIKPFQEFITPEHFKN IIYLEQKLLYRTLKYYHCINSEQRKAIIKQLLLAQGQLEIKEDLNSIEKKDFDLVNTALDFYICDIMGRFKDVLEPDV >Mature_238_residues MHIQVLSAAKHLFYRMFNLRKQNKATQIFSVSQEKWFAFFNDLHSHTEQKNLIQLLITHLIKIKSNLTIDQQKKCLTGYL TDPNYNLTRKEQKYILKLTNENDFIWNKKGQNFLDFCMYKIIRMHSIALEIPIKKCSSNMLINKGIKPFQEFITPEHFKN IIYLEQKLLYRTLKYYHCINSEQRKAIIKQLLLAQGQLEIKEDLNSIEKKDFDLVNTALDFYICDIMGRFKDVLEPDV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28404; Mature: 28404
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHIQVLSAAKHLFYRMFNLRKQNKATQIFSVSQEKWFAFFNDLHSHTEQKNLIQLLITHL CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IKIKSNLTIDQQKKCLTGYLTDPNYNLTRKEQKYILKLTNENDFIWNKKGQNFLDFCMYK HHHHCCCCHHHHHHHHHCEECCCCCCCCHHCCEEEEEECCCCCEEECCCCCHHHHHHHHH IIRMHSIALEIPIKKCSSNMLINKGIKPFQEFITPEHFKNIIYLEQKLLYRTLKYYHCIN HHHHHHHHHCCCHHHCCCCCHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC SEQRKAIIKQLLLAQGQLEIKEDLNSIEKKDFDLVNTALDFYICDIMGRFKDVLEPDV CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MHIQVLSAAKHLFYRMFNLRKQNKATQIFSVSQEKWFAFFNDLHSHTEQKNLIQLLITHL CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IKIKSNLTIDQQKKCLTGYLTDPNYNLTRKEQKYILKLTNENDFIWNKKGQNFLDFCMYK HHHHCCCCHHHHHHHHHCEECCCCCCCCHHCCEEEEEECCCCCEEECCCCCHHHHHHHHH IIRMHSIALEIPIKKCSSNMLINKGIKPFQEFITPEHFKNIIYLEQKLLYRTLKYYHCIN HHHHHHHHHCCCHHHCCCCCHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC SEQRKAIIKQLLLAQGQLEIKEDLNSIEKKDFDLVNTALDFYICDIMGRFKDVLEPDV CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA