Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189184325

Identifier: 189184325

GI number: 189184325

Start: 1453976

End: 1454416

Strand: Reverse

Name: 189184325

Synonym: OTT_1418

Alternate gene names: NA

Gene position: 1454416-1453976 (Counterclockwise)

Preceding gene: 189184326

Following gene: 189184324

Centisome position: 72.4

GC content: 28.12

Gene sequence:

>441_bases
ATGGCAAGAAGATACAGTTATGATTTAAGAATGAAGATATTCAAAGCACTAGATGAGGGAGTATCAATTGTTAAAGCATG
TAAAATATTCAATATAAGTCGTAATACGATATATAGATGGAAACATCTTAAATGGGAAACAGGAGATATTAAAGCAAAAC
CTTATGGCCCAGCCAAAGGTTATAATGGGAAAATAGATCTCAAAGAATTTGAGGAGTTAATTATCAATCATCATGATAAA
ACAGCTAAAGAATTAAGTATTATACTAGGTAATAGATTACAAAGAACTAGAATAAATTATTATAGAAAACTACTAGGATA
CACTTATAAAAAAACTCATTTTCATTCCAAAAGGGATATTGTGTTAAGGAATGAATTTATCGAGAAGGTAAAGCAAATTT
CTAAAGAAAATCTAGTATTTATTGATGAGTCAGGAATATAG

Upstream 100 bases:

>100_bases
ATCGTAAAGGAGAGATATAGCACGAACGTAGGAAATAGGTACATAATATGATAATATGAAAAGAGTATAAAAAAAAAAAA
AAAAAAAAAATAGATAAATA

Downstream 100 bases:

>100_bases
GATAATGCTTGTAGAGAATATGGATGGAGTATAAAAGGTACTAGATGTTATGGCAATAAAGCTTATCAACATAAATCCAG
GGTTAGTATGATAGCAGGGC

Product: transposase

Products: NA

Alternate protein names: Transposase And Inactivated Derivative

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MARRYSYDLRMKIFKALDEGVSIVKACKIFNISRNTIYRWKHLKWETGDIKAKPYGPAKGYNGKIDLKEFEELIINHHDK
TAKELSIILGNRLQRTRINYYRKLLGYTYKKTHFHSKRDIVLRNEFIEKVKQISKENLVFIDESGI

Sequences:

>Translated_146_residues
MARRYSYDLRMKIFKALDEGVSIVKACKIFNISRNTIYRWKHLKWETGDIKAKPYGPAKGYNGKIDLKEFEELIINHHDK
TAKELSIILGNRLQRTRINYYRKLLGYTYKKTHFHSKRDIVLRNEFIEKVKQISKENLVFIDESGI
>Mature_145_residues
ARRYSYDLRMKIFKALDEGVSIVKACKIFNISRNTIYRWKHLKWETGDIKAKPYGPAKGYNGKIDLKEFEELIINHHDKT
AKELSIILGNRLQRTRINYYRKLLGYTYKKTHFHSKRDIVLRNEFIEKVKQISKENLVFIDESGI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17412; Mature: 17280

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRYSYDLRMKIFKALDEGVSIVKACKIFNISRNTIYRWKHLKWETGDIKAKPYGPAKG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECEECCCCEECCCCCCCCC
YNGKIDLKEFEELIINHHDKTAKELSIILGNRLQRTRINYYRKLLGYTYKKTHFHSKRDI
CCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCC
VLRNEFIEKVKQISKENLVFIDESGI
HHHHHHHHHHHHHCCCCEEEEECCCC
>Mature Secondary Structure 
ARRYSYDLRMKIFKALDEGVSIVKACKIFNISRNTIYRWKHLKWETGDIKAKPYGPAKG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECEECCCCEECCCCCCCCC
YNGKIDLKEFEELIINHHDKTAKELSIILGNRLQRTRINYYRKLLGYTYKKTHFHSKRDI
CCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCC
VLRNEFIEKVKQISKENLVFIDESGI
HHHHHHHHHHHHHCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA