Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189184327

Identifier: 189184327

GI number: 189184327

Start: 1455104

End: 1455418

Strand: Reverse

Name: 189184327

Synonym: OTT_1420

Alternate gene names: NA

Gene position: 1455418-1455104 (Counterclockwise)

Preceding gene: 189184329

Following gene: 189184326

Centisome position: 72.45

GC content: 31.43

Gene sequence:

>315_bases
ATGGCTGCAATTGCCAAAGAAGAAAAGTGGTTGTTAATTCCAGCAATAGATCCTGATAGTAAAATGACGGTTTCATCAAA
AAATTACCATGAAACCTATTTAAAGGAATGGGCAATTTTTGTGATGAAAGTCTTATTTACTACTTCTCCAAATGAGGCAG
AAAGGCAAATAGCAGACATGAAAGTGGTATTCAGTAATACTGAATCTTTAAAAATTTTTTTCAGAATCATTTGCAATTTG
TTAAAGGCTCAAATGTGTCTTCACTCTTTTTTTCTAAAGAAGGTTGAAGTGATAAATGAATGGAGTATTAATTAG

Upstream 100 bases:

>100_bases
TCATTTCTTTAAGCAAAATGCTATACAAGAGCTGGTTAAATATAATAAATGCTTACTTTCAGTAACTATATTGCTAGCTG
CAGCTAATATAATTGCGATA

Downstream 100 bases:

>100_bases
TGGCACGCTTCGGTATTGGTTTAGCGATTAAACATATAGCTGTCGATAAGACTTACTTTCTGACTTACAAGCGAACTCCT
AATTACCTTTTATTGTTGAC

Product: putative conjugative transfer protein TraE

Products: NA

Alternate protein names: Conjugative Transfer Protein

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MAAIAKEEKWLLIPAIDPDSKMTVSSKNYHETYLKEWAIFVMKVLFTTSPNEAERQIADMKVVFSNTESLKIFFRIICNL
LKAQMCLHSFFLKKVEVINEWSIN

Sequences:

>Translated_104_residues
MAAIAKEEKWLLIPAIDPDSKMTVSSKNYHETYLKEWAIFVMKVLFTTSPNEAERQIADMKVVFSNTESLKIFFRIICNL
LKAQMCLHSFFLKKVEVINEWSIN
>Mature_103_residues
AAIAKEEKWLLIPAIDPDSKMTVSSKNYHETYLKEWAIFVMKVLFTTSPNEAERQIADMKVVFSNTESLKIFFRIICNLL
KAQMCLHSFFLKKVEVINEWSIN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12146; Mature: 12015

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAIAKEEKWLLIPAIDPDSKMTVSSKNYHETYLKEWAIFVMKVLFTTSPNEAERQIADM
CCCCCCCCCEEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
KVVFSNTESLKIFFRIICNLLKAQMCLHSFFLKKVEVINEWSIN
HHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AAIAKEEKWLLIPAIDPDSKMTVSSKNYHETYLKEWAIFVMKVLFTTSPNEAERQIADM
CCCCCCCCEEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
KVVFSNTESLKIFFRIICNLLKAQMCLHSFFLKKVEVINEWSIN
HHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA