| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183639
Identifier: 189183639
GI number: 189183639
Start: 755840
End: 756700
Strand: Direct
Name: 189183639
Synonym: OTT_0732
Alternate gene names: NA
Gene position: 755840-756700 (Clockwise)
Preceding gene: 189183638
Following gene: 189183642
Centisome position: 37.62
GC content: 31.13
Gene sequence:
>861_bases ATGAATTATTCTGTATTTGTGGCACGAAAAAAAAATCTAGAGTTAGTGTTAATAAACTTACTTATAAGTTTATTATTATC GAGTTATATCAATACAAGCTATAATGCTCGTGTAAATAGGGCAAACAAAGTTGTTCAAAATACAGAAATGAAACATGATA TAATAAAAACTAATAAGTTCTTACTTACAGTTTTTCATAAAATCACAAACCCAAATACAAACTTTGTGTTTTATATTGAA GGTGATGGCTTGATATATTATAATGACAGTATATCTAATAATCCTACACCATTACTTCCGTTGGTAGTAGAGCTTGCTAC TATTGATCCACGACCAAATGTAGTTTATATAGCCAGGCCTTGCCAATATACTCCTCTATCACTGCAGAAAAATTGCGTAA AAGAATATTGGACTAACAAAAGGTTTGCAAAAGAAATTATCGATGCTATCAATGAGGCTATTGTAAAAATTAGTAATAAT CAACTATGTGATATTATTGGTTACTCTGGTGGTGGAGGACTAGCAGTATTAGTTGCAGCAATTAACCCTAATGTCAGGAC AATTACAACTATAGCTGGTAATCTTGATCATATTGCATTTAATAATTTTCATAATAATCCTCACATGACAGATTCTCTTA ATCCTATTGACTATGCTGAACAAGTTAAGTACATACCACAGCTTCATTTATCTGGCATGAAAGACAAGATAGTACCCCCA TTTATTGCTGATAAGTTTGTACAACACGTAAACTTTGCAAAAGTAATTAAGTTTGAATCCATTAGTCATGATAAGGGATG GAAATCAATTTGGCGAAAATTTTGCACACGTCATGAAGCATATATAGCTAAACCATTATAA
Upstream 100 bases:
>100_bases TGATGATGATCTACCATTTTAGCTTATAGAATATTTCACATGAACTTTTGAGTATACTAGTTATTAGTAATAAACGTAAT AAGCATTAATAAAAATAATT
Downstream 100 bases:
>100_bases AACAGTTATATTATATACTTTTTGAAAAGCGAATCTAAGTTACAGTAACACTTCATTCTGCTTGATTTAGCTTGAAACTA TTTTTTCTCAATAAGATTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MNYSVFVARKKNLELVLINLLISLLLSSYINTSYNARVNRANKVVQNTEMKHDIIKTNKFLLTVFHKITNPNTNFVFYIE GDGLIYYNDSISNNPTPLLPLVVELATIDPRPNVVYIARPCQYTPLSLQKNCVKEYWTNKRFAKEIIDAINEAIVKISNN QLCDIIGYSGGGGLAVLVAAINPNVRTITTIAGNLDHIAFNNFHNNPHMTDSLNPIDYAEQVKYIPQLHLSGMKDKIVPP FIADKFVQHVNFAKVIKFESISHDKGWKSIWRKFCTRHEAYIAKPL
Sequences:
>Translated_286_residues MNYSVFVARKKNLELVLINLLISLLLSSYINTSYNARVNRANKVVQNTEMKHDIIKTNKFLLTVFHKITNPNTNFVFYIE GDGLIYYNDSISNNPTPLLPLVVELATIDPRPNVVYIARPCQYTPLSLQKNCVKEYWTNKRFAKEIIDAINEAIVKISNN QLCDIIGYSGGGGLAVLVAAINPNVRTITTIAGNLDHIAFNNFHNNPHMTDSLNPIDYAEQVKYIPQLHLSGMKDKIVPP FIADKFVQHVNFAKVIKFESISHDKGWKSIWRKFCTRHEAYIAKPL >Mature_286_residues MNYSVFVARKKNLELVLINLLISLLLSSYINTSYNARVNRANKVVQNTEMKHDIIKTNKFLLTVFHKITNPNTNFVFYIE GDGLIYYNDSISNNPTPLLPLVVELATIDPRPNVVYIARPCQYTPLSLQKNCVKEYWTNKRFAKEIIDAINEAIVKISNN QLCDIIGYSGGGGLAVLVAAINPNVRTITTIAGNLDHIAFNNFHNNPHMTDSLNPIDYAEQVKYIPQLHLSGMKDKIVPP FIADKFVQHVNFAKVIKFESISHDKGWKSIWRKFCTRHEAYIAKPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32535; Mature: 32535
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYSVFVARKKNLELVLINLLISLLLSSYINTSYNARVNRANKVVQNTEMKHDIIKTNKF CCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LLTVFHKITNPNTNFVFYIEGDGLIYYNDSISNNPTPLLPLVVELATIDPRPNVVYIARP HHHHHHHHCCCCCCEEEEEECCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECC CQYTPLSLQKNCVKEYWTNKRFAKEIIDAINEAIVKISNNQLCDIIGYSGGGGLAVLVAA CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEECCCCEEEEEEECCCCCEEEEEEE INPNVRTITTIAGNLDHIAFNNFHNNPHMTDSLNPIDYAEQVKYIPQLHLSGMKDKIVPP CCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC FIADKFVQHVNFAKVIKFESISHDKGWKSIWRKFCTRHEAYIAKPL HHHHHHHHHCCHHHHEEECCCCCCCHHHHHHHHHHCCCCCEEECCC >Mature Secondary Structure MNYSVFVARKKNLELVLINLLISLLLSSYINTSYNARVNRANKVVQNTEMKHDIIKTNKF CCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LLTVFHKITNPNTNFVFYIEGDGLIYYNDSISNNPTPLLPLVVELATIDPRPNVVYIARP HHHHHHHHCCCCCCEEEEEECCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECC CQYTPLSLQKNCVKEYWTNKRFAKEIIDAINEAIVKISNNQLCDIIGYSGGGGLAVLVAA CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEECCCCEEEEEEECCCCCEEEEEEE INPNVRTITTIAGNLDHIAFNNFHNNPHMTDSLNPIDYAEQVKYIPQLHLSGMKDKIVPP CCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC FIADKFVQHVNFAKVIKFESISHDKGWKSIWRKFCTRHEAYIAKPL HHHHHHHHHCCHHHHEEECCCCCCCHHHHHHHHHHCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA