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The map label for this gene is ssb [H]

Identifier: 189183638

GI number: 189183638

Start: 755294

End: 755761

Strand: Direct

Name: ssb [H]

Synonym: OTT_0731

Alternate gene names: 189183638

Gene position: 755294-755761 (Clockwise)

Preceding gene: 189183635

Following gene: 189183639

Centisome position: 37.6

GC content: 31.84

Gene sequence:

>468_bases
ATGGCTGGCAGCTTAAACAGAGTAACATTAATAGGAAATCTTGGTCATGATCCAGAAATTAGAAAAACAAATGACGGTAA
AGAGATAGCAGCATTTAGCTTAGCAACAACAGAAACATGGCGTGATAAGCATAGTAATGAAAAGAAGGAGAAAACAGAGT
GGCATCGTATAGTAGTATTTAATGATGGCATAGTCAATATTATCAAAAGTTATGTTAAAAAAGGTAGTAAAGTGCTTATT
GAAGGTAGTTTACAAACTAGAAAATGGCAAGATTCATCTGGACAAGAAAAATATACCACTGAAATAGTATTACAAAATTA
TAATGCGAGTTTAATTTTGCTTGATTCAAAATCTTCTAGTGATGCATCATCTCTTCATACTAAAACACCAAATGATACGC
TGTCTGTTCAAAACAAAACACATTCAAATTTAAGTCAATCACTAGATGATGATGATCTACCATTTTAG

Upstream 100 bases:

>100_bases
AACATAGTTTCAAAATAAACATAACAAAAAATATTAGCATAATATAAAATTTTAACTTATATTAAACGTTGTTTTCATAA
ATTTATTGGAGAAAAGTGTA

Downstream 100 bases:

>100_bases
CTTATAGAATATTTCACATGAACTTTTGAGTATACTAGTTATTAGTAATAAACGTAATAAGCATTAATAAAAATAATTAT
GAATTATTCTGTATTTGTGG

Product: single-strand binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 155; Mature: 154

Protein sequence:

>155_residues
MAGSLNRVTLIGNLGHDPEIRKTNDGKEIAAFSLATTETWRDKHSNEKKEKTEWHRIVVFNDGIVNIIKSYVKKGSKVLI
EGSLQTRKWQDSSGQEKYTTEIVLQNYNASLILLDSKSSSDASSLHTKTPNDTLSVQNKTHSNLSQSLDDDDLPF

Sequences:

>Translated_155_residues
MAGSLNRVTLIGNLGHDPEIRKTNDGKEIAAFSLATTETWRDKHSNEKKEKTEWHRIVVFNDGIVNIIKSYVKKGSKVLI
EGSLQTRKWQDSSGQEKYTTEIVLQNYNASLILLDSKSSSDASSLHTKTPNDTLSVQNKTHSNLSQSLDDDDLPF
>Mature_154_residues
AGSLNRVTLIGNLGHDPEIRKTNDGKEIAAFSLATTETWRDKHSNEKKEKTEWHRIVVFNDGIVNIIKSYVKKGSKVLIE
GSLQTRKWQDSSGQEKYTTEIVLQNYNASLILLDSKSSSDASSLHTKTPNDTLSVQNKTHSNLSQSLDDDDLPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Homo sapiens, GI4507231, Length=108, Percent_Identity=37.962962962963, Blast_Score=82, Evalue=2e-16,
Organism=Escherichia coli, GI1790494, Length=121, Percent_Identity=46.2809917355372, Blast_Score=130, Evalue=4e-32,
Organism=Drosophila melanogaster, GI85725234, Length=106, Percent_Identity=31.1320754716981, Blast_Score=66, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24647376, Length=106, Percent_Identity=31.1320754716981, Blast_Score=66, Evalue=1e-11,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 17360; Mature: 17229

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGSLNRVTLIGNLGHDPEIRKTNDGKEIAAFSLATTETWRDKHSNEKKEKTEWHRIVVF
CCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEECCHHHHHHCCCCCCCCCCEEEEEEE
NDGIVNIIKSYVKKGSKVLIEGSLQTRKWQDSSGQEKYTTEIVLQNYNASLILLDSKSSS
CCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCC
DASSLHTKTPNDTLSVQNKTHSNLSQSLDDDDLPF
CCCCCCCCCCCCEEEECCCCHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AGSLNRVTLIGNLGHDPEIRKTNDGKEIAAFSLATTETWRDKHSNEKKEKTEWHRIVVF
CCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEECCHHHHHHCCCCCCCCCCEEEEEEE
NDGIVNIIKSYVKKGSKVLIEGSLQTRKWQDSSGQEKYTTEIVLQNYNASLILLDSKSSS
CCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCC
DASSLHTKTPNDTLSVQNKTHSNLSQSLDDDDLPF
CCCCCCCCCCCCEEEECCCCHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA