Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183528

Identifier: 189183528

GI number: 189183528

Start: 639482

End: 639856

Strand: Direct

Name: 189183528

Synonym: OTT_0621

Alternate gene names: NA

Gene position: 639482-639856 (Clockwise)

Preceding gene: 189183527

Following gene: 189183529

Centisome position: 31.83

GC content: 28.27

Gene sequence:

>375_bases
GTGGCAGACAAGCAAACGCACAAAGGACTATGTACAGATTTTTCTAACGGTAAAAAACATGACTTTAGATTATTTAAGGA
ATCCAAAATTCTTATTCATCCTAAAGTTAAAGCAATTACTGATACAGGATATCAAGGTATACAAAAAATTCACAATAATT
CTGAATTACCAAAGAAAAAAAGCAAGAAAAATCCTTTAACTAAAAATGATAAAAAGAATAATCGTAGATTAGCAGGGGAA
ATAGTTGTGAATGAAAACGTTATTGCTATGCTAAAACAGTTCAAAATTATTGCTGATAAATATCGAAATAGACGTAAAAG
ATTCGGTCTTAGATTTAATTTGATCTATGGCATTTATAATTTTGAACTACGTTAA

Upstream 100 bases:

>100_bases
GTCTTGATTGATGCTACTGAGAGTCCTATAGAAAGACTCAAAAAAACAAAAATTCTATTATTCAAAAAAGAAGAAAAGGT
ATACACTAAAAACTCAAATA

Downstream 100 bases:

>100_bases
CCAGTTTCGAAAGAGGTCTAATAAAGATGTAAAATATTAGAAAGTAAAATGAAAATATTATTCAAACTTTTGAAGGATAA
ATAAAAAAATTTGTTAAAAT

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MADKQTHKGLCTDFSNGKKHDFRLFKESKILIHPKVKAITDTGYQGIQKIHNNSELPKKKSKKNPLTKNDKKNNRRLAGE
IVVNENVIAMLKQFKIIADKYRNRRKRFGLRFNLIYGIYNFELR

Sequences:

>Translated_124_residues
MADKQTHKGLCTDFSNGKKHDFRLFKESKILIHPKVKAITDTGYQGIQKIHNNSELPKKKSKKNPLTKNDKKNNRRLAGE
IVVNENVIAMLKQFKIIADKYRNRRKRFGLRFNLIYGIYNFELR
>Mature_123_residues
ADKQTHKGLCTDFSNGKKHDFRLFKESKILIHPKVKAITDTGYQGIQKIHNNSELPKKKSKKNPLTKNDKKNNRRLAGEI
VVNENVIAMLKQFKIIADKYRNRRKRFGLRFNLIYGIYNFELR

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3293

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 11 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002559 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 14603; Mature: 14472

Theoretical pI: Translated: 11.02; Mature: 11.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADKQTHKGLCTDFSNGKKHDFRLFKESKILIHPKVKAITDTGYQGIQKIHNNSELPKKK
CCCCCCCCCCCCCCCCCCCCCEEEEECCEEEECCCCEEECCCCHHHHHHHHCCCCCCCCC
SKKNPLTKNDKKNNRRLAGEIVVNENVIAMLKQFKIIADKYRNRRKRFGLRFNLIYGIYN
CCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEE
FELR
EEEC
>Mature Secondary Structure 
ADKQTHKGLCTDFSNGKKHDFRLFKESKILIHPKVKAITDTGYQGIQKIHNNSELPKKK
CCCCCCCCCCCCCCCCCCCCEEEEECCEEEECCCCEEECCCCHHHHHHHHCCCCCCCCC
SKKNPLTKNDKKNNRRLAGEIVVNENVIAMLKQFKIIADKYRNRRKRFGLRFNLIYGIYN
CCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEE
FELR
EEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1662761 [H]