| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183527
Identifier: 189183527
GI number: 189183527
Start: 639034
End: 639528
Strand: Direct
Name: 189183527
Synonym: OTT_0620
Alternate gene names: NA
Gene position: 639034-639528 (Clockwise)
Preceding gene: 189183526
Following gene: 189183528
Centisome position: 31.81
GC content: 32.32
Gene sequence:
>495_bases ATGAAATTTGATCAAATTAAAGAGTTAAAGGATGAAAAATTTCGTCGATTAACAAGAGTAAGGAAGGGAACATTTTCAAA GATGGTGAATATTTTGAGGAAAGCTGATGGTCTTAATAAATCAAAAAGTGGGCGTAAAAATAAGCTCAATTTGAAGGAAC AGTTGCTGTTGGTCTTAGAATACCTTAGAGAATACTGTACTTATTTCCATATAGGTCAGAACTATGGGATTAGTGAAAGT TCAGCATATAAAGCTGTTAAATGGGTAGAAGACACCTTAGTTAAACACCCAAACTTTGCTCTTCCAAGTCGTAAAACTCT AATGAAGAGTGATATGAATTATGAAGTAGTCTTGATTGATGCTACTGAGAGTCCTATAGAAAGACTCAAAAAAACAAAAA TTCTATTATTCAAAAAAGAAGAAAAGGTATACACTAAAAACTCAAATAGTGGCAGACAAGCAAACGCACAAAGGACTATG TACAGATTTTTCTAA
Upstream 100 bases:
>100_bases ACAATTAGTTAATTATTAACCTAAGTTCGATATAATAGATTTCTTTCGAAACTAGAGAATGATGTAGAATAGTGTTATAA AGATCTGATTTGAGGTAATA
Downstream 100 bases:
>100_bases CGGTAAAAAACATGACTTTAGATTATTTAAGGAATCCAAAATTCTTATTCATCCTAAAGTTAAAGCAATTACTGATACAG GATATCAAGGTATACAAAAA
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MKFDQIKELKDEKFRRLTRVRKGTFSKMVNILRKADGLNKSKSGRKNKLNLKEQLLLVLEYLREYCTYFHIGQNYGISES SAYKAVKWVEDTLVKHPNFALPSRKTLMKSDMNYEVVLIDATESPIERLKKTKILLFKKEEKVYTKNSNSGRQANAQRTM YRFF
Sequences:
>Translated_164_residues MKFDQIKELKDEKFRRLTRVRKGTFSKMVNILRKADGLNKSKSGRKNKLNLKEQLLLVLEYLREYCTYFHIGQNYGISES SAYKAVKWVEDTLVKHPNFALPSRKTLMKSDMNYEVVLIDATESPIERLKKTKILLFKKEEKVYTKNSNSGRQANAQRTM YRFF >Mature_164_residues MKFDQIKELKDEKFRRLTRVRKGTFSKMVNILRKADGLNKSKSGRKNKLNLKEQLLLVLEYLREYCTYFHIGQNYGISES SAYKAVKWVEDTLVKHPNFALPSRKTLMKSDMNYEVVLIDATESPIERLKKTKILLFKKEEKVYTKNSNSGRQANAQRTM YRFF
Specific function: Involved in the transposition of the insertion sequence [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 11 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002559 [H]
Pfam domain/function: PF01609 Transposase_11 [H]
EC number: NA
Molecular weight: Translated: 19413; Mature: 19413
Theoretical pI: Translated: 10.63; Mature: 10.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFDQIKELKDEKFRRLTRVRKGTFSKMVNILRKADGLNKSKSGRKNKLNLKEQLLLVLE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH YLREYCTYFHIGQNYGISESSAYKAVKWVEDTLVKHPNFALPSRKTLMKSDMNYEVVLID HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCEEEEEEE ATESPIERLKKTKILLFKKEEKVYTKNSNSGRQANAQRTMYRFF CCHHHHHHHHHHHHEEEECCCHHEECCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MKFDQIKELKDEKFRRLTRVRKGTFSKMVNILRKADGLNKSKSGRKNKLNLKEQLLLVLE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH YLREYCTYFHIGQNYGISESSAYKAVKWVEDTLVKHPNFALPSRKTLMKSDMNYEVVLID HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCEEEEEEE ATESPIERLKKTKILLFKKEEKVYTKNSNSGRQANAQRTMYRFF CCHHHHHHHHHHHHEEEECCCHHEECCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1662761 [H]