Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183452

Identifier: 189183452

GI number: 189183452

Start: 563252

End: 563797

Strand: Direct

Name: 189183452

Synonym: OTT_0545

Alternate gene names: NA

Gene position: 563252-563797 (Clockwise)

Preceding gene: 189183451

Following gene: 189183453

Centisome position: 28.04

GC content: 40.48

Gene sequence:

>546_bases
ATGTGTAAGGTGATCATGGTTCTTCTCGTAACAACTTGTTTTTTAGGACTAAATTGTACTCAGGCAAATGCGTTGCCCAA
TACAACTCTTCAAACTTTAAAGGAGGATCGTAAAGTGACAGAAAACAATAAAACAATTCTTCGTGAGTTTATGGAAGAGT
TGTGGAACAAAGGAAATCTGGATGCGGTAGATAAATTTATCGCATTTCCATATGTAATTCATAGCGATCCAGGATACCAG
ATGGAATGGCAGAGCCTTAACCTTCCCACATTTAAAAAGCGTGTTTTGTACTCTCGCCAAACTTTCCCCGACTTGCATTT
TGCTGTTAAAGAAATCATAGGCGAAGAAGATAAAGTGGTTATCAGTTGGGACTTAGAAGGAACACATCGTGGAGATATTC
CTGGTCTTCCAGCTACAGGAAAACGGGTAAAGGTACCTGGCATCACCATCTATTACTTTTCTGGTGGCAAGATAACAGGT
CATTGGCAAGTCATCGATCGTTTAGGTTTCATGCAACAAGTGATGCCCCATGCACCCCAAAAATGA

Upstream 100 bases:

>100_bases
TTTACCTTGCATATTTTGTTACTACAATTTTGATCATGAAGTAGCTGAAACAGAATTGATCACGGAAGTGTGGTCGCTTT
TTAAATAGGGGGGTTTTATC

Downstream 100 bases:

>100_bases
AAAAGGTGAACCTCGATGCTGCAAGGCTTGTGAGATACTTAGTTAAGATTATTAATGTTACTGATTTGAGGTATCAAAAT
GAGTGCTTATGAATATTCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MCKVIMVLLVTTCFLGLNCTQANALPNTTLQTLKEDRKVTENNKTILREFMEELWNKGNLDAVDKFIAFPYVIHSDPGYQ
MEWQSLNLPTFKKRVLYSRQTFPDLHFAVKEIIGEEDKVVISWDLEGTHRGDIPGLPATGKRVKVPGITIYYFSGGKITG
HWQVIDRLGFMQQVMPHAPQK

Sequences:

>Translated_181_residues
MCKVIMVLLVTTCFLGLNCTQANALPNTTLQTLKEDRKVTENNKTILREFMEELWNKGNLDAVDKFIAFPYVIHSDPGYQ
MEWQSLNLPTFKKRVLYSRQTFPDLHFAVKEIIGEEDKVVISWDLEGTHRGDIPGLPATGKRVKVPGITIYYFSGGKITG
HWQVIDRLGFMQQVMPHAPQK
>Mature_181_residues
MCKVIMVLLVTTCFLGLNCTQANALPNTTLQTLKEDRKVTENNKTILREFMEELWNKGNLDAVDKFIAFPYVIHSDPGYQ
MEWQSLNLPTFKKRVLYSRQTFPDLHFAVKEIIGEEDKVVISWDLEGTHRGDIPGLPATGKRVKVPGITIYYFSGGKITG
HWQVIDRLGFMQQVMPHAPQK

Specific function: Unknown

COG id: COG5485

COG function: function code R; Predicted ester cyclase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20697; Mature: 20697

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCKVIMVLLVTTCFLGLNCTQANALPNTTLQTLKEDRKVTENNKTILREFMEELWNKGNL
CHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCH
DAVDKFIAFPYVIHSDPGYQMEWQSLNLPTFKKRVLYSRQTFPDLHFAVKEIIGEEDKVV
HHHHHHHHCCEEEECCCCCEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEE
ISWDLEGTHRGDIPGLPATGKRVKVPGITIYYFSGGKITGHWQVIDRLGFMQQVMPHAPQ
EEEECCCCCCCCCCCCCCCCCEEECCCEEEEEEECCEEEEHHHHHHHHHHHHHHHCCCCC
K
C
>Mature Secondary Structure
MCKVIMVLLVTTCFLGLNCTQANALPNTTLQTLKEDRKVTENNKTILREFMEELWNKGNL
CHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCH
DAVDKFIAFPYVIHSDPGYQMEWQSLNLPTFKKRVLYSRQTFPDLHFAVKEIIGEEDKVV
HHHHHHHHCCEEEECCCCCEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEE
ISWDLEGTHRGDIPGLPATGKRVKVPGITIYYFSGGKITGHWQVIDRLGFMQQVMPHAPQ
EEEECCCCCCCCCCCCCCCCCEEECCCEEEEEEECCEEEEHHHHHHHHHHHHHHHCCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA