| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183451
Identifier: 189183451
GI number: 189183451
Start: 562769
End: 563122
Strand: Direct
Name: 189183451
Synonym: OTT_0544
Alternate gene names: NA
Gene position: 562769-563122 (Clockwise)
Preceding gene: 189183450
Following gene: 189183452
Centisome position: 28.01
GC content: 40.96
Gene sequence:
>354_bases ATGATAAACGTGAGCATTAAAGAATTACCAGCTAGACGGCTGGCGGTAATAGAACACTACGGAGACCCTAAAAAAGTAGG TGAGACTGCCTCTAAGTTAATAGCCTTGGCTAAAGCGCAGCCGGTAAATTTAAAGCCTAAACCAGGTGAAGCTTTTGGTT TTTGGTATGGTGATCCAAAGGAAGTACCAGCAGAAGACTTTCGCTTTGACCTTGCGATTACGGTTCTGCAAACATTAAAG CTTGATGGTGAAGTTATAGAAAAATATCTTCCTGCAGGTAGATATGCTGTTATTTCCAACAAAGGGTCACGTGAAGCCAT TAGCGAAAAAATTTACTGGCTTTATTGCGATTGA
Upstream 100 bases:
>100_bases TAAACAAATTTGTGGACAAAGTCCCAGCGAATTTAGGCTTAAATCGAGTTGGCATACATGTGAGGTGCCGCCTTATTCAT TGCATAAATGAGACACAAAA
Downstream 100 bases:
>100_bases CTGCCCGAATCTAAAGAAGAACTTGGTGATTTACCTTGCATATTTTGTTACTACAATTTTGATCATGAAGTAGCTGAAAC AGAATTGATCACGGAAGTGT
Product: DNA gyrase inhibitor
Products: NA
Alternate protein names: DNA Gyrase Inhibitor; Transcriptional Regulator AraC Family; AraC Family Helix-Turn-Helix Transcriptional Activator; AraC Family Transcription Regulator
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MINVSIKELPARRLAVIEHYGDPKKVGETASKLIALAKAQPVNLKPKPGEAFGFWYGDPKEVPAEDFRFDLAITVLQTLK LDGEVIEKYLPAGRYAVISNKGSREAISEKIYWLYCD
Sequences:
>Translated_117_residues MINVSIKELPARRLAVIEHYGDPKKVGETASKLIALAKAQPVNLKPKPGEAFGFWYGDPKEVPAEDFRFDLAITVLQTLK LDGEVIEKYLPAGRYAVISNKGSREAISEKIYWLYCD >Mature_117_residues MINVSIKELPARRLAVIEHYGDPKKVGETASKLIALAKAQPVNLKPKPGEAFGFWYGDPKEVPAEDFRFDLAITVLQTLK LDGEVIEKYLPAGRYAVISNKGSREAISEKIYWLYCD
Specific function: Unknown
COG id: COG3449
COG function: function code L; DNA gyrase inhibitor
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13110; Mature: 13110
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINVSIKELPARRLAVIEHYGDPKKVGETASKLIALAKAQPVNLKPKPGEAFGFWYGDPK CCCCCHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCC EVPAEDFRFDLAITVLQTLKLDGEVIEKYLPAGRYAVISNKGSREAISEKIYWLYCD CCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEECCCCHHHHCCCEEEEEEC >Mature Secondary Structure MINVSIKELPARRLAVIEHYGDPKKVGETASKLIALAKAQPVNLKPKPGEAFGFWYGDPK CCCCCHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCC EVPAEDFRFDLAITVLQTLKLDGEVIEKYLPAGRYAVISNKGSREAISEKIYWLYCD CCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEECCCCHHHHCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA