| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183453
Identifier: 189183453
GI number: 189183453
Start: 563876
End: 564589
Strand: Direct
Name: 189183453
Synonym: OTT_0546
Alternate gene names: NA
Gene position: 563876-564589 (Clockwise)
Preceding gene: 189183452
Following gene: 189183459
Centisome position: 28.07
GC content: 38.38
Gene sequence:
>714_bases ATGAGTGCTTATGAATATTCTGATGGAAATACCTTATTTGAAGGGTATTTGGCCATTGATCAAAATCAAAAAACAAAGCA ACCTTGTGTTATAATAGCTTATGCTTGGGATGGACCCAACGATCATTTTAATGCTCTAGCTGACAATTTTGCACAAAAAG GCTTTGTTGGTTTTGCTATTGATGTTTATGGAAAAGGCAATCTCGGAAAAATAGATGGGGATAACATGCATTTGATGAAC CCACTCATGCAAAATCGCTCTTTGCTGCGCAAACGTTTACTTGCTGCGTTTAACGAAATACAAAAACATCCTTTAGTTAT TCCAGATAAAATTGCTATTATAGGATATTGTTTCGGTGGTCTTTGCGCCATAGATTTAGCTCGCGCCAATCCTTCTGGTT TGAAGGGCGATATCAGCGTCCATGGTGGACTCACGCCTCCTGATGTTTTGGGTTCAGGGTCAAAAATCGATACAAGCATC CTGGTGCTGCATGGTCTTGAAGACCCCGTGGTGCCACAAGAAACTGTCTTGAGTTTTGTCTATGAAATGACAAAATCTGA AGCTGACTTTCAAATTCACTGTTATGGTCATGCAAAACATGCTTTTACTTTTGTGAGCGCAGATATTCCAGATTTTGGAG TAAGATACAATGAAAAAGCCCATCATCGCTCAGAAATATCTATTAAGAATTTTCTTGAAGAGATTTTTTTATAG
Upstream 100 bases:
>100_bases GCCCCATGCACCCCAAAAATGAAAAAGGTGAACCTCGATGCTGCAAGGCTTGTGAGATACTTAGTTAAGATTATTAATGT TACTGATTTGAGGTATCAAA
Downstream 100 bases:
>100_bases GATTTATCATTCCATCAAAAATTCCCGTGATCTTCTCAAAATAGCTTGCATCACAACCATCCTCTAACGCCCATACCCAT GTAAGTACCACTTGCACAAA
Product: dienelactone hydrolase family protein
Products: NA
Alternate protein names: Dienelactone Hydrolase Family Protein; Carboxymethylenebutenolidase; Dienelactone Hydrolase Family; Hydrolase; Dienelactone Hydrolases; Dienelactone Hydrolase Protein; Dienelactone Hydrolase-Related; Transposase Remnant
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MSAYEYSDGNTLFEGYLAIDQNQKTKQPCVIIAYAWDGPNDHFNALADNFAQKGFVGFAIDVYGKGNLGKIDGDNMHLMN PLMQNRSLLRKRLLAAFNEIQKHPLVIPDKIAIIGYCFGGLCAIDLARANPSGLKGDISVHGGLTPPDVLGSGSKIDTSI LVLHGLEDPVVPQETVLSFVYEMTKSEADFQIHCYGHAKHAFTFVSADIPDFGVRYNEKAHHRSEISIKNFLEEIFL
Sequences:
>Translated_237_residues MSAYEYSDGNTLFEGYLAIDQNQKTKQPCVIIAYAWDGPNDHFNALADNFAQKGFVGFAIDVYGKGNLGKIDGDNMHLMN PLMQNRSLLRKRLLAAFNEIQKHPLVIPDKIAIIGYCFGGLCAIDLARANPSGLKGDISVHGGLTPPDVLGSGSKIDTSI LVLHGLEDPVVPQETVLSFVYEMTKSEADFQIHCYGHAKHAFTFVSADIPDFGVRYNEKAHHRSEISIKNFLEEIFL >Mature_236_residues SAYEYSDGNTLFEGYLAIDQNQKTKQPCVIIAYAWDGPNDHFNALADNFAQKGFVGFAIDVYGKGNLGKIDGDNMHLMNP LMQNRSLLRKRLLAAFNEIQKHPLVIPDKIAIIGYCFGGLCAIDLARANPSGLKGDISVHGGLTPPDVLGSGSKIDTSIL VLHGLEDPVVPQETVLSFVYEMTKSEADFQIHCYGHAKHAFTFVSADIPDFGVRYNEKAHHRSEISIKNFLEEIFL
Specific function: Unknown
COG id: COG0412
COG function: function code Q; Dienelactone hydrolase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI17536419, Length=240, Percent_Identity=39.1666666666667, Blast_Score=145, Evalue=2e-35, Organism=Caenorhabditis elegans, GI17532655, Length=237, Percent_Identity=40.9282700421941, Blast_Score=138, Evalue=2e-33, Organism=Caenorhabditis elegans, GI17532653, Length=237, Percent_Identity=36.7088607594937, Blast_Score=117, Evalue=7e-27, Organism=Caenorhabditis elegans, GI17536415, Length=237, Percent_Identity=35.0210970464135, Blast_Score=111, Evalue=3e-25, Organism=Caenorhabditis elegans, GI193204305, Length=214, Percent_Identity=35.5140186915888, Blast_Score=108, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17534829, Length=149, Percent_Identity=39.5973154362416, Blast_Score=91, Evalue=6e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26175; Mature: 26044
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAYEYSDGNTLFEGYLAIDQNQKTKQPCVIIAYAWDGPNDHFNALADNFAQKGFVGFAI CCCEEECCCCEEEEEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEE DVYGKGNLGKIDGDNMHLMNPLMQNRSLLRKRLLAAFNEIQKHPLVIPDKIAIIGYCFGG EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH LCAIDLARANPSGLKGDISVHGGLTPPDVLGSGSKIDTSILVLHGLEDPVVPQETVLSFV HHEEHEECCCCCCCCCEEEEECCCCCHHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHHH YEMTKSEADFQIHCYGHAKHAFTFVSADIPDFGVRYNEKAHHRSEISIKNFLEEIFL HHHHCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCCCHHHHHCCCHHHHHHHHCC >Mature Secondary Structure SAYEYSDGNTLFEGYLAIDQNQKTKQPCVIIAYAWDGPNDHFNALADNFAQKGFVGFAI CCEEECCCCEEEEEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEE DVYGKGNLGKIDGDNMHLMNPLMQNRSLLRKRLLAAFNEIQKHPLVIPDKIAIIGYCFGG EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH LCAIDLARANPSGLKGDISVHGGLTPPDVLGSGSKIDTSILVLHGLEDPVVPQETVLSFV HHEEHEECCCCCCCCCEEEEECCCCCHHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHHH YEMTKSEADFQIHCYGHAKHAFTFVSADIPDFGVRYNEKAHHRSEISIKNFLEEIFL HHHHCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCCCHHHHHCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA