Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183443

Identifier: 189183443

GI number: 189183443

Start: 557472

End: 557888

Strand: Direct

Name: 189183443

Synonym: OTT_0536

Alternate gene names: NA

Gene position: 557472-557888 (Clockwise)

Preceding gene: 189183442

Following gene: 189183444

Centisome position: 27.75

GC content: 36.93

Gene sequence:

>417_bases
ATGAAAACACTTAAACATACAACTGCAAAAGCCTCTTATTACAACACAAGGGCTGAGTGCTATGATGAATTTAATGAAAA
TAATTCGAGGGCCATCAATGCGCTTTTAGAGAAAATATTAAAAGAACATCATGTTGCTACCGTTCTTGATCTTACTTGCG
GTACTGGTTCTCAAGTCTTTTGGCTCATCGAGGCAGGCTTTGAAGTCGTAAGTAGCGACATTAGCCTGAACATGCTCAAA
ATTGCTAAACAAAAAGCGAAACTAAAAGCCGACACATTTTTTATCTATCCATACGAAAACAATCCTAGAGCTATAAGAGT
TTATAATAAAGCCAGCTTTACTAAAGTTGGGCAATATCAAGCAACGCAAGGAGCATTCATCGGACACAACAGCGATTTAA
TGGTAAAAAAACTATGA

Upstream 100 bases:

>100_bases
ATCTCCCACCCTAATTTATTTTCGCTAAATGTTAGCAATTTAAGCCTGGAAGATACAGCAGAAGCGATTATGAATCATAT
AAACTAGGTCAGAGGTGAAT

Downstream 100 bases:

>100_bases
CTATTACAAACATCAACTACATCACTTTAGCTGTTACTGACATCCATCGATCTTTCTCGTTTTACAAAGATGTTTTAGGA
TTTAAACCATTAGTTAAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MKTLKHTTAKASYYNTRAECYDEFNENNSRAINALLEKILKEHHVATVLDLTCGTGSQVFWLIEAGFEVVSSDISLNMLK
IAKQKAKLKADTFFIYPYENNPRAIRVYNKASFTKVGQYQATQGAFIGHNSDLMVKKL

Sequences:

>Translated_138_residues
MKTLKHTTAKASYYNTRAECYDEFNENNSRAINALLEKILKEHHVATVLDLTCGTGSQVFWLIEAGFEVVSSDISLNMLK
IAKQKAKLKADTFFIYPYENNPRAIRVYNKASFTKVGQYQATQGAFIGHNSDLMVKKL
>Mature_138_residues
MKTLKHTTAKASYYNTRAECYDEFNENNSRAINALLEKILKEHHVATVLDLTCGTGSQVFWLIEAGFEVVSSDISLNMLK
IAKQKAKLKADTFFIYPYENNPRAIRVYNKASFTKVGQYQATQGAFIGHNSDLMVKKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15630; Mature: 15630

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLKHTTAKASYYNTRAECYDEFNENNSRAINALLEKILKEHHVATVLDLTCGTGSQVF
CCCCCCCCCCCHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEE
WLIEAGFEVVSSDISLNMLKIAKQKAKLKADTFFIYPYENNPRAIRVYNKASFTKVGQYQ
EEEECCHHHHHCCCCHHHHHHHHHHHCEECCEEEEEEEECCCCEEEEECCCCCEECCCCC
ATQGAFIGHNSDLMVKKL
CCCCEEECCCCCEEEEEC
>Mature Secondary Structure
MKTLKHTTAKASYYNTRAECYDEFNENNSRAINALLEKILKEHHVATVLDLTCGTGSQVF
CCCCCCCCCCCHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEE
WLIEAGFEVVSSDISLNMLKIAKQKAKLKADTFFIYPYENNPRAIRVYNKASFTKVGQYQ
EEEECCHHHHHCCCCHHHHHHHHHHHCEECCEEEEEEEECCCCEEEEECCCCCEECCCCC
ATQGAFIGHNSDLMVKKL
CCCCEEECCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA