Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
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Accession | NC_010793 |
Length | 2,008,987 |
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The map label for this gene is 189183426
Identifier: 189183426
GI number: 189183426
Start: 544569
End: 544877
Strand: Direct
Name: 189183426
Synonym: OTT_0519
Alternate gene names: NA
Gene position: 544569-544877 (Clockwise)
Preceding gene: 189183425
Following gene: 189183439
Centisome position: 27.11
GC content: 28.48
Gene sequence:
>309_bases TTGAGTCATAAGTATGAAAGATACTTTTGTTTACCAAGCTATAGTAGAATAATACAACTGTGGCATAGAATGTTGCTACC ATTAGCCATATTAATGCATTATCTGAAAGGAGAAGAAACTGGTATATATTACATCGATGCTACAAAGTTAACAATTTGTC ATAATAAACGTACCTCCAGCAATAGAGTTTTTAACAAAATTTCTAAAATTTGTAAAAGTAGTTATGGCTTGTTCTTAGAC TTTAAGCTTCATCTTATAATCAATAATATGTCCAAGATTATTAAACTTTATGTCTTGATTTTTCGATGA
Upstream 100 bases:
>100_bases AAACAGAGATGGGAAGTTATCCTTAGCTGAGTTATTAACAATAGCGATATATTTTTATGTATCTCAATGCAAGGATTGTA AAAATTATTATCTATATTAC
Downstream 100 bases:
>100_bases TAGCAACTTTATACGCTCAAGTTTCGTTAACCATGTATTCCTGTCTATGCTGTGTACAGCCATTGTTTCCCTCTTACATT CTTACTTTTCTGCTAACCCT
Product: transposase
Products: NA
Alternate protein names: Transposase IS4 Family Protein; Transposase And Inactivated Derivative; Membrane-Associated Metal-Dependent Hydrolase; Transposase IS4 Family; Transposase IS; ISPg3 Transposase; IS4 Family Transposase
Number of amino acids: Translated: 102; Mature: 101
Protein sequence:
>102_residues MSHKYERYFCLPSYSRIIQLWHRMLLPLAILMHYLKGEETGIYYIDATKLTICHNKRTSSNRVFNKISKICKSSYGLFLD FKLHLIINNMSKIIKLYVLIFR
Sequences:
>Translated_102_residues MSHKYERYFCLPSYSRIIQLWHRMLLPLAILMHYLKGEETGIYYIDATKLTICHNKRTSSNRVFNKISKICKSSYGLFLD FKLHLIINNMSKIIKLYVLIFR >Mature_101_residues SHKYERYFCLPSYSRIIQLWHRMLLPLAILMHYLKGEETGIYYIDATKLTICHNKRTSSNRVFNKISKICKSSYGLFLDF KLHLIINNMSKIIKLYVLIFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12250; Mature: 12119
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHKYERYFCLPSYSRIIQLWHRMLLPLAILMHYLKGEETGIYYIDATKLTICHNKRTSS CCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEEEEECCCCCC NRVFNKISKICKSSYGLFLDFKLHLIINNMSKIIKLYVLIFR HHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SHKYERYFCLPSYSRIIQLWHRMLLPLAILMHYLKGEETGIYYIDATKLTICHNKRTSS CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEEEEECCCCCC NRVFNKISKICKSSYGLFLDFKLHLIINNMSKIIKLYVLIFR HHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA