Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183347

Identifier: 189183347

GI number: 189183347

Start: 459503

End: 461008

Strand: Direct

Name: 189183347

Synonym: OTT_0440

Alternate gene names: NA

Gene position: 459503-461008 (Clockwise)

Preceding gene: 189183341

Following gene: 189183348

Centisome position: 22.87

GC content: 30.68

Gene sequence:

>1506_bases
ATGACAAATTTTATCCTCAAATATATAGAAAATGCTAATACAAATATAGAAGCTAAAATTGAACAACAGGAATATGTCCA
GCAAAAGTTGTTCATTATGACTCAAACCATAAAAACATCAGACTTTAATATAAAATATGCAATTGCGTACTTAACGCCGT
ATGATCAGCAACTTGTAAAACAAAAATTAATAACCAAATTAACTCCATATTTTAAGGAATATTTTACAAAGTATGGTTGC
GTTGAAGAAGTAAGCGAAAGAATAGCTGAATGGCTTATGAATCAAGAATCGCAGTCTGATAAACCAAAGCTTATAGCATC
AAATTTTGCCAACTTTTTTAACGATAAAAAATTACAAAAGACTATTAAAAATAATATAACAAAGCTAACAACAGATACTC
AGAATCAGTGTAAAGGAATTCTTTACTTAAAAGTTTTGTCACATATAACACCATCTTCACTACAAAATATAACTTCAGGC
GCAATCGATATTTTAAAAACAGAATTAACACAGCGATTTGAAGAAGAATACTTGGCAGAATGTTTTATAGAATGTATAAA
ACCATTTATACACAAATTTGCATGTTTTTTTATTATGCGCACTGCAGAAGATGGACATATTGATATGGCAGATAAGTTCT
CGGATGTTAATGGTTGTATAGAAGATATTTACAAGTTCAAGTTTGATAAGTCAGGCAAAGCTGCAGTTACAAAAATGAAA
TCTGCAATAAATCATTTTATAGAACTAAATCATCTAAATAAGAATTTTTTTACAAGCTTAAGTAGTAAAATGGTTACATT
TATAGAAAAACATAAAGCACAACAGCCTAATTTCATTGCCATGAAAACAGACATTGAGATTGAAAATGGAAAAAGCAACA
GTGACATTCAGTCAATACAATCTGATTTATATTGTGACCTAACTGATATAGAAGATCAAATAGAAGTTGACCTACGAGAT
GCTGGATTGCTATCTGAAGACAATCTACCTCAATCTGAAAAATTGCCTGAAAACATTACAGAGCAAATTAGATTGATACT
TGAAAATCAACAACATGACTTAACTAATAGTGATATTGACAGCGACGATGAGATTATGTTAACAGAAGCTCAAGATTTAG
AACTAGAAAAATTAGTATTGAAAGATGTTCCTCAACCTGAAAAAATGCCTGAAAACATTGCGGAGCAAATTAGATCGACA
CTTGAAAATCAACAACATAACTTAACTAATAGTGATATTGACAGCGACGATGAGATTATGTTAACAGAAGCTGAAGACTT
AGTACTAGCAGAATGGGTATTGGAAGATATTCATCAATCTGAAAAAATGCCTGAAAACATTACAGAGCAGATTAGATTGA
CACTTGAAAACCAACAACATGACTTAACTAATAGTGATATTGACAGCGACGATGAGATTATGTTAACAGAAGCTGAAGAC
TTAGAACTAGAAAAATTGGTATTTGAAAAGCTTCCTAACCATGAGGAAATACCTGACTGGATATAA

Upstream 100 bases:

>100_bases
ATAAATTAGAGCTTAATCTTAACATTTCTTAACTTTTTAGTTGTGTTTTTTAATTATTCATAATATATATATAAAACTTT
AAACTATAAGGTAACAATAT

Downstream 100 bases:

>100_bases
ACTGCTTTTTATTAACTAAAGATGAAACTAAAATGCTATGCCGCAGGTAGATTAGTCTTAAGAGTAAGCACTTATTGCGC
TATGTTATCAGCACAGCATC

Product: repeat-containing protein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 501; Mature: 500

Protein sequence:

>501_residues
MTNFILKYIENANTNIEAKIEQQEYVQQKLFIMTQTIKTSDFNIKYAIAYLTPYDQQLVKQKLITKLTPYFKEYFTKYGC
VEEVSERIAEWLMNQESQSDKPKLIASNFANFFNDKKLQKTIKNNITKLTTDTQNQCKGILYLKVLSHITPSSLQNITSG
AIDILKTELTQRFEEEYLAECFIECIKPFIHKFACFFIMRTAEDGHIDMADKFSDVNGCIEDIYKFKFDKSGKAAVTKMK
SAINHFIELNHLNKNFFTSLSSKMVTFIEKHKAQQPNFIAMKTDIEIENGKSNSDIQSIQSDLYCDLTDIEDQIEVDLRD
AGLLSEDNLPQSEKLPENITEQIRLILENQQHDLTNSDIDSDDEIMLTEAQDLELEKLVLKDVPQPEKMPENIAEQIRST
LENQQHNLTNSDIDSDDEIMLTEAEDLVLAEWVLEDIHQSEKMPENITEQIRLTLENQQHDLTNSDIDSDDEIMLTEAED
LELEKLVFEKLPNHEEIPDWI

Sequences:

>Translated_501_residues
MTNFILKYIENANTNIEAKIEQQEYVQQKLFIMTQTIKTSDFNIKYAIAYLTPYDQQLVKQKLITKLTPYFKEYFTKYGC
VEEVSERIAEWLMNQESQSDKPKLIASNFANFFNDKKLQKTIKNNITKLTTDTQNQCKGILYLKVLSHITPSSLQNITSG
AIDILKTELTQRFEEEYLAECFIECIKPFIHKFACFFIMRTAEDGHIDMADKFSDVNGCIEDIYKFKFDKSGKAAVTKMK
SAINHFIELNHLNKNFFTSLSSKMVTFIEKHKAQQPNFIAMKTDIEIENGKSNSDIQSIQSDLYCDLTDIEDQIEVDLRD
AGLLSEDNLPQSEKLPENITEQIRLILENQQHDLTNSDIDSDDEIMLTEAQDLELEKLVLKDVPQPEKMPENIAEQIRST
LENQQHNLTNSDIDSDDEIMLTEAEDLVLAEWVLEDIHQSEKMPENITEQIRLTLENQQHDLTNSDIDSDDEIMLTEAED
LELEKLVFEKLPNHEEIPDWI
>Mature_500_residues
TNFILKYIENANTNIEAKIEQQEYVQQKLFIMTQTIKTSDFNIKYAIAYLTPYDQQLVKQKLITKLTPYFKEYFTKYGCV
EEVSERIAEWLMNQESQSDKPKLIASNFANFFNDKKLQKTIKNNITKLTTDTQNQCKGILYLKVLSHITPSSLQNITSGA
IDILKTELTQRFEEEYLAECFIECIKPFIHKFACFFIMRTAEDGHIDMADKFSDVNGCIEDIYKFKFDKSGKAAVTKMKS
AINHFIELNHLNKNFFTSLSSKMVTFIEKHKAQQPNFIAMKTDIEIENGKSNSDIQSIQSDLYCDLTDIEDQIEVDLRDA
GLLSEDNLPQSEKLPENITEQIRLILENQQHDLTNSDIDSDDEIMLTEAQDLELEKLVLKDVPQPEKMPENIAEQIRSTL
ENQQHNLTNSDIDSDDEIMLTEAEDLVLAEWVLEDIHQSEKMPENITEQIRLTLENQQHDLTNSDIDSDDEIMLTEAEDL
ELEKLVFEKLPNHEEIPDWI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58135; Mature: 58004

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNFILKYIENANTNIEAKIEQQEYVQQKLFIMTQTIKTSDFNIKYAIAYLTPYDQQLVK
CCHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHH
QKLITKLTPYFKEYFTKYGCVEEVSERIAEWLMNQESQSDKPKLIASNFANFFNDKKLQK
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
TIKNNITKLTTDTQNQCKGILYLKVLSHITPSSLQNITSGAIDILKTELTQRFEEEYLAE
HHHCCCCEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CFIECIKPFIHKFACFFIMRTAEDGHIDMADKFSDVNGCIEDIYKFKFDKSGKAAVTKMK
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
SAINHFIELNHLNKNFFTSLSSKMVTFIEKHKAQQPNFIAMKTDIEIENGKSNSDIQSIQ
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCHHHHHHH
SDLYCDLTDIEDQIEVDLRDAGLLSEDNLPQSEKLPENITEQIRLILENQQHDLTNSDID
HHHCCCCCCCCCHHEEEHHHCCCCCCCCCCCHHCCCHHHHHHHHHHHHCCCCCCCCCCCC
SDDEIMLTEAQDLELEKLVLKDVPQPEKMPENIAEQIRSTLENQQHNLTNSDIDSDDEIM
CCCCEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEE
LTEAEDLVLAEWVLEDIHQSEKMPENITEQIRLTLENQQHDLTNSDIDSDDEIMLTEAED
EECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCC
LELEKLVFEKLPNHEEIPDWI
CHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TNFILKYIENANTNIEAKIEQQEYVQQKLFIMTQTIKTSDFNIKYAIAYLTPYDQQLVK
CHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHH
QKLITKLTPYFKEYFTKYGCVEEVSERIAEWLMNQESQSDKPKLIASNFANFFNDKKLQK
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
TIKNNITKLTTDTQNQCKGILYLKVLSHITPSSLQNITSGAIDILKTELTQRFEEEYLAE
HHHCCCCEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CFIECIKPFIHKFACFFIMRTAEDGHIDMADKFSDVNGCIEDIYKFKFDKSGKAAVTKMK
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
SAINHFIELNHLNKNFFTSLSSKMVTFIEKHKAQQPNFIAMKTDIEIENGKSNSDIQSIQ
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCHHHHHHH
SDLYCDLTDIEDQIEVDLRDAGLLSEDNLPQSEKLPENITEQIRLILENQQHDLTNSDID
HHHCCCCCCCCCHHEEEHHHCCCCCCCCCCCHHCCCHHHHHHHHHHHHCCCCCCCCCCCC
SDDEIMLTEAQDLELEKLVLKDVPQPEKMPENIAEQIRSTLENQQHNLTNSDIDSDDEIM
CCCCEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEE
LTEAEDLVLAEWVLEDIHQSEKMPENITEQIRLTLENQQHDLTNSDIDSDDEIMLTEAED
EECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCC
LELEKLVFEKLPNHEEIPDWI
CHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA