| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183281
Identifier: 189183281
GI number: 189183281
Start: 386341
End: 386847
Strand: Direct
Name: 189183281
Synonym: OTT_0374
Alternate gene names: NA
Gene position: 386341-386847 (Clockwise)
Preceding gene: 189183280
Following gene: 189183283
Centisome position: 19.23
GC content: 29.19
Gene sequence:
>507_bases GTGTTAAGGAATGAATTTATCGAGAAGGTAAAGCAAATTTCTAAAGAAAATCTAGTATTTATTGATGAGTCAGGAATAGA GGATAATGCTTGTAGAGAATATGGATGGAGTATAAAAGGTACTAGATGTTATGGCAATAAAGCTTATCAACATAAATCCA GGGTCAGTATGATAGCAGGGCTTTGTAATAATCAAATTATAGCACCAGTAATATTTGAAGGAAATTGTAATAAAGCAATA TTTACAACTTATGTAGAAACTATATTAATCAAAGAATTGAGTCCTGGACAAATAGTAATTATGGATAATATCAACTTTCA TAAGAATACTATAATTAAAGTATTAATAGAATCGGTTGGCTGCGGTATTCTATTCTTACCTACATATAGTCCAGATTTAA ATCCTATAGAACATTATTGGTTTAAGATTAAGAACGAAATAAGAAAAGTTACTCCTCAATTCAAAGATATTAGCATTGCT GTAGCACACTTAATGAAGTTTATCTGA
Upstream 100 bases:
>100_bases ATACTAGGTAATAGATTACAAAGAACTAGAATAAATTATTATAGAAAACTACTAGGATACACTTATAAAAAAAACTCATT TTCATTCCAAAAGGGATATT
Downstream 100 bases:
>100_bases TTGTACCTATTTCCTACGTTCGTGCTATATTCTAAGGCCATCAGCAACTGTTCCTCCAAATTAAGCTTATTTTTACGCCC ACCTTTTGATTTCTTAAGAC
Product: transposase
Products: NA
Alternate protein names: Transposase Of Insertion Sequence; Transposase And Inactivated Derivatives-Like Protein; ISSpo6 Transposase OrfB; LOW QUALITY PROTEIN Transposase; Insertion Sequence Transposase Protein; Transposase For Insertion Sequence Element; Degenerate Transposase; Transposase Family Protein; Transposase IS; ISRin2 Transposase OrfB; ISSoc4 Transposase OrfAB; ISHde1 Transposase OrfB; Transposase And Inactivated Derivative; Transposase Fragment
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MLRNEFIEKVKQISKENLVFIDESGIEDNACREYGWSIKGTRCYGNKAYQHKSRVSMIAGLCNNQIIAPVIFEGNCNKAI FTTYVETILIKELSPGQIVIMDNINFHKNTIIKVLIESVGCGILFLPTYSPDLNPIEHYWFKIKNEIRKVTPQFKDISIA VAHLMKFI
Sequences:
>Translated_168_residues MLRNEFIEKVKQISKENLVFIDESGIEDNACREYGWSIKGTRCYGNKAYQHKSRVSMIAGLCNNQIIAPVIFEGNCNKAI FTTYVETILIKELSPGQIVIMDNINFHKNTIIKVLIESVGCGILFLPTYSPDLNPIEHYWFKIKNEIRKVTPQFKDISIA VAHLMKFI >Mature_168_residues MLRNEFIEKVKQISKENLVFIDESGIEDNACREYGWSIKGTRCYGNKAYQHKSRVSMIAGLCNNQIIAPVIFEGNCNKAI FTTYVETILIKELSPGQIVIMDNINFHKNTIIKVLIESVGCGILFLPTYSPDLNPIEHYWFKIKNEIRKVTPQFKDISIA VAHLMKFI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19273; Mature: 19273
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRNEFIEKVKQISKENLVFIDESGIEDNACREYGWSIKGTRCYGNKAYQHKSRVSMIAG CCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHCCCCCCEEEECCHHHHHHHHHHHHHH LCNNQIIAPVIFEGNCNKAIFTTYVETILIKELSPGQIVIMDNINFHKNTIIKVLIESVG HHCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHC CGILFLPTYSPDLNPIEHYWFKIKNEIRKVTPQFKDISIAVAHLMKFI CCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC >Mature Secondary Structure MLRNEFIEKVKQISKENLVFIDESGIEDNACREYGWSIKGTRCYGNKAYQHKSRVSMIAG CCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHCCCCCCEEEECCHHHHHHHHHHHHHH LCNNQIIAPVIFEGNCNKAIFTTYVETILIKELSPGQIVIMDNINFHKNTIIKVLIESVG HHCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHC CGILFLPTYSPDLNPIEHYWFKIKNEIRKVTPQFKDISIAVAHLMKFI CCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA