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The map label for this gene is tpn39b

Identifier: 189026239

GI number: 189026239

Start: 1108224

End: 1109309

Strand: Reverse

Name: tpn39b

Synonym: TPASS_1016

Alternate gene names: 189026239

Gene position: 1109309-1108224 (Counterclockwise)

Preceding gene: 189026240

Following gene: 189026238

Centisome position: 97.35

GC content: 49.45

Gene sequence:

>1086_bases
ATGGGCAGATACATAGTTCCCGCTCTGTTGTGCGTGGCGGGTATGGGGTTTGCGCACGCGCAGTCGGCGCTGCAGCCTAT
CGCCGAAGTGAATTTATTCCGGCGTGAGCCGGTGACGCTCGGACAGATTAAGGCAAGAATTTCTGCGATTGAGAAAGAGA
TGGGAAAGAAGCTCAGCACTGCTGAGCGTAGACAATTCATGGACAGTCTTATTGACGAAAAGCTTTTTGCTCAAGCGGCA
GAAAAGGCGGGTATCCAGGTAACGGATGCTGAAGTGAATCAGTATTTTAATGGAATGCTTTCTCAACAGATTGGACGTGC
GGTAACGGAGGCTGAGTTCGCCAATTACGTCAAGGAGAAGCAGAATATCTCGCTCGATCAGTTCATGAAGCAGCAAAACG
GCATGACTATGGCAGAATACAAAAAGTTTCTAAAGACGCAGGTGAGCACGCAGCGCTACGTGGCACAAAAGAAGGCAGAC
GAGTTTCGGAATTTGAAGGGACCTGAGGACTCTCAAATCCGTTCCTACTACGAGCTTAATAAACAGGCCTTTTTCCGCCC
TGACACGGTTAAGTTGTTTCTTATTTCTGTCCCGAAGGGTTCAGGTCCTGCTGCTGCAAAGGCGAAAGCGCAAGAGTTTG
TTAAGAAACTTAAAAGTTCCGGTGTCAAAGCCACGGCTGACATTAAGAGTAAGGCAAATGGTGCACAGGCGGGTTACTCT
GCCGGGGAAATATACCTGGGGAAGACTGCGGTTACTGCCACGCAGCTTGGTCTGACGATGGAGGCGTTGCTTGAAATTTT
TGGCATGGGAGTTGGTGCTGTTTCGGACGTGAATGAAACGGCTAATGACTATCAGTGCTTCATAGTTTTGAAGAAAGAGG
AAGCGAAGATCCTAACGCTCAGCGATTTGGTGGAGCCTGACAAGACCGTCTCGCTTTACGAGTTTATCAAGAATCTTCTT
ACTTCCCAAATCCAACAAAAAGCGCTCGAGGACGCTATCCGGGAAGTGTCGGCGGAGCTGAGGAAGTCTGGTACCTATAA
GGTATTCTTGGCTGACGCAGAGCTCGGCAAGGTGCTCGACTGGTGA

Upstream 100 bases:

>100_bases
TCTTGAGAAAAGCGGGGAAAAGTCGTAACTTGCCCTGCTGCGTATAGTTTCTCCGGCGTGTGTGCTGGTGACTGAGTCGC
GGTTGTTACGGGGAGTTCTC

Downstream 100 bases:

>100_bases
GTGAAGTATTCCCAAAGATAGGGAGGAGGCGCGCTCGGATTCTGGCTTTTCAGGCTCTCTTTGCCTGGGACGCGGCGGGC
ATCACGCCGGAGACGTTAAC

Product: basic membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 360

Protein sequence:

>361_residues
MGRYIVPALLCVAGMGFAHAQSALQPIAEVNLFRREPVTLGQIKARISAIEKEMGKKLSTAERRQFMDSLIDEKLFAQAA
EKAGIQVTDAEVNQYFNGMLSQQIGRAVTEAEFANYVKEKQNISLDQFMKQQNGMTMAEYKKFLKTQVSTQRYVAQKKAD
EFRNLKGPEDSQIRSYYELNKQAFFRPDTVKLFLISVPKGSGPAAAKAKAQEFVKKLKSSGVKATADIKSKANGAQAGYS
AGEIYLGKTAVTATQLGLTMEALLEIFGMGVGAVSDVNETANDYQCFIVLKKEEAKILTLSDLVEPDKTVSLYEFIKNLL
TSQIQQKALEDAIREVSAELRKSGTYKVFLADAELGKVLDW

Sequences:

>Translated_361_residues
MGRYIVPALLCVAGMGFAHAQSALQPIAEVNLFRREPVTLGQIKARISAIEKEMGKKLSTAERRQFMDSLIDEKLFAQAA
EKAGIQVTDAEVNQYFNGMLSQQIGRAVTEAEFANYVKEKQNISLDQFMKQQNGMTMAEYKKFLKTQVSTQRYVAQKKAD
EFRNLKGPEDSQIRSYYELNKQAFFRPDTVKLFLISVPKGSGPAAAKAKAQEFVKKLKSSGVKATADIKSKANGAQAGYS
AGEIYLGKTAVTATQLGLTMEALLEIFGMGVGAVSDVNETANDYQCFIVLKKEEAKILTLSDLVEPDKTVSLYEFIKNLL
TSQIQQKALEDAIREVSAELRKSGTYKVFLADAELGKVLDW
>Mature_360_residues
GRYIVPALLCVAGMGFAHAQSALQPIAEVNLFRREPVTLGQIKARISAIEKEMGKKLSTAERRQFMDSLIDEKLFAQAAE
KAGIQVTDAEVNQYFNGMLSQQIGRAVTEAEFANYVKEKQNISLDQFMKQQNGMTMAEYKKFLKTQVSTQRYVAQKKADE
FRNLKGPEDSQIRSYYELNKQAFFRPDTVKLFLISVPKGSGPAAAKAKAQEFVKKLKSSGVKATADIKSKANGAQAGYSA
GEIYLGKTAVTATQLGLTMEALLEIFGMGVGAVSDVNETANDYQCFIVLKKEEAKILTLSDLVEPDKTVSLYEFIKNLLT
SQIQQKALEDAIREVSAELRKSGTYKVFLADAELGKVLDW

Specific function: Unknown

COG id: COG0760

COG function: function code O; Parvulin-like peptidyl-prolyl isomerase

Gene ontology:

Cell location: Cell membrane (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): BMP_TREPA (P29725)

Other databases:

- EMBL:   M17716
- EMBL:   AE000520
- PIR:   A43510
- RefSeq:   NP_219453.1
- ProteinModelPortal:   P29725
- IntAct:   P29725
- GeneID:   2610857
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP1016
- NMPDR:   fig|243276.1.peg.1011
- TIGR:   TP_1016
- HOGENOM:   HBG250901
- OMA:   SASIQIL
- ProtClustDB:   CLSK695855
- BioCyc:   TPAL243276:TP_1016-MONOMER
- InterPro:   IPR008880

Pfam domain/function: SSF109998 Trigger_fac_C_bac

EC number: NA

Molecular weight: Translated: 39936; Mature: 39805

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRYIVPALLCVAGMGFAHAQSALQPIAEVNLFRREPVTLGQIKARISAIEKEMGKKLST
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
AERRQFMDSLIDEKLFAQAAEKAGIQVTDAEVNQYFNGMLSQQIGRAVTEAEFANYVKEK
HHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QNISLDQFMKQQNGMTMAEYKKFLKTQVSTQRYVAQKKADEFRNLKGPEDSQIRSYYELN
CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC
KQAFFRPDTVKLFLISVPKGSGPAAAKAKAQEFVKKLKSSGVKATADIKSKANGAQAGYS
HHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEHHHHHCCCCCCCCCC
AGEIYLGKTAVTATQLGLTMEALLEIFGMGVGAVSDVNETANDYQCFIVLKKEEAKILTL
CCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEEEEEEEECCCCEEEH
SDLVEPDKTVSLYEFIKNLLTSQIQQKALEDAIREVSAELRKSGTYKVFLADAELGKVLD
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHCC
W
C
>Mature Secondary Structure 
GRYIVPALLCVAGMGFAHAQSALQPIAEVNLFRREPVTLGQIKARISAIEKEMGKKLST
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
AERRQFMDSLIDEKLFAQAAEKAGIQVTDAEVNQYFNGMLSQQIGRAVTEAEFANYVKEK
HHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QNISLDQFMKQQNGMTMAEYKKFLKTQVSTQRYVAQKKADEFRNLKGPEDSQIRSYYELN
CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC
KQAFFRPDTVKLFLISVPKGSGPAAAKAKAQEFVKKLKSSGVKATADIKSKANGAQAGYS
HHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEHHHHHCCCCCCCCCC
AGEIYLGKTAVTATQLGLTMEALLEIFGMGVGAVSDVNETANDYQCFIVLKKEEAKILTL
CCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEEEEEEEECCCCEEEH
SDLVEPDKTVSLYEFIKNLLTSQIQQKALEDAIREVSAELRKSGTYKVFLADAELGKVLD
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHCC
W
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3552988; 9665876