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The map label for this gene is ytfL [C]

Identifier: 189026159

GI number: 189026159

Start: 1019049

End: 1020122

Strand: Reverse

Name: ytfL [C]

Synonym: TPASS_0936

Alternate gene names: 189026159

Gene position: 1020122-1019049 (Counterclockwise)

Preceding gene: 189026160

Following gene: 189026158

Centisome position: 89.53

GC content: 52.23

Gene sequence:

>1074_bases
GTGGAGAAGTGTGAGTCGCAGCCGTATGAAATTTTTATTACAATTGGGTTTGTGGGCCAGCGTATGAAGTGGGATTGGGC
AGCGAATATTTTTTCTTTGCTTATGGGGAAAAGCTGGCAGCGGCAACGCGCACGCGCCTCTATGCTGCAGATGTCGTACG
CTGATTGTGCTGTGTGTTTCGATCAGGGAATTGGAAGCTACATGGTGCACCGTACCGATATTGTATGGGTCGAGGCGCGC
GCACTCCCTTCTCATATTTTCTCGATGATCTCGCAGCATGACGATTACAACTATTTTCCTGTGTGTGCTCGTACGATTGA
CGCAGTCGTGGGCTATTTTTCTGTGCAACGGTATGTGCGCGTATGTCTTGAAATGGAACGGAGCGCGGGAGCCTCTCGTG
AGCAGGATGAGCAAGAGTCTGTTGCAAGCGCATTGCATGTTCACATGGAGGGTCGGCGGCACGCTCATGCAAAAGGACAG
GGGGTGTGGATCGCAGATCCGGTGATAGCGCGTATAGTGCAGCAGCCGATTTTTGTACCTGAGGTAATAAGTGTGCGTAA
GCTGTTGCATCTTTTTCAACAGATGCAGGCTCAGATGGCGTTTGTAATTGACGAGTACGGAGGGATTGAGGGAATGGTAA
CGCGTGATGAGTTGATTATGCGTTGCGTTCAGGAGTATGCGCGTGCCGACGGGATCAATAGTGAGGATTGTTTTCAGAAC
CCTGACGGTAGCTGGATCGTTAGCGGATGGATGAATTTAAACGAAATGTATCGTCTCGGGGTTCTGGCGCGGACGACGCG
GCCACACACGGGTGTGCACACGATCGCCGGTTATGTGCTGAGCATACGCAATCGAATCCCGCGTGTAAAAGAACAGTTAA
ATGCGAACGGATGCCGATTTACTATCTTGAAAATGGACGGTAGGCGCATCGATCGGCTCCTGGTTGAGCGAGAGCACCCC
GTCCCCTCTACGAGCGGGGAGGTCCCCTCAAAGGGAGGGGGAAAAGAGACGGGCGACCCGCTATCGTCCCCCCGCTTTGC
CAAAAACAGAAAAAATGGGCCAGGTCTGAAATAG

Upstream 100 bases:

>100_bases
GGTTCACACGGGTATCCAAAACGCGTGGTCGGCTGCTTTGTGCTCGCTGCACTCTCCTTTTGAAAGGCAGCGCGCCTTTT
AAAATAGCGTTTGGTGCGAG

Downstream 100 bases:

>100_bases
AGGAGCTCCTGGGCAATACTGGGATCGAACCAGTGACCCCAAGCGTGTCATGCTTGTACTCTAACCAGCTGAGCTAATTG
CCCTAACGAAACCGGGGCCG

Product: hemolysin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MEKCESQPYEIFITIGFVGQRMKWDWAANIFSLLMGKSWQRQRARASMLQMSYADCAVCFDQGIGSYMVHRTDIVWVEAR
ALPSHIFSMISQHDDYNYFPVCARTIDAVVGYFSVQRYVRVCLEMERSAGASREQDEQESVASALHVHMEGRRHAHAKGQ
GVWIADPVIARIVQQPIFVPEVISVRKLLHLFQQMQAQMAFVIDEYGGIEGMVTRDELIMRCVQEYARADGINSEDCFQN
PDGSWIVSGWMNLNEMYRLGVLARTTRPHTGVHTIAGYVLSIRNRIPRVKEQLNANGCRFTILKMDGRRIDRLLVEREHP
VPSTSGEVPSKGGGKETGDPLSSPRFAKNRKNGPGLK

Sequences:

>Translated_357_residues
MEKCESQPYEIFITIGFVGQRMKWDWAANIFSLLMGKSWQRQRARASMLQMSYADCAVCFDQGIGSYMVHRTDIVWVEAR
ALPSHIFSMISQHDDYNYFPVCARTIDAVVGYFSVQRYVRVCLEMERSAGASREQDEQESVASALHVHMEGRRHAHAKGQ
GVWIADPVIARIVQQPIFVPEVISVRKLLHLFQQMQAQMAFVIDEYGGIEGMVTRDELIMRCVQEYARADGINSEDCFQN
PDGSWIVSGWMNLNEMYRLGVLARTTRPHTGVHTIAGYVLSIRNRIPRVKEQLNANGCRFTILKMDGRRIDRLLVEREHP
VPSTSGEVPSKGGGKETGDPLSSPRFAKNRKNGPGLK
>Mature_357_residues
MEKCESQPYEIFITIGFVGQRMKWDWAANIFSLLMGKSWQRQRARASMLQMSYADCAVCFDQGIGSYMVHRTDIVWVEAR
ALPSHIFSMISQHDDYNYFPVCARTIDAVVGYFSVQRYVRVCLEMERSAGASREQDEQESVASALHVHMEGRRHAHAKGQ
GVWIADPVIARIVQQPIFVPEVISVRKLLHLFQQMQAQMAFVIDEYGGIEGMVTRDELIMRCVQEYARADGINSEDCFQN
PDGSWIVSGWMNLNEMYRLGVLARTTRPHTGVHTIAGYVLSIRNRIPRVKEQLNANGCRFTILKMDGRRIDRLLVEREHP
VPSTSGEVPSKGGGKETGDPLSSPRFAKNRKNGPGLK

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Escherichia coli, GI87082033, Length=146, Percent_Identity=26.7123287671233, Blast_Score=66, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 40515; Mature: 40515

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKCESQPYEIFITIGFVGQRMKWDWAANIFSLLMGKSWQRQRARASMLQMSYADCAVCF
CCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
DQGIGSYMVHRTDIVWVEARALPSHIFSMISQHDDYNYFPVCARTIDAVVGYFSVQRYVR
HHCCCHHHEEECEEEEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VCLEMERSAGASREQDEQESVASALHVHMEGRRHAHAKGQGVWIADPVIARIVQQPIFVP
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCCEEEECHHHHHHHHCCCCCH
EVISVRKLLHLFQQMQAQMAFVIDEYGGIEGMVTRDELIMRCVQEYARADGINSEDCFQN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHCCCCCHHHCCC
PDGSWIVSGWMNLNEMYRLGVLARTTRPHTGVHTIAGYVLSIRNRIPRVKEQLNANGCRF
CCCCEEEECHHCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHCCCCCEE
TILKMDGRRIDRLLVEREHPVPSTSGEVPSKGGGKETGDPLSSPRFAKNRKNGPGLK
EEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCC
>Mature Secondary Structure
MEKCESQPYEIFITIGFVGQRMKWDWAANIFSLLMGKSWQRQRARASMLQMSYADCAVCF
CCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
DQGIGSYMVHRTDIVWVEARALPSHIFSMISQHDDYNYFPVCARTIDAVVGYFSVQRYVR
HHCCCHHHEEECEEEEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VCLEMERSAGASREQDEQESVASALHVHMEGRRHAHAKGQGVWIADPVIARIVQQPIFVP
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCCEEEECHHHHHHHHCCCCCH
EVISVRKLLHLFQQMQAQMAFVIDEYGGIEGMVTRDELIMRCVQEYARADGINSEDCFQN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHCCCCCHHHCCC
PDGSWIVSGWMNLNEMYRLGVLARTTRPHTGVHTIAGYVLSIRNRIPRVKEQLNANGCRF
CCCCEEEECHHCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHCCCCCEE
TILKMDGRRIDRLLVEREHPVPSTSGEVPSKGGGKETGDPLSSPRFAKNRKNGPGLK
EEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]