Definition Treponema pallidum subsp. pallidum SS14, complete genome.
Accession NC_010741
Length 1,139,457

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The map label for this gene is yfcE [C]

Identifier: 189026160

GI number: 189026160

Start: 1020294

End: 1020929

Strand: Reverse

Name: yfcE [C]

Synonym: TPASS_0937

Alternate gene names: 189026160

Gene position: 1020929-1020294 (Counterclockwise)

Preceding gene: 189026161

Following gene: 189026159

Centisome position: 89.6

GC content: 53.62

Gene sequence:

>636_bases
GTGAATACGCTTGAGATGACTGCACCGGGAGTGATAGGGGGTCGGGAGTCGATTGCCTCATTGCATATGCTGTCTTGTGC
GCGTTTGTTGCTGGTTTCCGATACGCACGGCAGCGCGGAGGCCTTGACCGCGGTGGTAGATCAGTTTGGTTCTTGTGCAG
ATGCCCTTCTTTTTGCAGGGGACGGGATTGGGGATGTGTTGTATCTCTGCCAAAGGGGACGACGTAATCGTGTGCTGAGG
GAGCGTATTCCAGGTGTTATTTTTATGGTTGCAGGAAATTGTGATCGTGCTTCGCACATACCCTTATGTGGACGTATCCA
GGTGGCAGATGTTACGCTCTTTCTAGCGCACGGTCACACCCATTCGGTGAATGTGAGCGATAGTGTGCTCGTTTCCCAAG
CACTGCAGGCGTGTTGTAGTATTGCGGTGCATGGACATACCCACGTGCAAAGGGCGTGTGTAAGTAGCCGCGTGCTTATA
ATCAATCCGGGTAGTCTCGAGCATGCGCGAGGAAGCTCGCACGCAGGATTTGCTCTGTTGCACGTAATGAATAGCGCACA
CACACGCACGGTGTTCTACCGGACGCGGCGGCAGGGGCATAGATATCTTTTTGAGGAAACGGTGCCACGCGTGTAA

Upstream 100 bases:

>100_bases
CCTACAATCATGTGTTGCTGTCAAAACGGGTAGAAACGTTCAGATTTGTGCGTTCGTATGGTGGCAGTCCGGGAAGGAGC
GTACACGAAAGGGATAGAAT

Downstream 100 bases:

>100_bases
ACTGTAGGTAGTTCTTGAAAATAACGAAGAGTTGGTTGCATATGTCTTACCCGGCAGTGCGTTGCATGCGAGGTTCACAC
GGGTATCCAAAACGCGTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: Phosphoesterase; Metallophosphoesterase YsnB

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MNTLEMTAPGVIGGRESIASLHMLSCARLLLVSDTHGSAEALTAVVDQFGSCADALLFAGDGIGDVLYLCQRGRRNRVLR
ERIPGVIFMVAGNCDRASHIPLCGRIQVADVTLFLAHGHTHSVNVSDSVLVSQALQACCSIAVHGHTHVQRACVSSRVLI
INPGSLEHARGSSHAGFALLHVMNSAHTRTVFYRTRRQGHRYLFEETVPRV

Sequences:

>Translated_211_residues
MNTLEMTAPGVIGGRESIASLHMLSCARLLLVSDTHGSAEALTAVVDQFGSCADALLFAGDGIGDVLYLCQRGRRNRVLR
ERIPGVIFMVAGNCDRASHIPLCGRIQVADVTLFLAHGHTHSVNVSDSVLVSQALQACCSIAVHGHTHVQRACVSSRVLI
INPGSLEHARGSSHAGFALLHVMNSAHTRTVFYRTRRQGHRYLFEETVPRV
>Mature_211_residues
MNTLEMTAPGVIGGRESIASLHMLSCARLLLVSDTHGSAEALTAVVDQFGSCADALLFAGDGIGDVLYLCQRGRRNRVLR
ERIPGVIFMVAGNCDRASHIPLCGRIQVADVTLFLAHGHTHSVNVSDSVLVSQALQACCSIAVHGHTHVQRACVSSRVLI
INPGSLEHARGSSHAGFALLHVMNSAHTRTVFYRTRRQGHRYLFEETVPRV

Specific function: Unknown

COG id: COG0622

COG function: function code R; Predicted phosphoesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22800; Mature: 22800

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTLEMTAPGVIGGRESIASLHMLSCARLLLVSDTHGSAEALTAVVDQFGSCADALLFAG
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHCCHHHHHHCCC
DGIGDVLYLCQRGRRNRVLRERIPGVIFMVAGNCDRASHIPLCGRIQVADVTLFLAHGHT
CCHHHHHHHHHCCCCCCHHHHHCCCEEEEEECCCCCCCCCCCCCEEEEEEEEEEEECCCC
HSVNVSDSVLVSQALQACCSIAVHGHTHVQRACVSSRVLIINPGSLEHARGSSHAGFALL
EECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEECCCCCCCCCCCCCCCHHHH
HVMNSAHTRTVFYRTRRQGHRYLFEETVPRV
HHHHCCCHHHHHHHHHHCCCHHHHHHHCCCC
>Mature Secondary Structure
MNTLEMTAPGVIGGRESIASLHMLSCARLLLVSDTHGSAEALTAVVDQFGSCADALLFAG
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHCCHHHHHHCCC
DGIGDVLYLCQRGRRNRVLRERIPGVIFMVAGNCDRASHIPLCGRIQVADVTLFLAHGHT
CCHHHHHHHHHCCCCCCHHHHHCCCEEEEEECCCCCCCCCCCCCEEEEEEEEEEEECCCC
HSVNVSDSVLVSQALQACCSIAVHGHTHVQRACVSSRVLIINPGSLEHARGSSHAGFALL
EECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEECCCCCCCCCCCCCCCHHHH
HVMNSAHTRTVFYRTRRQGHRYLFEETVPRV
HHHHCCCHHHHHHHHHHCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA