Definition Treponema pallidum subsp. pallidum SS14, complete genome.
Accession NC_010741
Length 1,139,457

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The map label for this gene is 189025825

Identifier: 189025825

GI number: 189025825

Start: 652362

End: 653018

Strand: Reverse

Name: 189025825

Synonym: TPASS_0599

Alternate gene names: NA

Gene position: 653018-652362 (Counterclockwise)

Preceding gene: 189025826

Following gene: 189025824

Centisome position: 57.31

GC content: 48.1

Gene sequence:

>657_bases
GTGATGCAGTTACGGTGTGCGTGTGAGCGGGTGTTCGATATTGAACATGAGACGGTAATTTCGCTTGATGAGCACCCGGA
ATTTGTTGCGCGTATACAGCAGGGGGATTTTTTAAGTTACCAGTGTCCGGCATGTGGTGCGCGTATTCGTGCCGAAATAA
AAACAGAATTTGTGTGGCATGCGAAGAATGTGCATTTGCTTTTGGTTCCTGAGCGAGAGCGTTTGCGGTGTTTGGCTTTT
TGTGCCGGTATGCATATGAGCGACGGAGATAGTGCTGACTTTTGTGAACCCTTTGTCTTACGGGAGCACCAGACACCCGT
GATTGGCTACGCAGAACTTGCTGATCGTGTTGCAATACTAGCATGGGATTTGAACCCTGAAATTGTTGAAGCAGTAAAGT
TTTTTGTGTTGGAAGGGGCACCGCATCTAGGAGACAAGAGAGTTTCGTGTTTTTTTGAACGTTGTGTCGGGGACACCGGA
TCGCGCGTGATGGAGTTGCACGTGTACGGTATCAGAGAACAACAAACGGCAATTATGCCGGTTCCCATGAATGTGTATGA
ACGCGTTGAGCGAGAGCGAGGTAAACAAGCGGAGTTGTTTGAGGCGCTGTATGTTGGGGCGTATCTTTCATACAAGAATG
TTTTTACTGACGCGTAG

Upstream 100 bases:

>100_bases
TGTGTTGTACTATCTGCAGTTTGTAGGTTTTGCGTTTGTTGCATTGATATTTTTATGTGCGTTTTGGAACGACGTGAATT
TTTTGTTTCACTAGGAGTGA

Downstream 100 bases:

>100_bases
CSCCGCACAGCGAGCAGCATCTGGTGTGCGTGGTGTATGGGGTGTTGTACGCTTGGGCTTTTTGCAGACAGTGTAGAGAA
GCGCGCAGCGAAGGATGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MMQLRCACERVFDIEHETVISLDEHPEFVARIQQGDFLSYQCPACGARIRAEIKTEFVWHAKNVHLLLVPERERLRCLAF
CAGMHMSDGDSADFCEPFVLREHQTPVIGYAELADRVAILAWDLNPEIVEAVKFFVLEGAPHLGDKRVSCFFERCVGDTG
SRVMELHVYGIREQQTAIMPVPMNVYERVERERGKQAELFEALYVGAYLSYKNVFTDA

Sequences:

>Translated_218_residues
MMQLRCACERVFDIEHETVISLDEHPEFVARIQQGDFLSYQCPACGARIRAEIKTEFVWHAKNVHLLLVPERERLRCLAF
CAGMHMSDGDSADFCEPFVLREHQTPVIGYAELADRVAILAWDLNPEIVEAVKFFVLEGAPHLGDKRVSCFFERCVGDTG
SRVMELHVYGIREQQTAIMPVPMNVYERVERERGKQAELFEALYVGAYLSYKNVFTDA
>Mature_218_residues
MMQLRCACERVFDIEHETVISLDEHPEFVARIQQGDFLSYQCPACGARIRAEIKTEFVWHAKNVHLLLVPERERLRCLAF
CAGMHMSDGDSADFCEPFVLREHQTPVIGYAELADRVAILAWDLNPEIVEAVKFFVLEGAPHLGDKRVSCFFERCVGDTG
SRVMELHVYGIREQQTAIMPVPMNVYERVERERGKQAELFEALYVGAYLSYKNVFTDA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y599_TREPA (O83608)

Other databases:

- EMBL:   AE000520
- PIR:   A71304
- RefSeq:   NP_219037.1
- ProteinModelPortal:   O83608
- GeneID:   2611216
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0599
- NMPDR:   fig|243276.1.peg.596
- TIGR:   TP_0599
- HOGENOM:   HBG732062
- OMA:   QNIFTEG
- ProtClustDB:   CLSK218779
- BioCyc:   TPAL243276:TP_0599-MONOMER
- GO:   GO:0005622
- InterPro:   IPR015880
- SMART:   SM00355

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24978; Mature: 24978

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMQLRCACERVFDIEHETVISLDEHPEFVARIQQGDFLSYQCPACGARIRAEIKTEFVWH
CCCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHEEEEE
AKNVHLLLVPERERLRCLAFCAGMHMSDGDSADFCEPFVLREHQTPVIGYAELADRVAIL
ECCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCEEEHHHHHCCEEEE
AWDLNPEIVEAVKFFVLEGAPHLGDKRVSCFFERCVGDTGSRVMELHVYGIREQQTAIMP
EECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCEEEE
VPMNVYERVERERGKQAELFEALYVGAYLSYKNVFTDA
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMQLRCACERVFDIEHETVISLDEHPEFVARIQQGDFLSYQCPACGARIRAEIKTEFVWH
CCCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHEEEEE
AKNVHLLLVPERERLRCLAFCAGMHMSDGDSADFCEPFVLREHQTPVIGYAELADRVAIL
ECCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCEEEHHHHHCCEEEE
AWDLNPEIVEAVKFFVLEGAPHLGDKRVSCFFERCVGDTGSRVMELHVYGIREQQTAIMP
EECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCEEEE
VPMNVYERVERERGKQAELFEALYVGAYLSYKNVFTDA
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876