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The map label for this gene is 188586579

Identifier: 188586579

GI number: 188586579

Start: 2072457

End: 2074127

Strand: Reverse

Name: 188586579

Synonym: Nther_1966

Alternate gene names: NA

Gene position: 2074127-2072457 (Counterclockwise)

Preceding gene: 188586580

Following gene: 188586578

Centisome position: 65.52

GC content: 36.15

Gene sequence:

>1671_bases
ATGGAACAATCGAATGCTAAAAAAATTACACTGATAGATGGATATGTGGATGAACCTTCTTGTTTGGGGGTACCGCCTTA
TATTTCTCCTTATGTCAGATATACTTTTGGTGCTCTCCTGGAATCCGGTTTCAGAGAAGGACAAATTGAATACTTAACCA
TTGATCAATTAAGAGATGATACAGAAAAATTGGAAGAACTACAAACAAATCGGGAATCGATTGTAATAATAGCAGGAACC
ACAGTGCCTGGGAGATATTTGGGAGGTCGTCCCATTTCACTTAAAGAAATCTCCCGAGTTTCTGAAAATTGTAGAGGCAA
AATATATCTAGGAGGCCCTATAGTTTTATGTGGCTTTGAGATTCCAGGACTCGATTACTACTTAGATGAAACAGGAGCTT
TTACTTTATACGAATTGATGAGTTGTTCAAGTTTTGATAAATCACTAAAATCAACGAAATCACTGATCCATAATCGCTCA
GGCAGATTGGAACTTTTGGAACGATTCGCTCAAAGTGGAGCACAAGTCCTTACAAAACATCCTGAATTTCCCTTTGTAGT
TTGTGAACTAGAAACTTATAGAGGGTGTTTACGCCAGGGTAATTGTAATTTTTGCAGTGAATCTTTAAAGAAAATCCTTT
ATACAAGAACCCCACAGGACATATCTAAGGAAGTTTCAGCTTTATACAGTCATGGTGCAAGACATTTTAGATTGGGTGCA
CAAACAGATCTATTTATGTACGGTGCTACTGAGACTGATTTAGGTCTAACCCCAAATCCGGCTGTAATTCAAGAATTATA
TAGTGGAATCAGAAAAGCAGCTCCTCAGCTGGAAACTTTGCATATGGATAATGCCAATCCTTCTACCATTGCCAGGTATC
CCCAGGCAGCCCGAGAAATTATGAAAACCATAGTTACATATAATACTCCTGGAGATACAGCAGCTTTTGGTTTAGAATCC
TGTGACCCGGAAGTTTTGAAGCAAAATGATATTGGGACCGATCCTCAAGAAACTATGGCTGCTATTGAACTAATGAACCA
GGTTGGAGGAATAACAGAAAATGGTGTTTATAAGCTCCTACCTGGAATTAATCTTTTATACGGTTTACAAGGTGAGACTT
CAGATACATTTGACTTAAATTTTAATTTTTTGAAAGAAGTACTCGACAGAGGTTTATTATTGCGGCGGATTAATCTAAGA
CAGGTTCGAGAAATTGCAGGATATGCAGCTAAAAAAGTGAATGAAAAGAGATTTAAACAACATAAAGAAATGGTTAATCA
GGAGATAAACTTCCCCATGCTTAAAAAAGTGTTTCCTAAAAAAAGTATTCTAAAAAATGTAAGAACAGAAAAACGGGAAG
GATACGTAACTTATGGGCGACAATTAGGTAGTTATCCAATCTTAGTGGGAATTCCAGGAGAACATCCTCTAGATAAATTT
GTAGATGTAAAAGTTATAGATCATGGGTATCGGTCAATAACTGGATTGAAGTATCCATTTAATATTAATAAAGCTCAAAA
AGAGGAGTTAAGGGCATTACCTGGTATCGGTAAAAAGAGAGCAACACATTTGTTTTTAAATAAACCTATTGAGAACGGGA
ATGAATTACAGAATTTACTTGGAGATTCTATAAATGTAGAAGAAATTGATAGTTTGATAGATCAATACTAG

Upstream 100 bases:

>100_bases
AGTATATTCCTTATTTAAGTATGTCTGAGTTAACTCCCGAACAGTCCACAATGACAACTAACAGGCAAAATCAAAAATAT
GAAGTAGGGAGAGAAATGAT

Downstream 100 bases:

>100_bases
TTTTCAAAAAATTTTGTTGTTTAGTCATTGACAGCTCTAATATTCTCTGATAATTTATCCTTGCCAATATCGTATTGCCG
GGAAAGGAGGAGAAAACGTG

Product: Radical SAM domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 556; Mature: 556

Protein sequence:

>556_residues
MEQSNAKKITLIDGYVDEPSCLGVPPYISPYVRYTFGALLESGFREGQIEYLTIDQLRDDTEKLEELQTNRESIVIIAGT
TVPGRYLGGRPISLKEISRVSENCRGKIYLGGPIVLCGFEIPGLDYYLDETGAFTLYELMSCSSFDKSLKSTKSLIHNRS
GRLELLERFAQSGAQVLTKHPEFPFVVCELETYRGCLRQGNCNFCSESLKKILYTRTPQDISKEVSALYSHGARHFRLGA
QTDLFMYGATETDLGLTPNPAVIQELYSGIRKAAPQLETLHMDNANPSTIARYPQAAREIMKTIVTYNTPGDTAAFGLES
CDPEVLKQNDIGTDPQETMAAIELMNQVGGITENGVYKLLPGINLLYGLQGETSDTFDLNFNFLKEVLDRGLLLRRINLR
QVREIAGYAAKKVNEKRFKQHKEMVNQEINFPMLKKVFPKKSILKNVRTEKREGYVTYGRQLGSYPILVGIPGEHPLDKF
VDVKVIDHGYRSITGLKYPFNINKAQKEELRALPGIGKKRATHLFLNKPIENGNELQNLLGDSINVEEIDSLIDQY

Sequences:

>Translated_556_residues
MEQSNAKKITLIDGYVDEPSCLGVPPYISPYVRYTFGALLESGFREGQIEYLTIDQLRDDTEKLEELQTNRESIVIIAGT
TVPGRYLGGRPISLKEISRVSENCRGKIYLGGPIVLCGFEIPGLDYYLDETGAFTLYELMSCSSFDKSLKSTKSLIHNRS
GRLELLERFAQSGAQVLTKHPEFPFVVCELETYRGCLRQGNCNFCSESLKKILYTRTPQDISKEVSALYSHGARHFRLGA
QTDLFMYGATETDLGLTPNPAVIQELYSGIRKAAPQLETLHMDNANPSTIARYPQAAREIMKTIVTYNTPGDTAAFGLES
CDPEVLKQNDIGTDPQETMAAIELMNQVGGITENGVYKLLPGINLLYGLQGETSDTFDLNFNFLKEVLDRGLLLRRINLR
QVREIAGYAAKKVNEKRFKQHKEMVNQEINFPMLKKVFPKKSILKNVRTEKREGYVTYGRQLGSYPILVGIPGEHPLDKF
VDVKVIDHGYRSITGLKYPFNINKAQKEELRALPGIGKKRATHLFLNKPIENGNELQNLLGDSINVEEIDSLIDQY
>Mature_556_residues
MEQSNAKKITLIDGYVDEPSCLGVPPYISPYVRYTFGALLESGFREGQIEYLTIDQLRDDTEKLEELQTNRESIVIIAGT
TVPGRYLGGRPISLKEISRVSENCRGKIYLGGPIVLCGFEIPGLDYYLDETGAFTLYELMSCSSFDKSLKSTKSLIHNRS
GRLELLERFAQSGAQVLTKHPEFPFVVCELETYRGCLRQGNCNFCSESLKKILYTRTPQDISKEVSALYSHGARHFRLGA
QTDLFMYGATETDLGLTPNPAVIQELYSGIRKAAPQLETLHMDNANPSTIARYPQAAREIMKTIVTYNTPGDTAAFGLES
CDPEVLKQNDIGTDPQETMAAIELMNQVGGITENGVYKLLPGINLLYGLQGETSDTFDLNFNFLKEVLDRGLLLRRINLR
QVREIAGYAAKKVNEKRFKQHKEMVNQEINFPMLKKVFPKKSILKNVRTEKREGYVTYGRQLGSYPILVGIPGEHPLDKF
VDVKVIDHGYRSITGLKYPFNINKAQKEELRALPGIGKKRATHLFLNKPIENGNELQNLLGDSINVEEIDSLIDQY

Specific function: Unknown

COG id: COG1031

COG function: function code C; Uncharacterized Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 62510; Mature: 62510

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQSNAKKITLIDGYVDEPSCLGVPPYISPYVRYTFGALLESGFREGQIEYLTIDQLRDD
CCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHCCH
TEKLEELQTNRESIVIIAGTTVPGRYLGGRPISLKEISRVSENCRGKIYLGGPIVLCGFE
HHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCEEEEEEEC
IPGLDYYLDETGAFTLYELMSCSSFDKSLKSTKSLIHNRSGRLELLERFAQSGAQVLTKH
CCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHCC
PEFPFVVCELETYRGCLRQGNCNFCSESLKKILYTRTPQDISKEVSALYSHGARHFRLGA
CCCCEEEEEEHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEECCC
QTDLFMYGATETDLGLTPNPAVIQELYSGIRKAAPQLETLHMDNANPSTIARYPQAAREI
CCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHH
MKTIVTYNTPGDTAAFGLESCDPEVLKQNDIGTDPQETMAAIELMNQVGGITENGVYKLL
HHHHHHCCCCCCHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEECC
PGINLLYGLQGETSDTFDLNFNFLKEVLDRGLLLRRINLRQVREIAGYAAKKVNEKRFKQ
CCCEEEEECCCCCCCEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HKEMVNQEINFPMLKKVFPKKSILKNVRTEKREGYVTYGRQLGSYPILVGIPGEHPLDKF
HHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEECCCCCCHHHH
VDVKVIDHGYRSITGLKYPFNINKAQKEELRALPGIGKKRATHLFLNKPIENGNELQNLL
CEEEEECCCCHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHEEEEECCCCCHHHHHHHH
GDSINVEEIDSLIDQY
CCCCCHHHHHHHHHCC
>Mature Secondary Structure
MEQSNAKKITLIDGYVDEPSCLGVPPYISPYVRYTFGALLESGFREGQIEYLTIDQLRDD
CCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHCCH
TEKLEELQTNRESIVIIAGTTVPGRYLGGRPISLKEISRVSENCRGKIYLGGPIVLCGFE
HHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCEEEEEEEC
IPGLDYYLDETGAFTLYELMSCSSFDKSLKSTKSLIHNRSGRLELLERFAQSGAQVLTKH
CCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHCC
PEFPFVVCELETYRGCLRQGNCNFCSESLKKILYTRTPQDISKEVSALYSHGARHFRLGA
CCCCEEEEEEHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEECCC
QTDLFMYGATETDLGLTPNPAVIQELYSGIRKAAPQLETLHMDNANPSTIARYPQAAREI
CCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHH
MKTIVTYNTPGDTAAFGLESCDPEVLKQNDIGTDPQETMAAIELMNQVGGITENGVYKLL
HHHHHHCCCCCCHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEECC
PGINLLYGLQGETSDTFDLNFNFLKEVLDRGLLLRRINLRQVREIAGYAAKKVNEKRFKQ
CCCEEEEECCCCCCCEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HKEMVNQEINFPMLKKVFPKKSILKNVRTEKREGYVTYGRQLGSYPILVGIPGEHPLDKF
HHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEECCCCCCHHHH
VDVKVIDHGYRSITGLKYPFNINKAQKEELRALPGIGKKRATHLFLNKPIENGNELQNLL
CEEEEECCCCHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHEEEEECCCCCHHHHHHHH
GDSINVEEIDSLIDQY
CCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]