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The map label for this gene is 188586262

Identifier: 188586262

GI number: 188586262

Start: 1725028

End: 1725498

Strand: Reverse

Name: 188586262

Synonym: Nther_1645

Alternate gene names: NA

Gene position: 1725498-1725028 (Counterclockwise)

Preceding gene: 188586263

Following gene: 188586261

Centisome position: 54.51

GC content: 37.79

Gene sequence:

>471_bases
TTGAATAAACCAAATCCAGAAAAAAAGTTACAAGAACTGGGGATTGAACTACCAGAACCACCAAAGCCTGTAGCTTCATA
CGTACCATCAGTCAAATCAGGAAATATGGTGTTTGTGTCCGGACAAATACCTTTAGTACAAGGTAACTTGCAGTATGAAG
GAAAAGTTGGAGGAGAGGTTAGTTTAGAGGATGCTTATGAAGCTGCTAAACTTTGCACCATTAATTGTTTAAGTGTAGTA
AAAGGTGAAATCGGAGATTTATCAAAAATCAAGAAAATAGTTAAGGTCACCGGATATGTAAGTAGCGAATCTGGATTTAA
TAAACAGCCTCAGGTAATAAACGGCTCAAGTGACTTTTTAGGTGAAGTTTTTGGCGAAGTAGGGGAACATTCAAGAGCTG
CCGTGGGTGTTAGTGAATTGCCGTTAAATAGCCCAGTTGAAGTTGATATGATAGTAGAAATCGAAGAATAA

Upstream 100 bases:

>100_bases
GTGTTTATTTGCCTTGCAGTTTTTACTTAAATATATTTGAGAAAATCCAACCAAATTGATAAAATTAACTATGCAAAAAA
TAATAAAGGAGGTCTACATA

Downstream 100 bases:

>100_bases
AGAATGACTCACAATTAATACAAAGGCCATCAAAGCTTATTTTTAAGGCTTTGGTGGCCTTATTATTTATGGCTAAATTT
AGACTTTCAAGAATCCTTTA

Product: Endoribonuclease L-PSP

Products: NA

Alternate protein names: Translation Initiation Inhibitor; Endoribonuclease L-PSP Family Protein; Translation Initiation Inhibitor YjgF Family; Translation Initiation Inhibitor Protein; Endoribonuclease L-Psp; Endoribonuclease; Endoribonuclease L-PSP Superfamily; Transcription Regulator; YjgF Family Translation Initiation Inhibitor; Transcriptional Regulator; Endoribonuclease Family Protein; Endoribonuclease L-PSP Family; L-PSP Family Endoribonuclease; 2-Aminomuconate Deaminase; Endoribonuclease-L-PSP Family Protein; Creatininase; Translation Initiation Inhibitor YjgF

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MNKPNPEKKLQELGIELPEPPKPVASYVPSVKSGNMVFVSGQIPLVQGNLQYEGKVGGEVSLEDAYEAAKLCTINCLSVV
KGEIGDLSKIKKIVKVTGYVSSESGFNKQPQVINGSSDFLGEVFGEVGEHSRAAVGVSELPLNSPVEVDMIVEIEE

Sequences:

>Translated_156_residues
MNKPNPEKKLQELGIELPEPPKPVASYVPSVKSGNMVFVSGQIPLVQGNLQYEGKVGGEVSLEDAYEAAKLCTINCLSVV
KGEIGDLSKIKKIVKVTGYVSSESGFNKQPQVINGSSDFLGEVFGEVGEHSRAAVGVSELPLNSPVEVDMIVEIEE
>Mature_156_residues
MNKPNPEKKLQELGIELPEPPKPVASYVPSVKSGNMVFVSGQIPLVQGNLQYEGKVGGEVSLEDAYEAAKLCTINCLSVV
KGEIGDLSKIKKIVKVTGYVSSESGFNKQPQVINGSSDFLGEVFGEVGEHSRAAVGVSELPLNSPVEVDMIVEIEE

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16659; Mature: 16659

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKPNPEKKLQELGIELPEPPKPVASYVPSVKSGNMVFVSGQIPLVQGNLQYEGKVGGEV
CCCCCHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCEEEEECCCEEEECCEEECCCCCCEE
SLEDAYEAAKLCTINCLSVVKGEIGDLSKIKKIVKVTGYVSSESGFNKQPQVINGSSDFL
EHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEECCCHHHH
GEVFGEVGEHSRAAVGVSELPLNSPVEVDMIVEIEE
HHHHHHHCCCCCCCCCHHHCCCCCCCCEEEEEEECC
>Mature Secondary Structure
MNKPNPEKKLQELGIELPEPPKPVASYVPSVKSGNMVFVSGQIPLVQGNLQYEGKVGGEV
CCCCCHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCEEEEECCCEEEECCEEECCCCCCEE
SLEDAYEAAKLCTINCLSVVKGEIGDLSKIKKIVKVTGYVSSESGFNKQPQVINGSSDFL
EHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEECCCHHHH
GEVFGEVGEHSRAAVGVSELPLNSPVEVDMIVEIEE
HHHHHHHCCCCCCCCCHHHCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA