Definition Natranaerobius thermophilus JW/NM-WN-LF, complete genome.
Accession NC_010718
Length 3,165,557

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The map label for this gene is 188585796

Identifier: 188585796

GI number: 188585796

Start: 1238076

End: 1240313

Strand: Direct

Name: 188585796

Synonym: Nther_1170

Alternate gene names: NA

Gene position: 1238076-1240313 (Clockwise)

Preceding gene: 188585795

Following gene: 188585797

Centisome position: 39.11

GC content: 41.6

Gene sequence:

>2238_bases
ATGGCAGATAATAACAATCAAAACCAAAAGAAGCAAGAAAACTTATCTACTGATGAAAAACTCTTAATTGAAGATATTTT
ACATGATCTTGATAAGTATCGCCCTAAAAGAAAAGGTTGGGCCTGGAGAGAAGAGCAAGGCCCTAGGCAAGTGGGACCCT
TTAATTATAAAGAAGTATCCAAATCACTTAAAAATAGTGTACCTCTACCAGCAGCTAGAAGTTTTCAAGAGATTGATCCT
CAACCGGATTGTGTCATAACATCTGAAATTGCTTCTGGTAGATTTGAAGATGATATTCGTCGGATGAGAATGGCTGCCTG
GCATGGTGCAGATCATATGATGGTGATTAGGACAGCCGGTCAGAGTCACTTCGATGGTTTGATTGAGGGAACACCTGAAG
GAGTGGGTGGTATCCCTATCTCAAGAAAACAATTGAGAGCTACTCGCAAAGGGCTGGATTTGATTGAAGAGGAAGTGGGG
CGTCCCCTCAATCTTCACTCATATGTTAGTGGAGTATCTGGACCAGAAATAGCTCTGCTATTTGCAGAAGAAGGTGTAAA
CGGTGCTCATCAGGACCCCCAATACAATGTTCTTTACAGAAATGTTAATATGGTTCGTTCCTTTGTCGATGCGGCAGTTG
CTAAAAACTTGATGAAATCAGTGGATATGCTACAGATAGACGGTGCTCACAATGCCAACGCTACAGCCCGAGAAGCATGG
AAAGTTATGCCTGAACTAATGGTACAACATGCTATTAACACAGCATATTCCAGGCGAATCGGAATGCCTGATGAATTGAT
TTCACTAAGTAGTGTGCCGCCTACTGCACCGCCAGCACCTGCGTTAACTTACGATTTACCCTATGCGGTAGCTTTGAGAG
AGTTGTTCCCTAAGAATAATATTAGGGCTCAAATGAACACTAAATATATTGAATCAGACACTAGAGAAGCAACAGTCACT
CATGTTCTGAACCTGCTTATCAGTCGATTGACTAGGGCAGAAATTCAGAGTACTATTACGCCAGATGAAGGTAGGAATGT
GCCATGGCATCATTTCAGTGTGCAAGCTGTTGACACTGCAAAACAAGCCCTGTTGGGAATGGATGGCTTAAAAGACTTGG
TAGAAATTAAGCGCGATGGCATTGTAGGAGAAAGAGTACGTGAACTAAAAGAACGAGCTGTACTCTTCTTTGAAGAAATT
CTGGAAACGGGTGGTTATTTCAAAGCTGTTGAAGAAGGCTATTTTGTTGACTCCGGTTTTTATCCTGAACGCAATGGTGA
CGGTATTCAAAGAGATATCGACGGCGGAGTGGGTGCCAATACCATAGTAAAGAGAGACGAAGACTACATGGCACCTGTCT
GTGAGCACTTTGGATACAATAACCTTCCTCAAGAATGGGATTCACCATGTGAGCCAGTTGATGGATGTACCCTATGTGAC
CATGATAAAATTGCTTATATTGATGAATTAGATGATGAAGACAACGTAGAAAAGAGATTAGAGAAAACTGAAGATTACCG
TAAAGCTGAGAAAAAACTGATACCAGAAGTTGAATGGGCAGCAGATAGAATTGCATGCCTAACAATGTTCCTACCTGTTT
CTGAGAGAGTTGCAGAATACGCAGCACTAGAAATGGTAGGTAAAATGGGTTGGGAAGATGCAGAAGTGATCCACAAATAC
AGTATGCAGCCGGCTGAAGGAACTTATGTTGAAGTCAAAGGTCGTGTACCTCATGAAATCAATCCATCTGAACTAGATAT
ACCTGAACCGGAAGAACTGCTTCCTGAAGACGAGATTCGGGATTATGTATCAGAAAACGGCATGAAAGTAGTAGCTGCTA
CAGTAGGAGAAGATGAGCACTCCGTTGGTATGAGAGAAATCATTGATATCAAACACGGTGGAATCGAAGCTTTCGGTATC
AAGACAGACTATCTGGGTACCTCAGTACCTGTAGAAAAAGTAGTTGATGCTGCAGTAGAGATTGATGCTGATGCCATCTT
GATCAGTACAATTATTACACATGGTGATGTTCATAGAGAAAATATGAAAAAGTTACATCAGCTTTGTGTGGAAAAAGGAA
TGCGAGATAAGGTGATCTTGATAGGTGGAGGAACCCAGGTGAATGATGACATTGCAAAAGAATCCGGACTTGATGCTGGA
TTTGGAAGAGGTACAAAAGGAATTAATGTGGCAAGCTATCTTGTAAAACAAATGAAAGAAGATGCTGACTCCAATTAG

Upstream 100 bases:

>100_bases
TAGCCCGTGATCAAGGAATTGAAATTAAAGAAGCGGGAAGAGCCCTGGCTGATGGTAAACACTGGGATAGAGCAGTAGAG
CTGTTTGGAGGTGGTAAGTA

Downstream 100 bases:

>100_bases
TGGCTCTAATTAAGGAGGTATTGCGATGGGACAGGAAAAACTAGTAGCAGAAGTCGGCAGTACTACTACAGTTGTTTCAA
TGTATAATGAGAAGGGAAAG

Product: D-Lysine 56-aminomutase alpha subunit

Products: NA

Alternate protein names: D-Lysine; D-Lysine 5 6-Aminomutase Alpha Subunit; D-Ornithine Aminomutase E Component; L-Beta-Lysine 5 6-Aminomutase Alpha Subunit; L-Beta-Lysine 5 6-Aminomutase Beta Subunit; D-Lysine 56-Aminomutase Beta Subunit; D-Lysine 56-Aminomutase Alpha Subunit; D-Ornithine 4 5-Aminomutase E Subunit; Beta-Lysine 56-Aminomutase Alpha Subunit; D-Lysine 5 6-Aminomutase Subunit Beta; D-Lysine 5 6-Aminomutase Beta Subunit; Beta-Lysine 5 6-Aminomutase Beta Subunit; Beta-Lysine 56-Aminomutase Beta Subunit; Lysine 5 6-Aminomutase Alpha Subunit; Lysine 5 6-Aminomutase Beta Subunit; Methylmalonyl-CoA Mutase C- Domain/Subunit

Number of amino acids: Translated: 745; Mature: 744

Protein sequence:

>745_residues
MADNNNQNQKKQENLSTDEKLLIEDILHDLDKYRPKRKGWAWREEQGPRQVGPFNYKEVSKSLKNSVPLPAARSFQEIDP
QPDCVITSEIASGRFEDDIRRMRMAAWHGADHMMVIRTAGQSHFDGLIEGTPEGVGGIPISRKQLRATRKGLDLIEEEVG
RPLNLHSYVSGVSGPEIALLFAEEGVNGAHQDPQYNVLYRNVNMVRSFVDAAVAKNLMKSVDMLQIDGAHNANATAREAW
KVMPELMVQHAINTAYSRRIGMPDELISLSSVPPTAPPAPALTYDLPYAVALRELFPKNNIRAQMNTKYIESDTREATVT
HVLNLLISRLTRAEIQSTITPDEGRNVPWHHFSVQAVDTAKQALLGMDGLKDLVEIKRDGIVGERVRELKERAVLFFEEI
LETGGYFKAVEEGYFVDSGFYPERNGDGIQRDIDGGVGANTIVKRDEDYMAPVCEHFGYNNLPQEWDSPCEPVDGCTLCD
HDKIAYIDELDDEDNVEKRLEKTEDYRKAEKKLIPEVEWAADRIACLTMFLPVSERVAEYAALEMVGKMGWEDAEVIHKY
SMQPAEGTYVEVKGRVPHEINPSELDIPEPEELLPEDEIRDYVSENGMKVVAATVGEDEHSVGMREIIDIKHGGIEAFGI
KTDYLGTSVPVEKVVDAAVEIDADAILISTIITHGDVHRENMKKLHQLCVEKGMRDKVILIGGGTQVNDDIAKESGLDAG
FGRGTKGINVASYLVKQMKEDADSN

Sequences:

>Translated_745_residues
MADNNNQNQKKQENLSTDEKLLIEDILHDLDKYRPKRKGWAWREEQGPRQVGPFNYKEVSKSLKNSVPLPAARSFQEIDP
QPDCVITSEIASGRFEDDIRRMRMAAWHGADHMMVIRTAGQSHFDGLIEGTPEGVGGIPISRKQLRATRKGLDLIEEEVG
RPLNLHSYVSGVSGPEIALLFAEEGVNGAHQDPQYNVLYRNVNMVRSFVDAAVAKNLMKSVDMLQIDGAHNANATAREAW
KVMPELMVQHAINTAYSRRIGMPDELISLSSVPPTAPPAPALTYDLPYAVALRELFPKNNIRAQMNTKYIESDTREATVT
HVLNLLISRLTRAEIQSTITPDEGRNVPWHHFSVQAVDTAKQALLGMDGLKDLVEIKRDGIVGERVRELKERAVLFFEEI
LETGGYFKAVEEGYFVDSGFYPERNGDGIQRDIDGGVGANTIVKRDEDYMAPVCEHFGYNNLPQEWDSPCEPVDGCTLCD
HDKIAYIDELDDEDNVEKRLEKTEDYRKAEKKLIPEVEWAADRIACLTMFLPVSERVAEYAALEMVGKMGWEDAEVIHKY
SMQPAEGTYVEVKGRVPHEINPSELDIPEPEELLPEDEIRDYVSENGMKVVAATVGEDEHSVGMREIIDIKHGGIEAFGI
KTDYLGTSVPVEKVVDAAVEIDADAILISTIITHGDVHRENMKKLHQLCVEKGMRDKVILIGGGTQVNDDIAKESGLDAG
FGRGTKGINVASYLVKQMKEDADSN
>Mature_744_residues
ADNNNQNQKKQENLSTDEKLLIEDILHDLDKYRPKRKGWAWREEQGPRQVGPFNYKEVSKSLKNSVPLPAARSFQEIDPQ
PDCVITSEIASGRFEDDIRRMRMAAWHGADHMMVIRTAGQSHFDGLIEGTPEGVGGIPISRKQLRATRKGLDLIEEEVGR
PLNLHSYVSGVSGPEIALLFAEEGVNGAHQDPQYNVLYRNVNMVRSFVDAAVAKNLMKSVDMLQIDGAHNANATAREAWK
VMPELMVQHAINTAYSRRIGMPDELISLSSVPPTAPPAPALTYDLPYAVALRELFPKNNIRAQMNTKYIESDTREATVTH
VLNLLISRLTRAEIQSTITPDEGRNVPWHHFSVQAVDTAKQALLGMDGLKDLVEIKRDGIVGERVRELKERAVLFFEEIL
ETGGYFKAVEEGYFVDSGFYPERNGDGIQRDIDGGVGANTIVKRDEDYMAPVCEHFGYNNLPQEWDSPCEPVDGCTLCDH
DKIAYIDELDDEDNVEKRLEKTEDYRKAEKKLIPEVEWAADRIACLTMFLPVSERVAEYAALEMVGKMGWEDAEVIHKYS
MQPAEGTYVEVKGRVPHEINPSELDIPEPEELLPEDEIRDYVSENGMKVVAATVGEDEHSVGMREIIDIKHGGIEAFGIK
TDYLGTSVPVEKVVDAAVEIDADAILISTIITHGDVHRENMKKLHQLCVEKGMRDKVILIGGGTQVNDDIAKESGLDAGF
GRGTKGINVASYLVKQMKEDADSN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 83188; Mature: 83057

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADNNNQNQKKQENLSTDEKLLIEDILHDLDKYRPKRKGWAWREEQGPRQVGPFNYKEVS
CCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCHHHHH
KSLKNSVPLPAARSFQEIDPQPDCVITSEIASGRFEDDIRRMRMAAWHGADHMMVIRTAG
HHHHHCCCCCCHHHHHHCCCCCCEEEEHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEECC
QSHFDGLIEGTPEGVGGIPISRKQLRATRKGLDLIEEEVGRPLNLHSYVSGVSGPEIALL
CHHHCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCEEEE
FAEEGVNGAHQDPQYNVLYRNVNMVRSFVDAAVAKNLMKSVDMLQIDGAHNANATAREAW
EECCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHH
KVMPELMVQHAINTAYSRRIGMPDELISLSSVPPTAPPAPALTYDLPYAVALRELFPKNN
HHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCEEECCHHHHHHHHHCCCCC
IRAQMNTKYIESDTREATVTHVLNLLISRLTRAEIQSTITPDEGRNVPWHHFSVQAVDTA
CCEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHH
KQALLGMDGLKDLVEIKRDGIVGERVRELKERAVLFFEEILETGGYFKAVEEGYFVDSGF
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHCCEEECCCC
YPERNGDGIQRDIDGGVGANTIVKRDEDYMAPVCEHFGYNNLPQEWDSPCEPVDGCTLCD
CCCCCCCCCCHHCCCCCCCCHHEECCCHHHHHHHHHCCCCCCCHHHCCCCCCCCCCEECC
HDKIAYIDELDDEDNVEKRLEKTEDYRKAEKKLIPEVEWAADRIACLTMFLPVSERVAEY
CCCEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
AALEMVGKMGWEDAEVIHKYSMQPAEGTYVEVKGRVPHEINPSELDIPEPEELLPEDEIR
HHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHCCHHHHH
DYVSENGMKVVAATVGEDEHSVGMREIIDIKHGGIEAFGIKTDYLGTSVPVEKVVDAAVE
HHHHCCCCEEEEEECCCCHHHCCHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHH
IDADAILISTIITHGDVHRENMKKLHQLCVEKGMRDKVILIGGGTQVNDDIAKESGLDAG
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHCCCCCC
FGRGTKGINVASYLVKQMKEDADSN
CCCCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ADNNNQNQKKQENLSTDEKLLIEDILHDLDKYRPKRKGWAWREEQGPRQVGPFNYKEVS
CCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCHHHHH
KSLKNSVPLPAARSFQEIDPQPDCVITSEIASGRFEDDIRRMRMAAWHGADHMMVIRTAG
HHHHHCCCCCCHHHHHHCCCCCCEEEEHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEECC
QSHFDGLIEGTPEGVGGIPISRKQLRATRKGLDLIEEEVGRPLNLHSYVSGVSGPEIALL
CHHHCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCEEEE
FAEEGVNGAHQDPQYNVLYRNVNMVRSFVDAAVAKNLMKSVDMLQIDGAHNANATAREAW
EECCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHH
KVMPELMVQHAINTAYSRRIGMPDELISLSSVPPTAPPAPALTYDLPYAVALRELFPKNN
HHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCEEECCHHHHHHHHHCCCCC
IRAQMNTKYIESDTREATVTHVLNLLISRLTRAEIQSTITPDEGRNVPWHHFSVQAVDTA
CCEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHH
KQALLGMDGLKDLVEIKRDGIVGERVRELKERAVLFFEEILETGGYFKAVEEGYFVDSGF
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHCCEEECCCC
YPERNGDGIQRDIDGGVGANTIVKRDEDYMAPVCEHFGYNNLPQEWDSPCEPVDGCTLCD
CCCCCCCCCCHHCCCCCCCCHHEECCCHHHHHHHHHCCCCCCCHHHCCCCCCCCCCEECC
HDKIAYIDELDDEDNVEKRLEKTEDYRKAEKKLIPEVEWAADRIACLTMFLPVSERVAEY
CCCEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
AALEMVGKMGWEDAEVIHKYSMQPAEGTYVEVKGRVPHEINPSELDIPEPEELLPEDEIR
HHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHCCHHHHH
DYVSENGMKVVAATVGEDEHSVGMREIIDIKHGGIEAFGIKTDYLGTSVPVEKVVDAAVE
HHHHCCCCEEEEEECCCCHHHCCHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHH
IDADAILISTIITHGDVHRENMKKLHQLCVEKGMRDKVILIGGGTQVNDDIAKESGLDAG
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHCCCCCC
FGRGTKGINVASYLVKQMKEDADSN
CCCCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA