Click here to switch to the map view.

The map label for this gene is pqqE [H]

Identifier: 188585752

GI number: 188585752

Start: 1193743

End: 1194924

Strand: Direct

Name: pqqE [H]

Synonym: Nther_1126

Alternate gene names: 188585752

Gene position: 1193743-1194924 (Clockwise)

Preceding gene: 188585751

Following gene: 188585753

Centisome position: 37.71

GC content: 36.46

Gene sequence:

>1182_bases
ATGATTAGTGTAACTAAATTATTAATGCAGGACAGTGATCATTATGGAGATGGTCTTAGATATCACAAGGATTCAGGAAA
AACAGTTCATGGAACTCGTAAAGGCCATGGACCAGTAGTAGTTTGGAATTGTACTAGAACGTGCAATTTAAATTGTATTC
ACTGTTATTCCGATTCCGATAGTAATTCTTATTCTGGAGAATTGTCTACTAAAGAAGCTAAGACTTTTATAGATGATTTA
CAAGCTTTCAATGTACCTGTATTGTTATTTTCAGGTGGAGAACCTTTGTTGAGAAATGATTTCTTTGAACTGGCAGAATA
TGCTGCCCAAAAAGGTATAAGATCGACTATTTCTACCAATGGAACTTTGATCGATAAACAGATGGCAAAGGATTTTAAAA
AAATTGGGATCAGTTATGTAGGTATCAGCCTTGATGGAATTGGAGAGAATAATGACAATTTTAGAGGACAAAGTGGAGCT
TTTCAAGATGCTCTGGCAGGAATACGAAACTGTCTTGAAGAAGGTCAAAAAGTGGGGCTAAGGTTTACTATAAACCGTCA
TAATTATAAAGAGTTACCTGATATTTTTAAATTAATAAAAGAAGAAAATATTCCGCGGGTATGCTTTTATCACCTGGTTT
ATTCTGGCCGGGGAAGTGAAATGAAAGATCAGGACATTTCACCTGAAGAAACAAGAGAAGTACTTGACTTGATCATGGAA
AAAACTCTCGAGTTTGCCAGGATTAATGATCCCAAGGAGATCTTAATGGTAGCAAATCATGCCGATGGTATCTATATTTA
TCAAAAAATGCTTCAAGAAGATCCAGCTAAAGCCCAGGAAATATTGAAACTTTTAGGAAAAAATGGGGGAAATCGTAGTG
GCATAGCTATTAGCAGTGTAGATAGTCAGGGATGGGTCCATCCAGATCAATTTACTCAAAATCATACTTTTGGTAATGTC
AAGGAACGCCCCTTTGGTGAAATTTGGACTGATACTGATTCGAATGAAATATTACGGGGATTAAAAGATAGGAAACCTTT
ATTAAAAGGGCGCTGTAGTCAATGTCGTTGGCTTGACTATTGCAACGGTAATTTCAGGGCTAGGGCTGAGTCTGTTTATC
ACGATTTTTGGGCTTCTGATCCAGCTTGCTATTTGACTGATAAAGAGATCGGTTTAAAATAA

Upstream 100 bases:

>100_bases
ATGGTATAGAAGTTAATTCAATTGCCAATGAATATACAATTCCAGGTCTGGTAGAATCCTTGATAGATAATCTGGATGAG
AACGTGGAGGAGGAGTTTAA

Downstream 100 bases:

>100_bases
TTTTTTATACAACGTGATATAACAACTTTTGAAGGGAAAAGTTTTAATAAATAGCTACTAGGGGGTGGCAGTAATGAAAT
ATCCTGAGTATCGAATGAGG

Product: Radical SAM domain protein

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein E [H]

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MISVTKLLMQDSDHYGDGLRYHKDSGKTVHGTRKGHGPVVVWNCTRTCNLNCIHCYSDSDSNSYSGELSTKEAKTFIDDL
QAFNVPVLLFSGGEPLLRNDFFELAEYAAQKGIRSTISTNGTLIDKQMAKDFKKIGISYVGISLDGIGENNDNFRGQSGA
FQDALAGIRNCLEEGQKVGLRFTINRHNYKELPDIFKLIKEENIPRVCFYHLVYSGRGSEMKDQDISPEETREVLDLIME
KTLEFARINDPKEILMVANHADGIYIYQKMLQEDPAKAQEILKLLGKNGGNRSGIAISSVDSQGWVHPDQFTQNHTFGNV
KERPFGEIWTDTDSNEILRGLKDRKPLLKGRCSQCRWLDYCNGNFRARAESVYHDFWASDPACYLTDKEIGLK

Sequences:

>Translated_393_residues
MISVTKLLMQDSDHYGDGLRYHKDSGKTVHGTRKGHGPVVVWNCTRTCNLNCIHCYSDSDSNSYSGELSTKEAKTFIDDL
QAFNVPVLLFSGGEPLLRNDFFELAEYAAQKGIRSTISTNGTLIDKQMAKDFKKIGISYVGISLDGIGENNDNFRGQSGA
FQDALAGIRNCLEEGQKVGLRFTINRHNYKELPDIFKLIKEENIPRVCFYHLVYSGRGSEMKDQDISPEETREVLDLIME
KTLEFARINDPKEILMVANHADGIYIYQKMLQEDPAKAQEILKLLGKNGGNRSGIAISSVDSQGWVHPDQFTQNHTFGNV
KERPFGEIWTDTDSNEILRGLKDRKPLLKGRCSQCRWLDYCNGNFRARAESVYHDFWASDPACYLTDKEIGLK
>Mature_393_residues
MISVTKLLMQDSDHYGDGLRYHKDSGKTVHGTRKGHGPVVVWNCTRTCNLNCIHCYSDSDSNSYSGELSTKEAKTFIDDL
QAFNVPVLLFSGGEPLLRNDFFELAEYAAQKGIRSTISTNGTLIDKQMAKDFKKIGISYVGISLDGIGENNDNFRGQSGA
FQDALAGIRNCLEEGQKVGLRFTINRHNYKELPDIFKLIKEENIPRVCFYHLVYSGRGSEMKDQDISPEETREVLDLIME
KTLEFARINDPKEILMVANHADGIYIYQKMLQEDPAKAQEILKLLGKNGGNRSGIAISSVDSQGWVHPDQFTQNHTFGNV
KERPFGEIWTDTDSNEILRGLKDRKPLLKGRCSQCRWLDYCNGNFRARAESVYHDFWASDPACYLTDKEIGLK

Specific function: Together With Moac, Is Involved In The Conversion Of A Guanosine Derivative (Gxp) Into Molybdopterin Precursor Z. [C]

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. PqqE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR000385
- InterPro:   IPR017200
- InterPro:   IPR011843
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 44418; Mature: 44418

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISVTKLLMQDSDHYGDGLRYHKDSGKTVHGTRKGHGPVVVWNCTRTCNLNCIHCYSDSD
CCHHHHHHHHCCCCCCCCCEEECCCCCEEECCCCCCCCEEEEECCCCCCCCEEEEECCCC
SNSYSGELSTKEAKTFIDDLQAFNVPVLLFSGGEPLLRNDFFELAEYAAQKGIRSTISTN
CCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCC
GTLIDKQMAKDFKKIGISYVGISLDGIGENNDNFRGQSGAFQDALAGIRNCLEEGQKVGL
CCEEHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCE
RFTINRHNYKELPDIFKLIKEENIPRVCFYHLVYSGRGSEMKDQDISPEETREVLDLIME
EEEECCCCCHHHHHHHHHHHHCCCCCEEEEHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
KTLEFARINDPKEILMVANHADGIYIYQKMLQEDPAKAQEILKLLGKNGGNRSGIAISSV
HHHHHHHCCCCHHEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEEEC
DSQGWVHPDQFTQNHTFGNVKERPFGEIWTDTDSNEILRGLKDRKPLLKGRCSQCRWLDY
CCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHCCCCCCCEECC
CNGNFRARAESVYHDFWASDPACYLTDKEIGLK
CCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCC
>Mature Secondary Structure
MISVTKLLMQDSDHYGDGLRYHKDSGKTVHGTRKGHGPVVVWNCTRTCNLNCIHCYSDSD
CCHHHHHHHHCCCCCCCCCEEECCCCCEEECCCCCCCCEEEEECCCCCCCCEEEEECCCC
SNSYSGELSTKEAKTFIDDLQAFNVPVLLFSGGEPLLRNDFFELAEYAAQKGIRSTISTN
CCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCC
GTLIDKQMAKDFKKIGISYVGISLDGIGENNDNFRGQSGAFQDALAGIRNCLEEGQKVGL
CCEEHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCE
RFTINRHNYKELPDIFKLIKEENIPRVCFYHLVYSGRGSEMKDQDISPEETREVLDLIME
EEEECCCCCHHHHHHHHHHHHCCCCCEEEEHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
KTLEFARINDPKEILMVANHADGIYIYQKMLQEDPAKAQEILKLLGKNGGNRSGIAISSV
HHHHHHHCCCCHHEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEEEC
DSQGWVHPDQFTQNHTFGNVKERPFGEIWTDTDSNEILRGLKDRKPLLKGRCSQCRWLDY
CCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHCCCCCCCEECC
CNGNFRARAESVYHDFWASDPACYLTDKEIGLK
CCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA