| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188585705
Identifier: 188585705
GI number: 188585705
Start: 1136474
End: 1137523
Strand: Direct
Name: 188585705
Synonym: Nther_1078
Alternate gene names: NA
Gene position: 1136474-1137523 (Clockwise)
Preceding gene: 188585704
Following gene: 188585708
Centisome position: 35.9
GC content: 35.33
Gene sequence:
>1050_bases TTGGTTGCAGGTCAAAAAAGTATTATATATGTTAGTTTGATTCTCTTAAGTTTATTTCTTGTTTTTGGGATGACGGGGTG TCAAGAGGTGCCAGATAAAGAAGATGACGAAGAAGATGCCGAAGAGGAAGTTGAAGAAGCAGAACAGGAAGAAGTTTTTG CTGAATTATTGAGAATGCATGAAACAACTTTAGCTGTTATAGAGGGAGCTGAATCCACAGTTGAAGAATCAGTTTTAGAT CAAATTGTATCAATTGAAAAAGAATTTGAGGAAGAAGAAAATGACAATGGTGAAGAAAACAATAATGAAGAAAACCAAAA CAATGAAGAAGATAATAACGATGAAGATGAAAAAGAAACAGATTCTCCAGATGAGATTTGGGATAAAGTACAAGATGATA CTGCTAATCTTCATGAAATGTGGGATGATATTGCCCCTGATATTGCCGAAGAAGACATTGCACAAGAAGAAATTGACTCC TTTGAGGAATTACTAGACGATTTAAACAGTACTGTTAATGGTGAAGAATTTTTACCTACAATAGAAAATGCCAATCAGGT TACCAGAGATATTTCGACTTTCATGATGCCTTTTAGTGAGGAAATTTATCCTGAAATTTTTGAAGCTAGATATCATACGA GAGCCATAGTTCTATTATCTTCTCAGGAAAATTTTCAAAAAGCCCAAGAAAACTTTGATTCCTTAGATGAGTTAACAGAG CTAATTGTTGAAGACCTTGAGGAAGCGGCAGAGGAAGCGCAAGAGGATGAGGATGAGGAAAATGATGAAGAAGAGAATGA AGAGGATGAAGAGGATGAAAACAATGAAAATGAGGATGAAGAAAATAATGAAGATGAAGGAAACGAACCGGGAGAAGATG TGGCCGCACAATTAGAAAAATCCGTAAAGAATTTAGGAACAGCTCTTGAAAATGATGAGCTAGAAACTGTTAATATTAAA GCGAATTTAGTTATGGAAAATCTTATGGAAGCAATTGTAGCTGCAGGCGAAGAAGCTGAAGACGAAAATGGTTTAGATAC TAGCATGTAA
Upstream 100 bases:
>100_bases CTACAACTCCCAATTAATATTTTTAGATCAACCGTAATTTCCCGAGACAACTGTAGTAAAAGCGTGATTTTTAGGTAACA ATAATTATGAGGTGATGAAA
Downstream 100 bases:
>100_bases AATATTAACACCATAGCTAAGTTATTATTTATTTAGGAGTCTGTCAAGTAATTGGTGTAAACAATCCGATTATGACCTAT AGGAACAACTTAAATACAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MVAGQKSIIYVSLILLSLFLVFGMTGCQEVPDKEDDEEDAEEEVEEAEQEEVFAELLRMHETTLAVIEGAESTVEESVLD QIVSIEKEFEEEENDNGEENNNEENQNNEEDNNDEDEKETDSPDEIWDKVQDDTANLHEMWDDIAPDIAEEDIAQEEIDS FEELLDDLNSTVNGEEFLPTIENANQVTRDISTFMMPFSEEIYPEIFEARYHTRAIVLLSSQENFQKAQENFDSLDELTE LIVEDLEEAAEEAQEDEDEENDEEENEEDEEDENNENEDEENNEDEGNEPGEDVAAQLEKSVKNLGTALENDELETVNIK ANLVMENLMEAIVAAGEEAEDENGLDTSM
Sequences:
>Translated_349_residues MVAGQKSIIYVSLILLSLFLVFGMTGCQEVPDKEDDEEDAEEEVEEAEQEEVFAELLRMHETTLAVIEGAESTVEESVLD QIVSIEKEFEEEENDNGEENNNEENQNNEEDNNDEDEKETDSPDEIWDKVQDDTANLHEMWDDIAPDIAEEDIAQEEIDS FEELLDDLNSTVNGEEFLPTIENANQVTRDISTFMMPFSEEIYPEIFEARYHTRAIVLLSSQENFQKAQENFDSLDELTE LIVEDLEEAAEEAQEDEDEENDEEENEEDEEDENNENEDEENNEDEGNEPGEDVAAQLEKSVKNLGTALENDELETVNIK ANLVMENLMEAIVAAGEEAEDENGLDTSM >Mature_349_residues MVAGQKSIIYVSLILLSLFLVFGMTGCQEVPDKEDDEEDAEEEVEEAEQEEVFAELLRMHETTLAVIEGAESTVEESVLD QIVSIEKEFEEEENDNGEENNNEENQNNEEDNNDEDEKETDSPDEIWDKVQDDTANLHEMWDDIAPDIAEEDIAQEEIDS FEELLDDLNSTVNGEEFLPTIENANQVTRDISTFMMPFSEEIYPEIFEARYHTRAIVLLSSQENFQKAQENFDSLDELTE LIVEDLEEAAEEAQEDEDEENDEEENEEDEEDENNENEDEENNEDEGNEPGEDVAAQLEKSVKNLGTALENDELETVNIK ANLVMENLMEAIVAAGEEAEDENGLDTSM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39734; Mature: 39734
Theoretical pI: Translated: 3.23; Mature: 3.23
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAGQKSIIYVSLILLSLFLVFGMTGCQEVPDKEDDEEDAEEEVEEAEQEEVFAELLRMH CCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ETTLAVIEGAESTVEESVLDQIVSIEKEFEEEENDNGEENNNEENQNNEEDNNDEDEKET HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHCC DSPDEIWDKVQDDTANLHEMWDDIAPDIAEEDIAQEEIDSFEELLDDLNSTVNGEEFLPT CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCC IENANQVTRDISTFMMPFSEEIYPEIFEARYHTRAIVLLSSQENFQKAQENFDSLDELTE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHH LIVEDLEEAAEEAQEDEDEENDEEENEEDEEDENNENEDEENNEDEGNEPGEDVAAQLEK HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH SVKNLGTALENDELETVNIKANLVMENLMEAIVAAGEEAEDENGLDTSM HHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MVAGQKSIIYVSLILLSLFLVFGMTGCQEVPDKEDDEEDAEEEVEEAEQEEVFAELLRMH CCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ETTLAVIEGAESTVEESVLDQIVSIEKEFEEEENDNGEENNNEENQNNEEDNNDEDEKET HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHCC DSPDEIWDKVQDDTANLHEMWDDIAPDIAEEDIAQEEIDSFEELLDDLNSTVNGEEFLPT CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCC IENANQVTRDISTFMMPFSEEIYPEIFEARYHTRAIVLLSSQENFQKAQENFDSLDELTE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHH LIVEDLEEAAEEAQEDEDEENDEEENEEDEEDENNENEDEENNEDEGNEPGEDVAAQLEK HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH SVKNLGTALENDELETVNIKANLVMENLMEAIVAAGEEAEDENGLDTSM HHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA