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The map label for this gene is yrdA [C]

Identifier: 188584750

GI number: 188584750

Start: 125682

End: 126188

Strand: Direct

Name: yrdA [C]

Synonym: Nther_0108

Alternate gene names: 188584750

Gene position: 125682-126188 (Clockwise)

Preceding gene: 188584749

Following gene: 188584751

Centisome position: 3.97

GC content: 37.67

Gene sequence:

>507_bases
ATGCTGCATGAATTTAAAGGGAAATATCCTGATATATCTGAAGATGTTTTTGTAGCAGATGGCACCCAAATTATTGGTGA
TGTAACTATTGCTGAAGGCGCTAGTGTTTGGTTTAATTCAGTCATCAGAGCGGATTTGGATATTGTCGAAATTGGCAGAA
AAACTAATATCCAAGACGGGTCTATTTGTCATGTAGACACAAATGAACCTTTAAAAGTTGGAGATTATGTTACAGTTGGT
CATGGAGCTATTCTACACGGATGTACAATTGCTAACAATACTTTGATAGGGATGGGTGCTACTGTTCTTAACGGTGCGAC
TGTTGGCGAAAATTGTATAATAGGTGCTGGAACGCTAATTCCCGAAGGTAAAGAAATACCTCCAAATAGTTTGGTGGTTG
GAGTGCCTGGTAAAGTCGTTAGAGAACTTTCCCAGGAAGAGGCCAATAATTTAAAAAATCACGCTGAAGAATATCATAAA
AAGGCTATGAAATATCTTGAACAATAA

Upstream 100 bases:

>100_bases
ACTGACATTGTGTTCAGCTTGCTATACCTAAATTTGCCATATATACAAAGGATAGTGTAAAATTTAAAAGAATACATTTT
TAGACAGGAGGGAGTAACGG

Downstream 100 bases:

>100_bases
GAAATACTAATTTAGATGAAGAATAAATTACTTGGACTATATCAGCTGCTGACACCTCGAAGGTTCAGCAGCTTTTTAAG
TTGCAAAAAAAATGAAATTA

Product: ferripyochelin binding protein (fbp)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MLHEFKGKYPDISEDVFVADGTQIIGDVTIAEGASVWFNSVIRADLDIVEIGRKTNIQDGSICHVDTNEPLKVGDYVTVG
HGAILHGCTIANNTLIGMGATVLNGATVGENCIIGAGTLIPEGKEIPPNSLVVGVPGKVVRELSQEEANNLKNHAEEYHK
KAMKYLEQ

Sequences:

>Translated_168_residues
MLHEFKGKYPDISEDVFVADGTQIIGDVTIAEGASVWFNSVIRADLDIVEIGRKTNIQDGSICHVDTNEPLKVGDYVTVG
HGAILHGCTIANNTLIGMGATVLNGATVGENCIIGAGTLIPEGKEIPPNSLVVGVPGKVVRELSQEEANNLKNHAEEYHK
KAMKYLEQ
>Mature_168_residues
MLHEFKGKYPDISEDVFVADGTQIIGDVTIAEGASVWFNSVIRADLDIVEIGRKTNIQDGSICHVDTNEPLKVGDYVTVG
HGAILHGCTIANNTLIGMGATVLNGATVGENCIIGAGTLIPEGKEIPPNSLVVGVPGKVVRELSQEEANNLKNHAEEYHK
KAMKYLEQ

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=176, Percent_Identity=42.6136363636364, Blast_Score=144, Evalue=3e-36,
Organism=Escherichia coli, GI1787667, Length=158, Percent_Identity=37.9746835443038, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI87081681, Length=157, Percent_Identity=31.8471337579618, Blast_Score=94, Evalue=6e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001451
- InterPro:   IPR011004 [H]

Pfam domain/function: PF00132 Hexapep [H]

EC number: NA

Molecular weight: Translated: 17980; Mature: 17980

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHEFKGKYPDISEDVFVADGTQIIGDVTIAEGASVWFNSVIRADLDIVEIGRKTNIQDG
CCCCCCCCCCCCCCCEEEECCCEEEEEEEECCCHHHHHHHHHHCCCCCEECCCCCCCCCC
SICHVDTNEPLKVGDYVTVGHGAILHGCTIANNTLIGMGATVLNGATVGENCIIGAGTLI
CEEEECCCCCEECCCEEEECCCCEEECEEECCCEEEECCHHHHCCCCCCCCEEEECCCCC
PEGKEIPPNSLVVGVPGKVVRELSQEEANNLKNHAEEYHKKAMKYLEQ
CCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLHEFKGKYPDISEDVFVADGTQIIGDVTIAEGASVWFNSVIRADLDIVEIGRKTNIQDG
CCCCCCCCCCCCCCCEEEECCCEEEEEEEECCCHHHHHHHHHHCCCCCEECCCCCCCCCC
SICHVDTNEPLKVGDYVTVGHGAILHGCTIANNTLIGMGATVLNGATVGENCIIGAGTLI
CEEEECCCCCEECCCEEEECCCCEEECEEECCCEEEECCHHHHCCCCCCCCEEEECCCCC
PEGKEIPPNSLVVGVPGKVVRELSQEEANNLKNHAEEYHKKAMKYLEQ
CCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]