Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
---|---|
Accession | NC_010718 |
Length | 3,165,557 |
Click here to switch to the map view.
The map label for this gene is 188584751
Identifier: 188584751
GI number: 188584751
Start: 126358
End: 127341
Strand: Direct
Name: 188584751
Synonym: Nther_0109
Alternate gene names: NA
Gene position: 126358-127341 (Clockwise)
Preceding gene: 188584750
Following gene: 188584752
Centisome position: 3.99
GC content: 36.38
Gene sequence:
>984_bases ATGACTACCAAAATAGGGATCCCACGGGCACTAGCTTATTTTACTTTTTTCCCTCTCTGGATTACTTTTTTTGAACAATT GAATATGGATGTTATGGTGTCTAGTGAGAGCAATAAGCAGGTTTTGGACCAAGGGGTAAAGGAAACTGTTAATGATGCTT GCATTCCTATAAAAATATATCATGGTCATGTTAAAGATTTGACAGGTAAAGTTGACTACTTATTTGTTCCTCGATTAGTG AGTTTAGATGGTGAAGAGACTGTGTGTCCTAAATTTTTAGGCTTACCTGATATGGTGAGATATTCAATTGAGGGGCTTCC TCCTCTCATTGATGAACGACTTGATTTAAGAAAGGGAAGATTTGAATTATGGAAGTTTTTTTATCGCATTGGACGTACAT TCAATAAAGGTTTTTTGGAAATATTTAAAGCTTATCAGGTAGCTTGTAGAGAGTATCAAAAATATAGAAACTTACTGACT CAAGGCTTTACACCCCAAAATGCCTGGGAGGCATTAAGAGGGGAAAAGAATTTAGACTCTAATAATAACAAAACTCAATC AGAAGACATATCAATTGCATTGCTTGGATATCCTTATACAATATATGACTCTTATATTAGTGTTGGTTTGTTTGAGCGAT TAAAGAATATGGGGGTTAATGTCTTAACAAAGGATAATGTACCGCCTCAAGAGCTGCTCAAACAAAGAAAGAATTTTTCG AAAGAGATGTTCTGGTATTATAGTAATCAGGTTGCACGAGCGGCTTTGTATTATTTAGACAAACCAAGAGTGAATGGTGT GATCCATGTGACGGCTTTTGGCTGTGGTCCCGATGCTATGGTCGATAAATTAGTAGAATTAGAATGCAAACAAAATGGAG TTCCTTTCTTGACACTATCTTTAGATGAACACACCGGAGAAGCTGGTGTAGGTACTAGAGTAGAAGCCTTTGTGGATATG TTGAAGAGAAAGAGGGGATTATAA
Upstream 100 bases:
>100_bases AGCTTTTTAAGTTGCAAAAAAAATGAAATTAATTTAAAATCGAAGGGAATAGAAGTGTATATACTAGTTTAGATTTAGAT CGGAAAGGAGAGTGGGAGGT
Downstream 100 bases:
>100_bases TGAGAAAGGTTACTTTTCCCAGAATGGGGACTTCTTATATTGCGTTTAAAATGCTTGTGGAGGACTTGGGTCATGAAGCT GTGACACCACCGCCGCCTAC
Product: hypothetical protein
Products: NA
Alternate protein names: BadF/BadG/BcrA/BcrD ATPase Family Protein; CoA Activase; Activator Of-2-Hydroxyglutaryl-CoA Dehydratase; 2-Hydroxyglutaryl-CoA Dehydratase Activator; CoA-Substrate-Specific Activase Domain-Containing Protein; BadF/BadG/BcrA/BcrD ATPase; Activator Of -2-Hydroxyglutaryl-CoA Dehydratase; CoA-Substrate-Specific Activase Domain Protein; Chaperone Protein DNAJ; (R)-2-Hydroxyglutaryl-CoA Dehydratase Activator; CoA- Activase
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MTTKIGIPRALAYFTFFPLWITFFEQLNMDVMVSSESNKQVLDQGVKETVNDACIPIKIYHGHVKDLTGKVDYLFVPRLV SLDGEETVCPKFLGLPDMVRYSIEGLPPLIDERLDLRKGRFELWKFFYRIGRTFNKGFLEIFKAYQVACREYQKYRNLLT QGFTPQNAWEALRGEKNLDSNNNKTQSEDISIALLGYPYTIYDSYISVGLFERLKNMGVNVLTKDNVPPQELLKQRKNFS KEMFWYYSNQVARAALYYLDKPRVNGVIHVTAFGCGPDAMVDKLVELECKQNGVPFLTLSLDEHTGEAGVGTRVEAFVDM LKRKRGL
Sequences:
>Translated_327_residues MTTKIGIPRALAYFTFFPLWITFFEQLNMDVMVSSESNKQVLDQGVKETVNDACIPIKIYHGHVKDLTGKVDYLFVPRLV SLDGEETVCPKFLGLPDMVRYSIEGLPPLIDERLDLRKGRFELWKFFYRIGRTFNKGFLEIFKAYQVACREYQKYRNLLT QGFTPQNAWEALRGEKNLDSNNNKTQSEDISIALLGYPYTIYDSYISVGLFERLKNMGVNVLTKDNVPPQELLKQRKNFS KEMFWYYSNQVARAALYYLDKPRVNGVIHVTAFGCGPDAMVDKLVELECKQNGVPFLTLSLDEHTGEAGVGTRVEAFVDM LKRKRGL >Mature_326_residues TTKIGIPRALAYFTFFPLWITFFEQLNMDVMVSSESNKQVLDQGVKETVNDACIPIKIYHGHVKDLTGKVDYLFVPRLVS LDGEETVCPKFLGLPDMVRYSIEGLPPLIDERLDLRKGRFELWKFFYRIGRTFNKGFLEIFKAYQVACREYQKYRNLLTQ GFTPQNAWEALRGEKNLDSNNNKTQSEDISIALLGYPYTIYDSYISVGLFERLKNMGVNVLTKDNVPPQELLKQRKNFSK EMFWYYSNQVARAALYYLDKPRVNGVIHVTAFGCGPDAMVDKLVELECKQNGVPFLTLSLDEHTGEAGVGTRVEAFVDML KRKRGL
Specific function: Unknown
COG id: COG3580
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37614; Mature: 37483
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTKIGIPRALAYFTFFPLWITFFEQLNMDVMVSSESNKQVLDQGVKETVNDACIPIKIY CCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEE HGHVKDLTGKVDYLFVPRLVSLDGEETVCPKFLGLPDMVRYSIEGLPPLIDERLDLRKGR CCCHHHHCCCCCEEEECHHCCCCCCCCCCHHHCCCHHHHHHHHCCCCHHHHHHHHHHCCH FELWKFFYRIGRTFNKGFLEIFKAYQVACREYQKYRNLLTQGFTPQNAWEALRGEKNLDS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCC NNNKTQSEDISIALLGYPYTIYDSYISVGLFERLKNMGVNVLTKDNVPPQELLKQRKNFS CCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCC KEMFWYYSNQVARAALYYLDKPRVNGVIHVTAFGCGPDAMVDKLVELECKQNGVPFLTLS HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEE LDEHTGEAGVGTRVEAFVDMLKRKRGL ECCCCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure TTKIGIPRALAYFTFFPLWITFFEQLNMDVMVSSESNKQVLDQGVKETVNDACIPIKIY CCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEE HGHVKDLTGKVDYLFVPRLVSLDGEETVCPKFLGLPDMVRYSIEGLPPLIDERLDLRKGR CCCHHHHCCCCCEEEECHHCCCCCCCCCCHHHCCCHHHHHHHHCCCCHHHHHHHHHHCCH FELWKFFYRIGRTFNKGFLEIFKAYQVACREYQKYRNLLTQGFTPQNAWEALRGEKNLDS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCC NNNKTQSEDISIALLGYPYTIYDSYISVGLFERLKNMGVNVLTKDNVPPQELLKQRKNFS CCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCC KEMFWYYSNQVARAALYYLDKPRVNGVIHVTAFGCGPDAMVDKLVELECKQNGVPFLTLS HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEE LDEHTGEAGVGTRVEAFVDMLKRKRGL ECCCCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA