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The map label for this gene is 188584645

Identifier: 188584645

GI number: 188584645

Start: 2912

End: 3133

Strand: Direct

Name: 188584645

Synonym: Nther_0003

Alternate gene names: NA

Gene position: 2912-3133 (Clockwise)

Preceding gene: 188584644

Following gene: 188584646

Centisome position: 0.09

GC content: 30.63

Gene sequence:

>222_bases
ATGAGTAAGCGTAAAGTTGAGATTAATAGTGAATATATCACCTTAGGGCAATTGTTGAAGTATGTAAACATTGTTGCTAC
CGGTGGAGAAGTTAAACATTTTTTGAAAGAAGAAGATATTGAAGTAAATGGAGAAAAAACAGAACAAAGAGGAAAAAAGT
TATATCCAGGGGATATTGTTAACTTAAAAGACCAAGAGGAAATCATTGAAATAACTAAATGA

Upstream 100 bases:

>100_bases
GGCTCTTACAGCCCTATGATCATCCGTCCTAGGGAAAATGATCAGTACTTTCATCTCATACTGCCAGTAAGAGCTTTTTA
AACTGTTTAGGAGTGATATT

Downstream 100 bases:

>100_bases
TAATATTATTTGGATCTCCGAAGGAGTGGTCCTTTGAAATTAACAGAATTGTGTCTTAAAAATTTTCGCAATTACTCTAA
TCTAAAACTGAATTTTAAAA

Product: S4-like RNA binding protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 73; Mature: 72

Protein sequence:

>73_residues
MSKRKVEINSEYITLGQLLKYVNIVATGGEVKHFLKEEDIEVNGEKTEQRGKKLYPGDIVNLKDQEEIIEITK

Sequences:

>Translated_73_residues
MSKRKVEINSEYITLGQLLKYVNIVATGGEVKHFLKEEDIEVNGEKTEQRGKKLYPGDIVNLKDQEEIIEITK
>Mature_72_residues
SKRKVEINSEYITLGQLLKYVNIVATGGEVKHFLKEEDIEVNGEKTEQRGKKLYPGDIVNLKDQEEIIEITK

Specific function: Unknown

COG id: COG2501

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8392; Mature: 8261

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRKVEINSEYITLGQLLKYVNIVATGGEVKHFLKEEDIEVNGEKTEQRGKKLYPGDIV
CCCCEEECCCCEEEHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCEE
NLKDQEEIIEITK
CCCCCHHHHEECC
>Mature Secondary Structure 
SKRKVEINSEYITLGQLLKYVNIVATGGEVKHFLKEEDIEVNGEKTEQRGKKLYPGDIV
CCCEEECCCCEEEHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCEE
NLKDQEEIIEITK
CCCCCHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA