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The map label for this gene is omp85 [H]

Identifier: 188527496

GI number: 188527496

Start: 687246

End: 689891

Strand: Reverse

Name: omp85 [H]

Synonym: HPSH_03580

Alternate gene names: 188527496

Gene position: 689891-687246 (Counterclockwise)

Preceding gene: 188527497

Following gene: 188527495

Centisome position: 42.89

GC content: 42.74

Gene sequence:

>2646_bases
TTGACTTCTCCAAAAGAAGCCTCTCAAGAATCTCAAAAAAATGAGGCTCAAAGAAATGAAGCTCAAAAAGAAACCTCTCA
ATCAAATCAAACGCCTAAAGAAATGAAAGTCAAGTCCGTTTCTTATGTTGGGCTTTCTTACATGTCTGACATGCTCGCTA
ATGAAATTGTAAAAATTCGTGTGGGCGATATTGTGGATTCTAAAAAAATAGACACCGCTGTTTTGGCTTTATTTAATCAA
GGGTATTTTAAAGATGTTTATGCCACTTTTGAAGGCGGCATATTAGAGTTTCATTTTGATGAAAAAGCCAGAATTGCCGG
GGTAGAAATCAAGGGTTATGGGACTGAAAAGGAAAAAGACGGCTTAAAATCCCAAATGGGGATCAAAAAGGGCGACACCT
TTGATGAGCAAAAATTAGAGCATGCTAAAACGGCTTTAAAATCCGCTTTAGAGGGGCAGGGCTATTATGGGAGCGTGGTG
GAGGTGCGCACCCAAAAGGTCAGTGAGGGCGCGTTATTAATCGTGTTTGATGTGAATAGGGGGGATAGCATTTATATCAA
ACAATCCATTTATGAGGGAAGCGCGAAATTAAAACGCCGCATGATTGAATCTTTGAGCGCGAACAAGCAACGAGATTTCA
TGGGCTGGATGTGGGGCTTGAATGATGGGAAATTGCGTTTAGATCAATTAGAATACGATTCTATGCGTATCCAAGATGTG
TATATGCGTAGGGGTTACTTAGACGCTCATATTTCTTCGCCTTTTTTGAAAACGGATTTTTCTACCCATGACGCTAAGCT
TCATTATAAAGTCAAAGAAGGGATCCAATACAGGATTTCAGACATTTTAATAGAGATTGACAACCCGGTAGTCCCCTTAA
AAACCTTAGAAAAAGCGCTTAAAGTTAAAAGAAAAGATGTCTTTAATATTGAGCATTTAAGAGCGGATGCACAAATTTTA
AAAACCGAAATTGCCGATAAGGGTTATGCGTTTGCGGTGGTGAAGCCAGACTTGGATAAAGATGAAAAAAACGGACTTGT
GAAAGTCATTTATCGTATTGAAGTGGGCGATATGGTGTATATCAATGATGTCATCATTTCAGGGAACCAGCGTACAAGCG
ATAGGATCATCAGAAGGGAGTTATTGTTAGGGCCTAAGGATAAATACAACTTGACTAAACTGAGAAATTCCGAAAATTCT
TTAAGGCGTTTAGGGTTTTTCTCTAAAGTCAAAATTGAAGAAAAAAGGGTGAATAGTTCGCTTATGGATTTGTTAGTGAG
CGTAGAAGAGGGGCGCACTGGGCAGTTGCAATTTGGGTTAGGCTATGGCTCTTATGGAGGACTTATGCTTAATGGGAGCG
TGAGCGAAAGAAACCTTTTTGGCACAGGGCAAAGCATGAGCTTGTATGCTAACATCGCTACAGGGGGGGGCAGATCTTAT
CCGGGCATGCCAAAAGGAGCGGGTCGTATGTTTGCTGGGAATTTGAGCCTGACTAATCCTAGGATTTTTGACAGCTGGTA
TAGCTCTACGATCAATCTTTATGCGGATTATAGGATAAGCTACCAATACATCCAACAAGGTGGGGGCTTTGGGGTGAATG
TCGGGCGCATGCTGGGTAACAGAACCCATGTGAGCTTAGGGTATAACTTGAATGTTACCAAACTCCTTGGTTTCAGCAGC
CCTTTATACAACCGCTACTATTCCTCTGTTAATGAAGTGGTCGCTCCAAGGCAATGCTCTACCCCCGCATCGGTGATTAT
CAATCGCTTATCAGGCGGTAAAACCCCCTTACAACCTGAAAATTGTTCTAGCCCTGGAGCGATCACCACTTCACCAGAAA
TAAAAGGGATTTGGGATAGGGATTACCATACGCCTATCACCAGCTCTTTCACCCTTGATGTGAGCTATGACAACACCGAT
GATTATTACTTCCCTAGAAATGGGGTTATCTTTAGCTCCTATGCGACGATGTCTGGCTTGCCAAGCTCTGGCACGCTCAA
TTCGTGGAACGGGTTAGGCGGGAATGTCCGTAACACTAAAGTTTATGGTAAATTCGCCGCTTACCACCATTTGCAAAAAT
ATTTATTGATAGATTTGATCGCTCGCTTTAAAACGCAAGGGGGCTATATCTTTAGGTATAACACCGATGATTACTTGCCC
TTAAACTCCACCTTCTACATGGGGGGCGTAACCACGGTGAGAGGCTTTAGGAACGGATCGGTTACGCCTAAAGACGAATT
TGGCTTGTGGCTTGGGGGCGATGGGATATTCACCGCTTCTACTGAATTAAGCTATGGGGTGTTAAAAGCGGCTAAAATGC
GCTTAGCGTGGTTTTTTGACTTTGGTTTCTTGACCTTTAAAACCCCAACTAGGGGGAGCTTCTTCTATAACGCTCCCTTC
ACAACAGCGAATTTTAAAGATTATGGCGTTATAGGGGCTGGGTTTGAAAGAGCGACTTGGAGGGCTTCTACAGGCTTGCA
GATTGAATGGATTTCGCCCATGGGGCCTTTGGTGCTCATATTCCCTATAGCGTTTTTCAACCAATGGGGCGATGGCAATG
GCAAGAAATGTAAAGGGCTATGCTTCAACCCTAACATGAACGATTACACGCAACACTTTGAATTTTCTATGGGAACAAGG
TTTTAA

Upstream 100 bases:

>100_bases
GGAAATCAGTATTAAAAAATTTATTCTATCTTCTCTTGTTTTCGCATGTATCAATACCAGCGTTGAAGCTTTAGAAAATG
ACGGCTCTAAACCAAACGAT

Downstream 100 bases:

>100_bases
AATGCGCATTAACAGAGAAGAAATTTTAGATCTAATGAAAAACGCGCCCTTGAAAGAATTAGGGCAAAAGGCTTTAGAAA
TCAAGCAACGCTTGCACCCT

Product: protective surface antigen D15

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 881; Mature: 880

Protein sequence:

>881_residues
MTSPKEASQESQKNEAQRNEAQKETSQSNQTPKEMKVKSVSYVGLSYMSDMLANEIVKIRVGDIVDSKKIDTAVLALFNQ
GYFKDVYATFEGGILEFHFDEKARIAGVEIKGYGTEKEKDGLKSQMGIKKGDTFDEQKLEHAKTALKSALEGQGYYGSVV
EVRTQKVSEGALLIVFDVNRGDSIYIKQSIYEGSAKLKRRMIESLSANKQRDFMGWMWGLNDGKLRLDQLEYDSMRIQDV
YMRRGYLDAHISSPFLKTDFSTHDAKLHYKVKEGIQYRISDILIEIDNPVVPLKTLEKALKVKRKDVFNIEHLRADAQIL
KTEIADKGYAFAVVKPDLDKDEKNGLVKVIYRIEVGDMVYINDVIISGNQRTSDRIIRRELLLGPKDKYNLTKLRNSENS
LRRLGFFSKVKIEEKRVNSSLMDLLVSVEEGRTGQLQFGLGYGSYGGLMLNGSVSERNLFGTGQSMSLYANIATGGGRSY
PGMPKGAGRMFAGNLSLTNPRIFDSWYSSTINLYADYRISYQYIQQGGGFGVNVGRMLGNRTHVSLGYNLNVTKLLGFSS
PLYNRYYSSVNEVVAPRQCSTPASVIINRLSGGKTPLQPENCSSPGAITTSPEIKGIWDRDYHTPITSSFTLDVSYDNTD
DYYFPRNGVIFSSYATMSGLPSSGTLNSWNGLGGNVRNTKVYGKFAAYHHLQKYLLIDLIARFKTQGGYIFRYNTDDYLP
LNSTFYMGGVTTVRGFRNGSVTPKDEFGLWLGGDGIFTASTELSYGVLKAAKMRLAWFFDFGFLTFKTPTRGSFFYNAPF
TTANFKDYGVIGAGFERATWRASTGLQIEWISPMGPLVLIFPIAFFNQWGDGNGKKCKGLCFNPNMNDYTQHFEFSMGTR
F

Sequences:

>Translated_881_residues
MTSPKEASQESQKNEAQRNEAQKETSQSNQTPKEMKVKSVSYVGLSYMSDMLANEIVKIRVGDIVDSKKIDTAVLALFNQ
GYFKDVYATFEGGILEFHFDEKARIAGVEIKGYGTEKEKDGLKSQMGIKKGDTFDEQKLEHAKTALKSALEGQGYYGSVV
EVRTQKVSEGALLIVFDVNRGDSIYIKQSIYEGSAKLKRRMIESLSANKQRDFMGWMWGLNDGKLRLDQLEYDSMRIQDV
YMRRGYLDAHISSPFLKTDFSTHDAKLHYKVKEGIQYRISDILIEIDNPVVPLKTLEKALKVKRKDVFNIEHLRADAQIL
KTEIADKGYAFAVVKPDLDKDEKNGLVKVIYRIEVGDMVYINDVIISGNQRTSDRIIRRELLLGPKDKYNLTKLRNSENS
LRRLGFFSKVKIEEKRVNSSLMDLLVSVEEGRTGQLQFGLGYGSYGGLMLNGSVSERNLFGTGQSMSLYANIATGGGRSY
PGMPKGAGRMFAGNLSLTNPRIFDSWYSSTINLYADYRISYQYIQQGGGFGVNVGRMLGNRTHVSLGYNLNVTKLLGFSS
PLYNRYYSSVNEVVAPRQCSTPASVIINRLSGGKTPLQPENCSSPGAITTSPEIKGIWDRDYHTPITSSFTLDVSYDNTD
DYYFPRNGVIFSSYATMSGLPSSGTLNSWNGLGGNVRNTKVYGKFAAYHHLQKYLLIDLIARFKTQGGYIFRYNTDDYLP
LNSTFYMGGVTTVRGFRNGSVTPKDEFGLWLGGDGIFTASTELSYGVLKAAKMRLAWFFDFGFLTFKTPTRGSFFYNAPF
TTANFKDYGVIGAGFERATWRASTGLQIEWISPMGPLVLIFPIAFFNQWGDGNGKKCKGLCFNPNMNDYTQHFEFSMGTR
F
>Mature_880_residues
TSPKEASQESQKNEAQRNEAQKETSQSNQTPKEMKVKSVSYVGLSYMSDMLANEIVKIRVGDIVDSKKIDTAVLALFNQG
YFKDVYATFEGGILEFHFDEKARIAGVEIKGYGTEKEKDGLKSQMGIKKGDTFDEQKLEHAKTALKSALEGQGYYGSVVE
VRTQKVSEGALLIVFDVNRGDSIYIKQSIYEGSAKLKRRMIESLSANKQRDFMGWMWGLNDGKLRLDQLEYDSMRIQDVY
MRRGYLDAHISSPFLKTDFSTHDAKLHYKVKEGIQYRISDILIEIDNPVVPLKTLEKALKVKRKDVFNIEHLRADAQILK
TEIADKGYAFAVVKPDLDKDEKNGLVKVIYRIEVGDMVYINDVIISGNQRTSDRIIRRELLLGPKDKYNLTKLRNSENSL
RRLGFFSKVKIEEKRVNSSLMDLLVSVEEGRTGQLQFGLGYGSYGGLMLNGSVSERNLFGTGQSMSLYANIATGGGRSYP
GMPKGAGRMFAGNLSLTNPRIFDSWYSSTINLYADYRISYQYIQQGGGFGVNVGRMLGNRTHVSLGYNLNVTKLLGFSSP
LYNRYYSSVNEVVAPRQCSTPASVIINRLSGGKTPLQPENCSSPGAITTSPEIKGIWDRDYHTPITSSFTLDVSYDNTDD
YYFPRNGVIFSSYATMSGLPSSGTLNSWNGLGGNVRNTKVYGKFAAYHHLQKYLLIDLIARFKTQGGYIFRYNTDDYLPL
NSTFYMGGVTTVRGFRNGSVTPKDEFGLWLGGDGIFTASTELSYGVLKAAKMRLAWFFDFGFLTFKTPTRGSFFYNAPFT
TANFKDYGVIGAGFERATWRASTGLQIEWISPMGPLVLIFPIAFFNQWGDGNGKKCKGLCFNPNMNDYTQHFEFSMGTRF

Specific function: Unknown

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen D15 family [H]

Homologues:

Organism=Escherichia coli, GI1786374, Length=437, Percent_Identity=23.7986270022883, Blast_Score=123, Evalue=5e-29,

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR016474
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 98895; Mature: 98763

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSPKEASQESQKNEAQRNEAQKETSQSNQTPKEMKVKSVSYVGLSYMSDMLANEIVKIR
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEEHEEHHHHHHHHHHHHHHEEEEE
VGDIVDSKKIDTAVLALFNQGYFKDVYATFEGGILEFHFDEKARIAGVEIKGYGTEKEKD
ECCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEECCCCEEEEEEEECCCCCHHHH
GLKSQMGIKKGDTFDEQKLEHAKTALKSALEGQGYYGSVVEVRTQKVSEGALLIVFDVNR
CHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCEEEEEECCC
GDSIYIKQSIYEGSAKLKRRMIESLSANKQRDFMGWMWGLNDGKLRLDQLEYDSMRIQDV
CCEEEEEECHHCCHHHHHHHHHHHHCCCCCCCHHHEEEECCCCCEEEEEECCCCCHHHHH
YMRRGYLDAHISSPFLKTDFSTHDAKLHYKVKEGIQYRISDILIEIDNPVVPLKTLEKAL
HHHCCCEEECCCCCEEECCCCCCCEEEEEEECCCHHEEEEEEEEECCCCEECHHHHHHHH
KVKRKDVFNIEHLRADAQILKTEIADKGYAFAVVKPDLDKDEKNGLVKVIYRIEVGDMVY
HHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEEEEEECCEEE
INDVIISGNQRTSDRIIRRELLLGPKDKYNLTKLRNSENSLRRLGFFSKVKIEEKRVNSS
EEEEEEECCCCHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHCCHHHEEEHHHHHHHH
LMDLLVSVEEGRTGQLQFGLGYGSYGGLMLNGSVSERNLFGTGQSMSLYANIATGGGRSY
HHHHHHHHCCCCCCEEEEECCCCCCCCEEEECCCCCCEEECCCCCEEEEEEEECCCCCCC
PGMPKGAGRMFAGNLSLTNPRIFDSWYSSTINLYADYRISYQYIQQGGGFGVNVGRMLGN
CCCCCCCCCEEECCEECCCCCHHHHHHCCEEEEEEEEEEEEEHHHCCCCCCEEHHHHHCC
RTHVSLGYNLNVTKLLGFSSPLYNRYYSSVNEVVAPRQCSTPASVIINRLSGGKTPLQPE
CEEEEEECCCCHHHEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCC
NCSSPGAITTSPEIKGIWDRDYHTPITSSFTLDVSYDNTDDYYFPRNGVIFSSYATMSGL
CCCCCCCEECCCCCCEECCCCCCCCCCCEEEEEEEECCCCCEEECCCCEEEECCHHHCCC
PSSGTLNSWNGLGGNVRNTKVYGKFAAYHHLQKYLLIDLIARFKTQGGYIFRYNTDDYLP
CCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEC
LNSTFYMGGVTTVRGFRNGSVTPKDEFGLWLGGDGIFTASTELSYGVLKAAKMRLAWFFD
CCCEEEECCEEEEEECCCCCCCCCHHCCEEECCCEEEEECCCCHHHHHHHHHHEEEEEEE
FGFLTFKTPTRGSFFYNAPFTTANFKDYGVIGAGFERATWRASTGLQIEWISPMGPLVLI
ECEEEEECCCCCCEEECCCCCCCCCCCCCEEECCCCCCEEECCCCEEEEEECCCCCCHHH
FPIAFFNQWGDGNGKKCKGLCFNPNMNDYTQHFEFSMGTRF
HHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHEEEECCCCC
>Mature Secondary Structure 
TSPKEASQESQKNEAQRNEAQKETSQSNQTPKEMKVKSVSYVGLSYMSDMLANEIVKIR
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEEHEEHHHHHHHHHHHHHHEEEEE
VGDIVDSKKIDTAVLALFNQGYFKDVYATFEGGILEFHFDEKARIAGVEIKGYGTEKEKD
ECCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEECCCCEEEEEEEECCCCCHHHH
GLKSQMGIKKGDTFDEQKLEHAKTALKSALEGQGYYGSVVEVRTQKVSEGALLIVFDVNR
CHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCEEEEEECCC
GDSIYIKQSIYEGSAKLKRRMIESLSANKQRDFMGWMWGLNDGKLRLDQLEYDSMRIQDV
CCEEEEEECHHCCHHHHHHHHHHHHCCCCCCCHHHEEEECCCCCEEEEEECCCCCHHHHH
YMRRGYLDAHISSPFLKTDFSTHDAKLHYKVKEGIQYRISDILIEIDNPVVPLKTLEKAL
HHHCCCEEECCCCCEEECCCCCCCEEEEEEECCCHHEEEEEEEEECCCCEECHHHHHHHH
KVKRKDVFNIEHLRADAQILKTEIADKGYAFAVVKPDLDKDEKNGLVKVIYRIEVGDMVY
HHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEEEEEECCEEE
INDVIISGNQRTSDRIIRRELLLGPKDKYNLTKLRNSENSLRRLGFFSKVKIEEKRVNSS
EEEEEEECCCCHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHCCHHHEEEHHHHHHHH
LMDLLVSVEEGRTGQLQFGLGYGSYGGLMLNGSVSERNLFGTGQSMSLYANIATGGGRSY
HHHHHHHHCCCCCCEEEEECCCCCCCCEEEECCCCCCEEECCCCCEEEEEEEECCCCCCC
PGMPKGAGRMFAGNLSLTNPRIFDSWYSSTINLYADYRISYQYIQQGGGFGVNVGRMLGN
CCCCCCCCCEEECCEECCCCCHHHHHHCCEEEEEEEEEEEEEHHHCCCCCCEEHHHHHCC
RTHVSLGYNLNVTKLLGFSSPLYNRYYSSVNEVVAPRQCSTPASVIINRLSGGKTPLQPE
CEEEEEECCCCHHHEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCC
NCSSPGAITTSPEIKGIWDRDYHTPITSSFTLDVSYDNTDDYYFPRNGVIFSSYATMSGL
CCCCCCCEECCCCCCEECCCCCCCCCCCEEEEEEEECCCCCEEECCCCEEEECCHHHCCC
PSSGTLNSWNGLGGNVRNTKVYGKFAAYHHLQKYLLIDLIARFKTQGGYIFRYNTDDYLP
CCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEC
LNSTFYMGGVTTVRGFRNGSVTPKDEFGLWLGGDGIFTASTELSYGVLKAAKMRLAWFFD
CCCEEEECCEEEEEECCCCCCCCCHHCCEEECCCEEEEECCCCHHHHHHHHHHEEEEEEE
FGFLTFKTPTRGSFFYNAPFTTANFKDYGVIGAGFERATWRASTGLQIEWISPMGPLVLI
ECEEEEECCCCCCEEECCCCCCCCCCCCCEEECCCCCCEEECCCCEEEEEECCCCCCHHH
FPIAFFNQWGDGNGKKCKGLCFNPNMNDYTQHFEFSMGTRF
HHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]