| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is acxB [H]
Identifier: 188527456
GI number: 188527456
Start: 640879
End: 643176
Strand: Reverse
Name: acxB [H]
Synonym: HPSH_03370
Alternate gene names: 188527456
Gene position: 643176-640879 (Counterclockwise)
Preceding gene: 188527457
Following gene: 188527455
Centisome position: 39.98
GC content: 43.73
Gene sequence:
>2298_bases ATGGCAAATTTATTGAAAAACGGCAAAACTTTAAAACAAGCTAGAGATGAAATCCTAGCCAGGACAGAAAAAACAGGGCA TTATAATGGTCTCAAAAAACTAGAGTTTAAAGAAAGAGATCCGATCGGTTATGAGAAGATGTTCTCTAAACTAAGGGGCG GTATCGTGCATGCCAGAGAAACAGCTAAAAGGATTGCGGCAAGCCCTATTGTTGAGCAAGAGGGGGAATTGTGCTTCACG CTTTATAACGCTGTGGGCGATAGCGTGCTGACTTCTACGGGCATCATTATCCATGTAGGCACTATGGGATCAGCTATCAA ATACATGGTAGAGAATAATTGGGAAGATAACCCCGGTATCAATGACAAGGATATTTTCACCAATAACGACTGTGCGATTG GGAATGTGCACCCATGCGATATTATGACTCTTGTGCCTATTTTCCACGATGAAAAATTGATTGGGTGGGTAGGCGGCGTT ACGCATGTGATTGATACCGGTTCGGTTACTCCAGGATCAATGAGCACTGGACAGGTTCAAAGATTTGGGGATGGATACAT GATCACTTGCCGTAAGACAGGAGCGAACGATGAAAGCTTTAAAGATTGGTTGCATGAATCTCAAAGATCGGTTCGCACGC CTAAATATTGGATTCTAGATGAAAGGACTAGGATTGCAGGATGCCACATGATTAGGGATTTAGTGATGGAAGTCATTAAA GAAGATGGCATTGATTCTTACATGCGATTCATTGATGAGGTGATTGAAGAGGGCAGAAGAGGTCTTATCTCTAGAATCAA ATCCATGACCATACCAGGCAAGTATAGAAAGGTAGCGTTTGTGGATGTGCCTTATGCACATAAAGATATTGGCGTGTGCT CTGAATTTGCTAAGCTAGACACGATCATGCACTCTCCTGTGGAAATCACTATCAATAAAGACGCTACATGGAAATTAGAT TTTGAAGGCGCATCTAGGTGGGGATGGCACTCTTTCAATTGCAACCAAGTGTCTTTCACTAGCGGTATTTGGGTGATGAT GACTCAAACGCTGATACCCACTTCTCGCATCAATGATGGCGCTTATTTCGCTACGCAGTTCAGGCTCAAAAAAGGGACTT GGATGAATCCAGATGACAGGCGCACCGGGCATGCTTATGCGTGGCATTTCTTGGTATCAGGCTGGAGCGCTTTGTGGAGA GGCTTATCTCAAGCGTATTACAGCCGAGGGTATTTAGAAGAGGTCAATTCCGGAAACGCTAACACTTCCAATTGGCTGCA AGGCGGTGGTATCAACCAGGATGGAGAAATCCATGCGGTGAATAGCTTTGAGACGAGTTCTTGTGGGACTGGAGCTTGCG CGATAAAAGACGGCTTGAATCACGCAGCGGCTATTTGGAATCCAGAAGGCGATATGGGCGATGTTGAAATTTGGGAAATG GCAGAGCCTCTTCTTTATCTAGGCAGGAATGTCAAAGCCAATACCGGTGGGTATGGAAAATATCGAGGCGGTAACGGGTT TGAAACCTTAAGAATGGTGTGGGGCGCGCATGATTGGACCATGTTCTTTATGGGTAATGGCTATATGAATAGCGATTGGG GTATGATGGGGGGCTATCCAGCGGCTAGTGGCTATAGGTTTGAAGCGCACAACACCGATTTAAAAAACAGGATTAAAAAT AACGCCAGCTTGCCTTTGGGGGGCGATTTTAACCCGACTGATCGAGATTATGAAAAGCACATTTCTCATGCGTCTCAAGT TAAAAGGGATAAGCAATGCATCACCACTGAGAACTGCTTTGATAATTATGACTTGTATTTGAATTACATCAAAGGCGGTC CTGGATTTGGCGATCCGATTGAAAGGGATTTGAATGCGATTTTAGAAGATCTCAACAGCAAACAGCTATTGCCAGAATAC GCTTACAAGGTTTATGGTGCGGTGGTGAGTCAAAATAAAGACGGTGTGTGGGTCGGCGATGAAGCCAAAACTAAGGCTAG AAGAAAAGAAATTCTTGAAAACAGAAAGGCTAGATCCATACCGGTAAAACAATGGATGGAGCAAGAAAGAAACGCTATCC TTGAAAAAGAGGCTTCCAAACAGGTTAAGCACATGTATGCGACTAGTTTTGATCTTTCGCCTAAGTTTTTAAACGATTTT AAAACATTCTGGAACTTGCCAAAGAGCTGGAGCGTGAAAGAAGATGAGCTTGGCGTATTCACCTATGGGTCTAAATACAG GATGGATTTGAATAAATTGCCTGATGTGCGCACGGTTGTGTTGGTTGATGAGAAATAA
Upstream 100 bases:
>100_bases AATCAGATGCGACCACTTTCGTGATACCCAAAGGCTTTGCGACAAGACTAGACAAACACCGATTGTTCCACTTGAAAGAA ATTAAATAAAGGAGTTCAAA
Downstream 100 bases:
>100_bases AGAAAGGAGAATGGTTATGTCAAAATACACACAAGAACAAATTAAAAATTTGGTAGAGGGGAACTTGGATTGGAACACTG TCTTAAAAATGCTTAGCATG
Product: N-methylhydantoinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 765; Mature: 764
Protein sequence:
>765_residues MANLLKNGKTLKQARDEILARTEKTGHYNGLKKLEFKERDPIGYEKMFSKLRGGIVHARETAKRIAASPIVEQEGELCFT LYNAVGDSVLTSTGIIIHVGTMGSAIKYMVENNWEDNPGINDKDIFTNNDCAIGNVHPCDIMTLVPIFHDEKLIGWVGGV THVIDTGSVTPGSMSTGQVQRFGDGYMITCRKTGANDESFKDWLHESQRSVRTPKYWILDERTRIAGCHMIRDLVMEVIK EDGIDSYMRFIDEVIEEGRRGLISRIKSMTIPGKYRKVAFVDVPYAHKDIGVCSEFAKLDTIMHSPVEITINKDATWKLD FEGASRWGWHSFNCNQVSFTSGIWVMMTQTLIPTSRINDGAYFATQFRLKKGTWMNPDDRRTGHAYAWHFLVSGWSALWR GLSQAYYSRGYLEEVNSGNANTSNWLQGGGINQDGEIHAVNSFETSSCGTGACAIKDGLNHAAAIWNPEGDMGDVEIWEM AEPLLYLGRNVKANTGGYGKYRGGNGFETLRMVWGAHDWTMFFMGNGYMNSDWGMMGGYPAASGYRFEAHNTDLKNRIKN NASLPLGGDFNPTDRDYEKHISHASQVKRDKQCITTENCFDNYDLYLNYIKGGPGFGDPIERDLNAILEDLNSKQLLPEY AYKVYGAVVSQNKDGVWVGDEAKTKARRKEILENRKARSIPVKQWMEQERNAILEKEASKQVKHMYATSFDLSPKFLNDF KTFWNLPKSWSVKEDELGVFTYGSKYRMDLNKLPDVRTVVLVDEK
Sequences:
>Translated_765_residues MANLLKNGKTLKQARDEILARTEKTGHYNGLKKLEFKERDPIGYEKMFSKLRGGIVHARETAKRIAASPIVEQEGELCFT LYNAVGDSVLTSTGIIIHVGTMGSAIKYMVENNWEDNPGINDKDIFTNNDCAIGNVHPCDIMTLVPIFHDEKLIGWVGGV THVIDTGSVTPGSMSTGQVQRFGDGYMITCRKTGANDESFKDWLHESQRSVRTPKYWILDERTRIAGCHMIRDLVMEVIK EDGIDSYMRFIDEVIEEGRRGLISRIKSMTIPGKYRKVAFVDVPYAHKDIGVCSEFAKLDTIMHSPVEITINKDATWKLD FEGASRWGWHSFNCNQVSFTSGIWVMMTQTLIPTSRINDGAYFATQFRLKKGTWMNPDDRRTGHAYAWHFLVSGWSALWR GLSQAYYSRGYLEEVNSGNANTSNWLQGGGINQDGEIHAVNSFETSSCGTGACAIKDGLNHAAAIWNPEGDMGDVEIWEM AEPLLYLGRNVKANTGGYGKYRGGNGFETLRMVWGAHDWTMFFMGNGYMNSDWGMMGGYPAASGYRFEAHNTDLKNRIKN NASLPLGGDFNPTDRDYEKHISHASQVKRDKQCITTENCFDNYDLYLNYIKGGPGFGDPIERDLNAILEDLNSKQLLPEY AYKVYGAVVSQNKDGVWVGDEAKTKARRKEILENRKARSIPVKQWMEQERNAILEKEASKQVKHMYATSFDLSPKFLNDF KTFWNLPKSWSVKEDELGVFTYGSKYRMDLNKLPDVRTVVLVDEK >Mature_764_residues ANLLKNGKTLKQARDEILARTEKTGHYNGLKKLEFKERDPIGYEKMFSKLRGGIVHARETAKRIAASPIVEQEGELCFTL YNAVGDSVLTSTGIIIHVGTMGSAIKYMVENNWEDNPGINDKDIFTNNDCAIGNVHPCDIMTLVPIFHDEKLIGWVGGVT HVIDTGSVTPGSMSTGQVQRFGDGYMITCRKTGANDESFKDWLHESQRSVRTPKYWILDERTRIAGCHMIRDLVMEVIKE DGIDSYMRFIDEVIEEGRRGLISRIKSMTIPGKYRKVAFVDVPYAHKDIGVCSEFAKLDTIMHSPVEITINKDATWKLDF EGASRWGWHSFNCNQVSFTSGIWVMMTQTLIPTSRINDGAYFATQFRLKKGTWMNPDDRRTGHAYAWHFLVSGWSALWRG LSQAYYSRGYLEEVNSGNANTSNWLQGGGINQDGEIHAVNSFETSSCGTGACAIKDGLNHAAAIWNPEGDMGDVEIWEMA EPLLYLGRNVKANTGGYGKYRGGNGFETLRMVWGAHDWTMFFMGNGYMNSDWGMMGGYPAASGYRFEAHNTDLKNRIKNN ASLPLGGDFNPTDRDYEKHISHASQVKRDKQCITTENCFDNYDLYLNYIKGGPGFGDPIERDLNAILEDLNSKQLLPEYA YKVYGAVVSQNKDGVWVGDEAKTKARRKEILENRKARSIPVKQWMEQERNAILEKEASKQVKHMYATSFDLSPKFLNDFK TFWNLPKSWSVKEDELGVFTYGSKYRMDLNKLPDVRTVVLVDEK
Specific function: Catalyzes the carboxylation of acetone to form acetoacetate. Has a reduced activity on butanone, and no activity on 2-pentatone, 3-pentatone, 2-hexanone, chloroacetone, pyruvate, phosphoenolpyruvate, acetaldehyde, propionaldehyde and propylene oxide [H]
COG id: COG0146
COG function: function code EQ; N-methylhydantoinase B/acetone carboxylase, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxoprolinase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003692 [H]
Pfam domain/function: PF02538 Hydantoinase_B [H]
EC number: =6.4.1.6 [H]
Molecular weight: Translated: 86513; Mature: 86382
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANLLKNGKTLKQARDEILARTEKTGHYNGLKKLEFKERDPIGYEKMFSKLRGGIVHARE CCCCHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEHHHH TAKRIAASPIVEQEGELCFTLYNAVGDSVLTSTGIIIHVGTMGSAIKYMVENNWEDNPGI HHHHHHHCCCHHCCCCEEEEHHHHHCCHHHHCCCEEEEECCCCHHHHHHHHCCCCCCCCC NDKDIFTNNDCAIGNVHPCDIMTLVPIFHDEKLIGWVGGVTHVIDTGSVTPGSMSTGQVQ CCCCCEECCCCCCCCCCCCCCEEEEHHHCCCHHHHHHCCHHHHEECCCCCCCCCCCCCHH RFGDGYMITCRKTGANDESFKDWLHESQRSVRTPKYWILDERTRIAGCHMIRDLVMEVIK CCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHH EDGIDSYMRFIDEVIEEGRRGLISRIKSMTIPGKYRKVAFVDVPYAHKDIGVCSEFAKLD HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHH TIMHSPVEITINKDATWKLDFEGASRWGWHSFNCNQVSFTSGIWVMMTQTLIPTSRINDG HHHCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEECCCEEEEHHHHHCCCCCCCCC AYFATQFRLKKGTWMNPDDRRTGHAYAWHFLVSGWSALWRGLSQAYYSRGYLEEVNSGNA EEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCC NTSNWLQGGGINQDGEIHAVNSFETSSCGTGACAIKDGLNHAAAIWNPEGDMGDVEIWEM CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEHHHCCCCCEEEECCCCCCCCCHHHHH AEPLLYLGRNVKANTGGYGKYRGGNGFETLRMVWGAHDWTMFFMGNGYMNSDWGMMGGYP HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCEECCCCCCCCCCC AASGYRFEAHNTDLKNRIKNNASLPLGGDFNPTDRDYEKHISHASQVKRDKQCITTENCF CCCCEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHCCC DNYDLYLNYIKGGPGFGDPIERDLNAILEDLNSKQLLPEYAYKVYGAVVSQNKDGVWVGD CCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEECC EAKTKARRKEILENRKARSIPVKQWMEQERNAILEKEASKQVKHMYATSFDLSPKFLNDF HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH KTFWNLPKSWSVKEDELGVFTYGSKYRMDLNKLPDVRTVVLVDEK HHHHCCCCCCCCCCCCCEEEECCCEEEECHHCCCCCEEEEEEECC >Mature Secondary Structure ANLLKNGKTLKQARDEILARTEKTGHYNGLKKLEFKERDPIGYEKMFSKLRGGIVHARE CCCHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEHHHH TAKRIAASPIVEQEGELCFTLYNAVGDSVLTSTGIIIHVGTMGSAIKYMVENNWEDNPGI HHHHHHHCCCHHCCCCEEEEHHHHHCCHHHHCCCEEEEECCCCHHHHHHHHCCCCCCCCC NDKDIFTNNDCAIGNVHPCDIMTLVPIFHDEKLIGWVGGVTHVIDTGSVTPGSMSTGQVQ CCCCCEECCCCCCCCCCCCCCEEEEHHHCCCHHHHHHCCHHHHEECCCCCCCCCCCCCHH RFGDGYMITCRKTGANDESFKDWLHESQRSVRTPKYWILDERTRIAGCHMIRDLVMEVIK CCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHH EDGIDSYMRFIDEVIEEGRRGLISRIKSMTIPGKYRKVAFVDVPYAHKDIGVCSEFAKLD HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHH TIMHSPVEITINKDATWKLDFEGASRWGWHSFNCNQVSFTSGIWVMMTQTLIPTSRINDG HHHCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEECCCEEEEHHHHHCCCCCCCCC AYFATQFRLKKGTWMNPDDRRTGHAYAWHFLVSGWSALWRGLSQAYYSRGYLEEVNSGNA EEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCC NTSNWLQGGGINQDGEIHAVNSFETSSCGTGACAIKDGLNHAAAIWNPEGDMGDVEIWEM CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEHHHCCCCCEEEECCCCCCCCCHHHHH AEPLLYLGRNVKANTGGYGKYRGGNGFETLRMVWGAHDWTMFFMGNGYMNSDWGMMGGYP HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCEECCCCCCCCCCC AASGYRFEAHNTDLKNRIKNNASLPLGGDFNPTDRDYEKHISHASQVKRDKQCITTENCF CCCCEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHCCC DNYDLYLNYIKGGPGFGDPIERDLNAILEDLNSKQLLPEYAYKVYGAVVSQNKDGVWVGD CCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEECC EAKTKARRKEILENRKARSIPVKQWMEQERNAILEKEASKQVKHMYATSFDLSPKFLNDF HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH KTFWNLPKSWSVKEDELGVFTYGSKYRMDLNKLPDVRTVVLVDEK HHHHCCCCCCCCCCCCCEEEECCCEEEECHHCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12003937 [H]