| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is acxA [H]
Identifier: 188527457
GI number: 188527457
Start: 643188
End: 645329
Strand: Reverse
Name: acxA [H]
Synonym: HPSH_03375
Alternate gene names: 188527457
Gene position: 645329-643188 (Counterclockwise)
Preceding gene: 188527458
Following gene: 188527456
Centisome position: 40.12
GC content: 44.96
Gene sequence:
>2142_bases ATGAAAGACGCAAAAGTTCAGGTGATGGGTATTGATGCCGGTGGCACCATGACGGACACATTTTTTGTGAAAGAAAATGG CAGTTTCGTAGTTGGTAAAGCCCAAAGCAACCCAGAAGATGAGAGCTTAGCTATTTACAATAGCTCACAAGATGCTTTAT CGCACTGGAAATCGGATGTGAATAAGGTTTATCCAGAGTTGGTCACTTGCGTTTACTCAGGCACGGCGATGCTCAATCGG GTCGTCCAAAGGCGTGGGATGGAAGTGGGCCTAATTTGCAATAAGGGTTTTGAGCAAATGCATTCTATGGGCAGGGCGTT GCAATCCTACTTGGGGTATGCGCTAGAAGAAAGGTTGCATATCAACACGCACAAGTATGATGATCCGCTGATTCCTTTAA AAAGGATTAGAGGCGTTACAGAAAGAACCGATGTCAAGGGGCAAGTGGTTATCCCAGTGCGCCTAGAAGAGGTTAAAGTT GCTGTTAAGGAGCTTTTAGAAGCAGGCGCAAAGGCCATTGTGATTTGCTTGTTGCAATCTCATAAAAACGCTGAAAGCGA GCGGATCGTTAGAGATATAGCGTTAAAAGAGATTGAAAAATTGGGTAAAAATATTCCTGTATTCGCTTCGGTGGATTACT ACCCTCAAAGAAAAGAAAGCCACAGAATGAACACCACTATCTTAGAAGCTTATGCGGCTGAGCCAAGCAGGCAAACTCTC TCTAAAGTCAGCAACCGCTTCAAAGAGCATGGCGCTAAATTTGATCTTAGGGTGATGGCAACACATGGAGGCACTATTAG TTGGAAGGCTAAAGAGCTTGCCAGAACGATCGTGAGCGGTCCTATTGGAGGCGTGATCGGATCTAAATTGCTAGGCGAAA CGCTTGGTTATGACAATATTGCATGCAGCGATATTGGCGGCACGAGCTTTGATATGGCGCTTATCGTTAAGAGCAATTTC AACATCGCTTCTGACCCTGATATGGCGCGCCTTGTTTTATCTCTACCGCTTGTGGCTATGGATTCCGTTGGTGCAGGTGC GGGGAGTTTTGTGCGCATTGATCCGCACAGCCGATCTGTCAAACTAGGGCCTGACAGCGCGGGGTATAGGGTTGGCACTT GTTGGAAAGACAGCGGATTAGACACGGTTTCAGTAACCGATTGCCATATTGTTTTAGGCTATTTGAACCCGGATAATTTC TTAGGCGGTTTAATCAAATTAGATGTGGATAGGGCTAAAAAACACATTAAAGAACAAATCGCTGATCCGCTAGGCATTAG CGTAGAAGATGCGGCTGCGGGTGTGATTGAGTTGCTTGATTTGGAGCTTAAAGAATACTTGCGATCCAATATTAGCGCTA AAGGGTATAGCCCGTCTGATTTTGTGTGTTTTTCGTATGGTGGTGCGGGGCCTGTGCATACCTATGGCTATACAGAAGGC TTAGGGTTTAAGGATGTGGTAGTGCCTGCGTGGGCGGCTGGATTTAGCGCTTTTGGTTGCGCTTGCGCTGATTTTGAATA CAGATACGATAAGAGCGTGGATATTGCTATTCCGCAGTATTCTTCAGACAAGTCAAAAGTAGAAGCATGCAAAATCATTC AAGACGCATGGGATGAATTGACCCTCAAAGTGATTGAAGAGTTCAAGATCAATGGATTTTCTCAAAAAGATGTGATCTTA AGACCTGGATACAGGATGCAGTATATGGGGCAATTGAATGATTTAGAGATCACTTCTCCTGTGTCAAAAGCTGCAAGCGT GGCTGATTGGGAAGAGATTGTCAAAGAATATGAAAAAACCTACGCTCGTGTTTATTCCGAATCAGCGTGTTCTCCAGAGC TTGGTTTTAGCGTGACCGGCGTGATCATGCGTGGTGTTGTAGCTACGCAAAAACCTGTGATTCCGGTTGAAAAAGAGCAT GGCACTACGCCCCCAAAAGAAGCCAAAATAGGCGTTAGAAAATTCTATCGGCATAAAAAATGGGTGGATGCAGATGTGTG GCAAATGGAAAAATTACTGCCTGGAAATGAAGTCATAGGGCCTGCGATCGTGGAATCAGATGCGACCACTTTCGTGATAC CCAAAGGCTTTGCGACAAGACTAGACAAACACCGATTGTTCCACTTGAAAGAAATTAAATAA
Upstream 100 bases:
>100_bases TAAAAAAAATGATTTCCATTTTAAAATTTGTCCTACAATTCAAACAGGTTACCTTGATAGGTTACCTTGAGCAACACTTT AATACTAAGGAGTCTAAAAA
Downstream 100 bases:
>100_bases AGGAGTTCAAAATGGCAAATTTATTGAAAAACGGCAAAACTTTAAAACAAGCTAGAGATGAAATCCTAGCCAGGACAGAA AAAACAGGGCATTATAATGG
Product: hydantoin utilization protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 713; Mature: 713
Protein sequence:
>713_residues MKDAKVQVMGIDAGGTMTDTFFVKENGSFVVGKAQSNPEDESLAIYNSSQDALSHWKSDVNKVYPELVTCVYSGTAMLNR VVQRRGMEVGLICNKGFEQMHSMGRALQSYLGYALEERLHINTHKYDDPLIPLKRIRGVTERTDVKGQVVIPVRLEEVKV AVKELLEAGAKAIVICLLQSHKNAESERIVRDIALKEIEKLGKNIPVFASVDYYPQRKESHRMNTTILEAYAAEPSRQTL SKVSNRFKEHGAKFDLRVMATHGGTISWKAKELARTIVSGPIGGVIGSKLLGETLGYDNIACSDIGGTSFDMALIVKSNF NIASDPDMARLVLSLPLVAMDSVGAGAGSFVRIDPHSRSVKLGPDSAGYRVGTCWKDSGLDTVSVTDCHIVLGYLNPDNF LGGLIKLDVDRAKKHIKEQIADPLGISVEDAAAGVIELLDLELKEYLRSNISAKGYSPSDFVCFSYGGAGPVHTYGYTEG LGFKDVVVPAWAAGFSAFGCACADFEYRYDKSVDIAIPQYSSDKSKVEACKIIQDAWDELTLKVIEEFKINGFSQKDVIL RPGYRMQYMGQLNDLEITSPVSKAASVADWEEIVKEYEKTYARVYSESACSPELGFSVTGVIMRGVVATQKPVIPVEKEH GTTPPKEAKIGVRKFYRHKKWVDADVWQMEKLLPGNEVIGPAIVESDATTFVIPKGFATRLDKHRLFHLKEIK
Sequences:
>Translated_713_residues MKDAKVQVMGIDAGGTMTDTFFVKENGSFVVGKAQSNPEDESLAIYNSSQDALSHWKSDVNKVYPELVTCVYSGTAMLNR VVQRRGMEVGLICNKGFEQMHSMGRALQSYLGYALEERLHINTHKYDDPLIPLKRIRGVTERTDVKGQVVIPVRLEEVKV AVKELLEAGAKAIVICLLQSHKNAESERIVRDIALKEIEKLGKNIPVFASVDYYPQRKESHRMNTTILEAYAAEPSRQTL SKVSNRFKEHGAKFDLRVMATHGGTISWKAKELARTIVSGPIGGVIGSKLLGETLGYDNIACSDIGGTSFDMALIVKSNF NIASDPDMARLVLSLPLVAMDSVGAGAGSFVRIDPHSRSVKLGPDSAGYRVGTCWKDSGLDTVSVTDCHIVLGYLNPDNF LGGLIKLDVDRAKKHIKEQIADPLGISVEDAAAGVIELLDLELKEYLRSNISAKGYSPSDFVCFSYGGAGPVHTYGYTEG LGFKDVVVPAWAAGFSAFGCACADFEYRYDKSVDIAIPQYSSDKSKVEACKIIQDAWDELTLKVIEEFKINGFSQKDVIL RPGYRMQYMGQLNDLEITSPVSKAASVADWEEIVKEYEKTYARVYSESACSPELGFSVTGVIMRGVVATQKPVIPVEKEH GTTPPKEAKIGVRKFYRHKKWVDADVWQMEKLLPGNEVIGPAIVESDATTFVIPKGFATRLDKHRLFHLKEIK >Mature_713_residues MKDAKVQVMGIDAGGTMTDTFFVKENGSFVVGKAQSNPEDESLAIYNSSQDALSHWKSDVNKVYPELVTCVYSGTAMLNR VVQRRGMEVGLICNKGFEQMHSMGRALQSYLGYALEERLHINTHKYDDPLIPLKRIRGVTERTDVKGQVVIPVRLEEVKV AVKELLEAGAKAIVICLLQSHKNAESERIVRDIALKEIEKLGKNIPVFASVDYYPQRKESHRMNTTILEAYAAEPSRQTL SKVSNRFKEHGAKFDLRVMATHGGTISWKAKELARTIVSGPIGGVIGSKLLGETLGYDNIACSDIGGTSFDMALIVKSNF NIASDPDMARLVLSLPLVAMDSVGAGAGSFVRIDPHSRSVKLGPDSAGYRVGTCWKDSGLDTVSVTDCHIVLGYLNPDNF LGGLIKLDVDRAKKHIKEQIADPLGISVEDAAAGVIELLDLELKEYLRSNISAKGYSPSDFVCFSYGGAGPVHTYGYTEG LGFKDVVVPAWAAGFSAFGCACADFEYRYDKSVDIAIPQYSSDKSKVEACKIIQDAWDELTLKVIEEFKINGFSQKDVIL RPGYRMQYMGQLNDLEITSPVSKAASVADWEEIVKEYEKTYARVYSESACSPELGFSVTGVIMRGVVATQKPVIPVEKEH GTTPPKEAKIGVRKFYRHKKWVDADVWQMEKLLPGNEVIGPAIVESDATTFVIPKGFATRLDKHRLFHLKEIK
Specific function: Catalyzes the carboxylation of acetone to form acetoacetate. Has a reduced activity on butanone, and no activity on 2-pentatone, 3-pentatone, 2-hexanone, chloroacetone, pyruvate, phosphoenolpyruvate, acetaldehyde, propionaldehyde and propylene oxide [H]
COG id: COG0145
COG function: function code EQ; N-methylhydantoinase A/acetone carboxylase, beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxoprolinase family [H]
Homologues:
Organism=Homo sapiens, GI48314820, Length=515, Percent_Identity=24.8543689320388, Blast_Score=100, Evalue=4e-21, Organism=Caenorhabditis elegans, GI133901900, Length=725, Percent_Identity=22.2068965517241, Blast_Score=97, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6322634, Length=579, Percent_Identity=24.006908462867, Blast_Score=120, Evalue=9e-28, Organism=Drosophila melanogaster, GI45550492, Length=732, Percent_Identity=25.5464480874317, Blast_Score=132, Evalue=1e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008040 - InterPro: IPR002821 [H]
Pfam domain/function: PF05378 Hydant_A_N; PF01968 Hydantoinase_A [H]
EC number: =6.4.1.6 [H]
Molecular weight: Translated: 78548; Mature: 78548
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDAKVQVMGIDAGGTMTDTFFVKENGSFVVGKAQSNPEDESLAIYNSSQDALSHWKSDV CCCCEEEEEEECCCCCEEEEEEEECCCCEEEEECCCCCCCCEEEEECCCHHHHHHHHHHH NKVYPELVTCVYSGTAMLNRVVQRRGMEVGLICNKGFEQMHSMGRALQSYLGYALEERLH HHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHEE INTHKYDDPLIPLKRIRGVTERTDVKGQVVIPVRLEEVKVAVKELLEAGAKAIVICLLQS ECCCCCCCCCCCHHHHCCCCHHCCCCCEEEEEEEHHHHHHHHHHHHHCCCCEEEEEEHHC HKNAESERIVRDIALKEIEKLGKNIPVFASVDYYPQRKESHRMNTTILEAYAAEPSRQTL CCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHCCCCHHHHHHHHCCCHHHHH SKVSNRFKEHGAKFDLRVMATHGGTISWKAKELARTIVSGPIGGVIGSKLLGETLGYDNI HHHHHHHHHCCCCEEEEEEEECCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCE ACSDIGGTSFDMALIVKSNFNIASDPDMARLVLSLPLVAMDSVGAGAGSFVRIDPHSRSV EECCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHCCHHHHHCCCCCCCCEEEECCCCCEE KLGPDSAGYRVGTCWKDSGLDTVSVTDCHIVLGYLNPDNFLGGLIKLDVDRAKKHIKEQI EECCCCCCCEEEEEECCCCCCEEEEEEEEEEEEEECCHHHHCCEEEEEHHHHHHHHHHHH ADPLGISVEDAAAGVIELLDLELKEYLRSNISAKGYSPSDFVCFSYGGAGPVHTYGYTEG CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC LGFKDVVVPAWAAGFSAFGCACADFEYRYDKSVDIAIPQYSSDKSKVEACKIIQDAWDEL CCCCHHHHHHHHHHHHHHCCEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH TLKVIEEFKINGFSQKDVILRPGYRMQYMGQLNDLEITSPVSKAASVADWEEIVKEYEKT HHHHHHHHHCCCCCCCCEEECCCCCEEECCCCCCEEECCCHHHHHHHHHHHHHHHHHHHH YARVYSESACSPELGFSVTGVIMRGVVATQKPVIPVEKEHGTTPPKEAKIGVRKFYRHKK HHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC WVDADVWQMEKLLPGNEVIGPAIVESDATTFVIPKGFATRLDKHRLFHLKEIK CCCHHHHHHHHHCCCCCCCCCCEECCCCCEEEECCHHHHHHHHHHEEEEECCC >Mature Secondary Structure MKDAKVQVMGIDAGGTMTDTFFVKENGSFVVGKAQSNPEDESLAIYNSSQDALSHWKSDV CCCCEEEEEEECCCCCEEEEEEEECCCCEEEEECCCCCCCCEEEEECCCHHHHHHHHHHH NKVYPELVTCVYSGTAMLNRVVQRRGMEVGLICNKGFEQMHSMGRALQSYLGYALEERLH HHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHEE INTHKYDDPLIPLKRIRGVTERTDVKGQVVIPVRLEEVKVAVKELLEAGAKAIVICLLQS ECCCCCCCCCCCHHHHCCCCHHCCCCCEEEEEEEHHHHHHHHHHHHHCCCCEEEEEEHHC HKNAESERIVRDIALKEIEKLGKNIPVFASVDYYPQRKESHRMNTTILEAYAAEPSRQTL CCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHCCCCHHHHHHHHCCCHHHHH SKVSNRFKEHGAKFDLRVMATHGGTISWKAKELARTIVSGPIGGVIGSKLLGETLGYDNI HHHHHHHHHCCCCEEEEEEEECCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCE ACSDIGGTSFDMALIVKSNFNIASDPDMARLVLSLPLVAMDSVGAGAGSFVRIDPHSRSV EECCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHCCHHHHHCCCCCCCCEEEECCCCCEE KLGPDSAGYRVGTCWKDSGLDTVSVTDCHIVLGYLNPDNFLGGLIKLDVDRAKKHIKEQI EECCCCCCCEEEEEECCCCCCEEEEEEEEEEEEEECCHHHHCCEEEEEHHHHHHHHHHHH ADPLGISVEDAAAGVIELLDLELKEYLRSNISAKGYSPSDFVCFSYGGAGPVHTYGYTEG CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC LGFKDVVVPAWAAGFSAFGCACADFEYRYDKSVDIAIPQYSSDKSKVEACKIIQDAWDEL CCCCHHHHHHHHHHHHHHCCEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH TLKVIEEFKINGFSQKDVILRPGYRMQYMGQLNDLEITSPVSKAASVADWEEIVKEYEKT HHHHHHHHHCCCCCCCCEEECCCCCEEECCCCCCEEECCCHHHHHHHHHHHHHHHHHHHH YARVYSESACSPELGFSVTGVIMRGVVATQKPVIPVEKEHGTTPPKEAKIGVRKFYRHKK HHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC WVDADVWQMEKLLPGNEVIGPAIVESDATTFVIPKGFATRLDKHRLFHLKEIK CCCHHHHHHHHHCCCCCCCCCCEECCCCCEEEECCHHHHHHHHHHEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12003937 [H]