Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

Click here to switch to the map view.

The map label for this gene is ylxH [H]

Identifier: 188527222

GI number: 188527222

Start: 408811

End: 409695

Strand: Direct

Name: ylxH [H]

Synonym: HPSH_02145

Alternate gene names: 188527222

Gene position: 408811-409695 (Clockwise)

Preceding gene: 188527221

Following gene: 188527223

Centisome position: 25.41

GC content: 39.55

Gene sequence:

>885_bases
ATGAACAATCAAGCGAGTCGCTTAGATAATTTGATCAATATTAAAAACCCCAAAAGTTTTTTTGACAATAAAGGGAATAC
CAAATTCATCGCTATCACAAGCGGTAAGGGAGGCGTGGGGAAATCCAACATTAGCGCTAATTTAGCTTATGCTTTATACA
AGAAAGGTTATAAGGTAGGGGTGTTTGATGCGGATATTGGTTTAGCGAATTTAGATGTTATTTTTGGGGTGAAAACCCAT
AAAAATATCTTGCACGCTTTAAAAGGTGAGGCCAAATTGCAAGAAATCATTTGCGAGATTGAGCCCGGGCTTTGTCTTAT
TCCTGGGGATAGCGGCGAAGAAATTTTAAAATACATTAGCGGTGCAGAAGCTTTGGATCAATTCGTGGATGAAGAGGGGG
TTTTAAGCTCTTTGGATTATATTGTGGTTGATACAGGCGCTGGGATTGGAATCACTACGCAAGCGTTTTTGAACGCGAGC
GATTGCGTGGTGATTGTTACCACCCCCGATCCTTCAGCGATTACCGATGCGTATGCATGCATTAAAATCAACTCCAAAAA
CAAAGATGAATTGTTTCTTATCGCTAACATGGTAGCCCAACCTAAAGAGGGCAGGGCGACTTATGAAAGGCTGTTGAAAG
TGGCTAAAAACAATATCGCTTCATTAGAATTGCATTACTTAGGAGCGATTGAAAACAGCTCCTTATTGAAACGCTATGTG
AGAGAGCGCAAAATTTTGAGAAAAATAGCCCCTAATGATTTGTTTTCGCAATCCATTGATCAGATAGCGGGTCTTTTGGT
TTCTAAATTAGAAACCGGCGCTTTAGAAATACCAAAAGAAGGTTTTAAAAGCTTTTTTAAAAGGCTTTTGAGTTATTTGG
GGTAG

Upstream 100 bases:

>100_bases
CTGTTGGACAAGAAGTGCCTATGGATTTGAAAGTGGCCACTAATGAATATTTAGTGGATTGCATGCTAGATGGCTTTAGT
AACCCTAATAAGGAACAAGC

Downstream 100 bases:

>100_bases
GCTGATGAAAGTGCAAAATTTTATCCATTTTTCTGTTGTGGTAGGGTTTTTTTTAGGGTTAGTGTTTTCGGTGTTGAAAT
TCAATGAACCAGAGAGCATT

Product: ATP-binding protein (ylxH)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MNNQASRLDNLINIKNPKSFFDNKGNTKFIAITSGKGGVGKSNISANLAYALYKKGYKVGVFDADIGLANLDVIFGVKTH
KNILHALKGEAKLQEIICEIEPGLCLIPGDSGEEILKYISGAEALDQFVDEEGVLSSLDYIVVDTGAGIGITTQAFLNAS
DCVVIVTTPDPSAITDAYACIKINSKNKDELFLIANMVAQPKEGRATYERLLKVAKNNIASLELHYLGAIENSSLLKRYV
RERKILRKIAPNDLFSQSIDQIAGLLVSKLETGALEIPKEGFKSFFKRLLSYLG

Sequences:

>Translated_294_residues
MNNQASRLDNLINIKNPKSFFDNKGNTKFIAITSGKGGVGKSNISANLAYALYKKGYKVGVFDADIGLANLDVIFGVKTH
KNILHALKGEAKLQEIICEIEPGLCLIPGDSGEEILKYISGAEALDQFVDEEGVLSSLDYIVVDTGAGIGITTQAFLNAS
DCVVIVTTPDPSAITDAYACIKINSKNKDELFLIANMVAQPKEGRATYERLLKVAKNNIASLELHYLGAIENSSLLKRYV
RERKILRKIAPNDLFSQSIDQIAGLLVSKLETGALEIPKEGFKSFFKRLLSYLG
>Mature_294_residues
MNNQASRLDNLINIKNPKSFFDNKGNTKFIAITSGKGGVGKSNISANLAYALYKKGYKVGVFDADIGLANLDVIFGVKTH
KNILHALKGEAKLQEIICEIEPGLCLIPGDSGEEILKYISGAEALDQFVDEEGVLSSLDYIVVDTGAGIGITTQAFLNAS
DCVVIVTTPDPSAITDAYACIKINSKNKDELFLIANMVAQPKEGRATYERLLKVAKNNIASLELHYLGAIENSSLLKRYV
RERKILRKIAPNDLFSQSIDQIAGLLVSKLETGALEIPKEGFKSFFKRLLSYLG

Specific function: ATPase Required For The Correct Placement Of The Division Site. Cell Division Inhibitors Minc And Mind Act In Concert To Form An Inhibitor Capable Of Blocking Formation Of The Polar Z Ring Septums. Rapidly Oscillates Between The Poles Of The Cell To Dest

COG id: COG0455

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787423, Length=283, Percent_Identity=26.1484098939929, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: 300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 32006; Mature: 32006

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNQASRLDNLINIKNPKSFFDNKGNTKFIAITSGKGGVGKSNISANLAYALYKKGYKVG
CCCHHHHHHHHHCCCCCHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEE
VFDADIGLANLDVIFGVKTHKNILHALKGEAKLQEIICEIEPGLCLIPGDSGEEILKYIS
EEECCCCEEEEEEEEECHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHC
GAEALDQFVDEEGVLSSLDYIVVDTGAGIGITTQAFLNASDCVVIVTTPDPSAITDAYAC
CHHHHHHHHCCCCHHHHCCEEEEECCCCCCEEHHHHCCCCCEEEEEECCCCCHHHCCEEE
IKINSKNKDELFLIANMVAQPKEGRATYERLLKVAKNNIASLELHYLGAIENSSLLKRYV
EEECCCCCCCEEEEEHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHH
RERKILRKIAPNDLFSQSIDQIAGLLVSKLETGALEIPKEGFKSFFKRLLSYLG
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNNQASRLDNLINIKNPKSFFDNKGNTKFIAITSGKGGVGKSNISANLAYALYKKGYKVG
CCCHHHHHHHHHCCCCCHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEE
VFDADIGLANLDVIFGVKTHKNILHALKGEAKLQEIICEIEPGLCLIPGDSGEEILKYIS
EEECCCCEEEEEEEEECHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHC
GAEALDQFVDEEGVLSSLDYIVVDTGAGIGITTQAFLNASDCVVIVTTPDPSAITDAYAC
CHHHHHHHHCCCCHHHHCCEEEEECCCCCCEEHHHHCCCCCEEEEEECCCCCHHHCCEEE
IKINSKNKDELFLIANMVAQPKEGRATYERLLKVAKNNIASLELHYLGAIENSSLLKRYV
EEECCCCCCCEEEEEHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHH
RERKILRKIAPNDLFSQSIDQIAGLLVSKLETGALEIPKEGFKSFFKRLLSYLG
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7987014; 9384377 [H]