| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is folK [H]
Identifier: 188527220
GI number: 188527220
Start: 406953
End: 407441
Strand: Direct
Name: folK [H]
Synonym: HPSH_02135
Alternate gene names: 188527220
Gene position: 406953-407441 (Clockwise)
Preceding gene: 188527219
Following gene: 188527221
Centisome position: 25.3
GC content: 35.38
Gene sequence:
>489_bases ATGCGAGAGATCCTTACTAGCCGCTTTTTCCCTAGCCTTTTTAAAAAAAGGCTTGATTTTTCTAACAGGGTGGTTTTAGG GCTAGGATCTAATCTTAAAAATCCTTTGAAAATATTAAAAAATTGTTTTTTATATTTTAAAAATCATAGTAAAATCGGGA AAATTCTTTCTTCGCCTGTTTATATCAACCCGCCTTTTGGTTACACGAAGCAGCCTAACTTTTATAACGCTACGATTATC CTTAAAACATCTTTAAGTTTGCACCATTTTTTCGCTCTGGTTTTTTATATAGAAAGGCGTTTTGGGCGCCAAAGGAAGCG CGATTTTAAAGACGCTCCAAGAACTTTAGACATTGATATTATCGCTTTCAATCAAGTCATTTTAAGACAGAACGATTTGA CTTTACCTCATCCTAAATGGAGTGAAAGGGATTCGGTGTTAGTGCCGTTGGCTTTGCAACAAATTCTTTTTAAAAAAGGG GAGTGGTGA
Upstream 100 bases:
>100_bases TGGTGTTTTCTGTAGAGCCTGGGATTTATATCCCTGGGTTTTTTGGGGTGCGCATTGAAGATTTAGTGGTGATCAAAAAT TCTAGGGCTGAGCTTTTGTG
Downstream 100 bases:
>100_bases AATTCTATACCTATAGTGGGGAGACGGCCGCTGAAGCTTTAAAGATCGCTCAAAGCCACCATGGGGTGGATACGCTGGTG TTTAAAACCCAAGAAATCCG
Product: 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (folK)
Products: NA
Alternate protein names: 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase; PPPK; 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; HPPK [H]
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MREILTSRFFPSLFKKRLDFSNRVVLGLGSNLKNPLKILKNCFLYFKNHSKIGKILSSPVYINPPFGYTKQPNFYNATII LKTSLSLHHFFALVFYIERRFGRQRKRDFKDAPRTLDIDIIAFNQVILRQNDLTLPHPKWSERDSVLVPLALQQILFKKG EW
Sequences:
>Translated_162_residues MREILTSRFFPSLFKKRLDFSNRVVLGLGSNLKNPLKILKNCFLYFKNHSKIGKILSSPVYINPPFGYTKQPNFYNATII LKTSLSLHHFFALVFYIERRFGRQRKRDFKDAPRTLDIDIIAFNQVILRQNDLTLPHPKWSERDSVLVPLALQQILFKKG EW >Mature_162_residues MREILTSRFFPSLFKKRLDFSNRVVLGLGSNLKNPLKILKNCFLYFKNHSKIGKILSSPVYINPPFGYTKQPNFYNATII LKTSLSLHHFFALVFYIERRFGRQRKRDFKDAPRTLDIDIIAFNQVILRQNDLTLPHPKWSERDSVLVPLALQQILFKKG EW
Specific function: Dihydrofolate biosynthesis; first step. [C]
COG id: COG0801
COG function: function code H; 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HPPK family [H]
Homologues:
Organism=Escherichia coli, GI1786335, Length=138, Percent_Identity=31.8840579710145, Blast_Score=71, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000550 [H]
Pfam domain/function: PF01288 HPPK [H]
EC number: =2.7.6.3 [H]
Molecular weight: Translated: 19114; Mature: 19114
Theoretical pI: Translated: 11.00; Mature: 11.00
Prosite motif: PS00092 N6_MTASE ; PS00794 HPPK ; PS00228 TUBULIN_B_AUTOREG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREILTSRFFPSLFKKRLDFSNRVVLGLGSNLKNPLKILKNCFLYFKNHSKIGKILSSPV CHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCE YINPPFGYTKQPNFYNATIILKTSLSLHHFFALVFYIERRFGRQRKRDFKDAPRTLDIDI EECCCCCCCCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE IAFNQVILRQNDLTLPHPKWSERDSVLVPLALQQILFKKGEW EEHHHHEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCC >Mature Secondary Structure MREILTSRFFPSLFKKRLDFSNRVVLGLGSNLKNPLKILKNCFLYFKNHSKIGKILSSPV CHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCE YINPPFGYTKQPNFYNATIILKTSLSLHHFFALVFYIERRFGRQRKRDFKDAPRTLDIDI EECCCCCCCCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE IAFNQVILRQNDLTLPHPKWSERDSVLVPLALQQILFKKGEW EEHHHHEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]