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The map label for this gene is yqhT [H]

Identifier: 188527219

GI number: 188527219

Start: 405880

End: 406953

Strand: Direct

Name: yqhT [H]

Synonym: HPSH_02130

Alternate gene names: 188527219

Gene position: 405880-406953 (Clockwise)

Preceding gene: 188527218

Following gene: 188527220

Centisome position: 25.23

GC content: 41.9

Gene sequence:

>1074_bases
ATGAGAGAATTAGAGAGAGACGCCCATTTCACGCTTGATGAAAATGCGATGTTTTTTGAGTGCACTTATAGTTGCGATAA
CGCTTTGTTTTTGCAATTAGAGGATCGCTCGTTTTTTATCACTGATTCTCGCTACACTCAAGAAGCTAGAGAAAGCATTC
AGCCTAAAAATGGCGTTTTAGCGGAAGTGGTAGAATCTAGAGATTTAGTGCAAAGCGCGATTGATTTGATCGCTAAAAGT
TCGCTTAAAAAGCTCTTTTTTGACCCCAATCAAGTGAATTTACAAACCTACAAGCGTTTAAATTCAGCGTTTGGGGATAA
GGTTGCTTTAGAGGGCGTGCCTGGTTACCACCGCCAAAAACGCATCATTAAAAACGATCATGAAATCCAACTCCTCAAAA
AATCTCAAGCGCTGAATGTTGAGGCTTTTGAAAATTTTGCTGAGTATGTGAAAAAGGTTTTTGATGAAAAAGAGTCGTTG
AGCGAGCGGTATTTGCAGCACAAGGTTAAGGACTTTTTGACTAAAGAGGGGGTTTATGATCTGAGTTTTGAGCCTATTTT
AGCCTTGAATGCGAATGCGAGCAAGCCCCATGCCTTGCCTAGTGCGAAGGATTTTTTAAAAGCAGAGCATAGCATTCTTT
TGGATATGGGGATCAAATACGAACGCTATTGCTCTGATAGGACTCGCACGGCTTTTTTTGACCCTAAAGATTTTGTCTTC
ACAAGAGAGCAGAGTTTCAAGGATAAAGAGCGTCAAAAGATTTATGACATTGTGAAAGAAGCGCAAGAAAAGGCTATTTC
AGGCATTAGAGCGGGCATGACCGGTAAAGAAGCGGACAGCTTGGCTAGGGGAGTGATTAGCGATCATGGTTATGGGCAAT
ATTTCACTCACAGCACCGGGCATGGCATTGGCTTAGACATTCATGAGCTTCCCTATATTTCATCGCGCAGTGAAACCATT
TTAGAAGAGGGCATGGTGTTTTCTGTAGAGCCTGGGATTTATATCCCTGGGTTTTTTGGGGTGCGCATTGAAGATTTAGT
GGTGATCAAAAATTCTAGGGCTGAGCTTTTGTGA

Upstream 100 bases:

>100_bases
GCGATGGTCAATATTTTAGCCGAAATGAAAGCGTTCCAAGAAGCCCAACAAAACAACCCTAATAACCCCATTAACAACCA
AAAATAAAAGGGGGCTATTG

Downstream 100 bases:

>100_bases
TGCGAGAGATCCTTACTAGCCGCTTTTTCCCTAGCCTTTTTAAAAAAAGGCTTGATTTTTCTAACAGGGTGGTTTTAGGG
CTAGGATCTAATCTTAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MRELERDAHFTLDENAMFFECTYSCDNALFLQLEDRSFFITDSRYTQEARESIQPKNGVLAEVVESRDLVQSAIDLIAKS
SLKKLFFDPNQVNLQTYKRLNSAFGDKVALEGVPGYHRQKRIIKNDHEIQLLKKSQALNVEAFENFAEYVKKVFDEKESL
SERYLQHKVKDFLTKEGVYDLSFEPILALNANASKPHALPSAKDFLKAEHSILLDMGIKYERYCSDRTRTAFFDPKDFVF
TREQSFKDKERQKIYDIVKEAQEKAISGIRAGMTGKEADSLARGVISDHGYGQYFTHSTGHGIGLDIHELPYISSRSETI
LEEGMVFSVEPGIYIPGFFGVRIEDLVVIKNSRAELL

Sequences:

>Translated_357_residues
MRELERDAHFTLDENAMFFECTYSCDNALFLQLEDRSFFITDSRYTQEARESIQPKNGVLAEVVESRDLVQSAIDLIAKS
SLKKLFFDPNQVNLQTYKRLNSAFGDKVALEGVPGYHRQKRIIKNDHEIQLLKKSQALNVEAFENFAEYVKKVFDEKESL
SERYLQHKVKDFLTKEGVYDLSFEPILALNANASKPHALPSAKDFLKAEHSILLDMGIKYERYCSDRTRTAFFDPKDFVF
TREQSFKDKERQKIYDIVKEAQEKAISGIRAGMTGKEADSLARGVISDHGYGQYFTHSTGHGIGLDIHELPYISSRSETI
LEEGMVFSVEPGIYIPGFFGVRIEDLVVIKNSRAELL
>Mature_357_residues
MRELERDAHFTLDENAMFFECTYSCDNALFLQLEDRSFFITDSRYTQEARESIQPKNGVLAEVVESRDLVQSAIDLIAKS
SLKKLFFDPNQVNLQTYKRLNSAFGDKVALEGVPGYHRQKRIIKNDHEIQLLKKSQALNVEAFENFAEYVKKVFDEKESL
SERYLQHKVKDFLTKEGVYDLSFEPILALNANASKPHALPSAKDFLKAEHSILLDMGIKYERYCSDRTRTAFFDPKDFVF
TREQSFKDKERQKIYDIVKEAQEKAISGIRAGMTGKEADSLARGVISDHGYGQYFTHSTGHGIGLDIHELPYISSRSETI
LEEGMVFSVEPGIYIPGFFGVRIEDLVVIKNSRAELL

Specific function: Unknown

COG id: COG0006

COG function: function code E; Xaa-Pro aminopeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M24B family [H]

Homologues:

Organism=Homo sapiens, GI264681563, Length=238, Percent_Identity=27.7310924369748, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI11559925, Length=278, Percent_Identity=26.978417266187, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI93141226, Length=250, Percent_Identity=28, Blast_Score=71, Evalue=1e-12,
Organism=Escherichia coli, GI1788728, Length=324, Percent_Identity=33.0246913580247, Blast_Score=168, Evalue=5e-43,
Organism=Escherichia coli, GI1789275, Length=310, Percent_Identity=25.4838709677419, Blast_Score=79, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17509539, Length=363, Percent_Identity=25.8953168044077, Blast_Score=81, Evalue=7e-16,
Organism=Saccharomyces cerevisiae, GI6321118, Length=211, Percent_Identity=25.1184834123223, Blast_Score=66, Evalue=8e-12,
Organism=Saccharomyces cerevisiae, GI6322999, Length=364, Percent_Identity=24.7252747252747, Blast_Score=64, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000587
- InterPro:   IPR001714
- InterPro:   IPR000994
- InterPro:   IPR001131 [H]

Pfam domain/function: PF01321 Creatinase_N; PF00557 Peptidase_M24 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 40888; Mature: 40888

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: PS00491 PROLINE_PEPTIDASE ; PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRELERDAHFTLDENAMFFECTYSCDNALFLQLEDRSFFITDSRYTQEARESIQPKNGVL
CCCCCCCCCEEECCCCEEEEEEECCCCEEEEEEECCEEEEECCHHHHHHHHHCCCCCCHH
AEVVESRDLVQSAIDLIAKSSLKKLFFDPNQVNLQTYKRLNSAFGDKVALEGVPGYHRQK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEECCCCCHHHHH
RIIKNDHEIQLLKKSQALNVEAFENFAEYVKKVFDEKESLSERYLQHKVKDFLTKEGVYD
HHHCCCCCEEEEHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCC
LSFEPILALNANASKPHALPSAKDFLKAEHSILLDMGIKYERYCSDRTRTAFFDPKDFVF
CCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEECCCCHHEE
TREQSFKDKERQKIYDIVKEAQEKAISGIRAGMTGKEADSLARGVISDHGYGQYFTHSTG
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEECCCC
HGIGLDIHELPYISSRSETILEEGMVFSVEPGIYIPGFFGVRIEDLVVIKNSRAELL
CCCCCCHHHCCCCCCCHHHHHHCCCEEEECCCEEECCCCCCEEEEEEEEECCCCCCC
>Mature Secondary Structure
MRELERDAHFTLDENAMFFECTYSCDNALFLQLEDRSFFITDSRYTQEARESIQPKNGVL
CCCCCCCCCEEECCCCEEEEEEECCCCEEEEEEECCEEEEECCHHHHHHHHHCCCCCCHH
AEVVESRDLVQSAIDLIAKSSLKKLFFDPNQVNLQTYKRLNSAFGDKVALEGVPGYHRQK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEECCCCCHHHHH
RIIKNDHEIQLLKKSQALNVEAFENFAEYVKKVFDEKESLSERYLQHKVKDFLTKEGVYD
HHHCCCCCEEEEHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCC
LSFEPILALNANASKPHALPSAKDFLKAEHSILLDMGIKYERYCSDRTRTAFFDPKDFVF
CCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEECCCCHHEE
TREQSFKDKERQKIYDIVKEAQEKAISGIRAGMTGKEADSLARGVISDHGYGQYFTHSTG
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEECCCC
HGIGLDIHELPYISSRSETILEEGMVFSVEPGIYIPGFFGVRIEDLVVIKNSRAELL
CCCCCCHHHCCCCCCCHHHHHHCCCEEEECCCEEECCCCCCEEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]