| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is amiE
Identifier: 188527100
GI number: 188527100
Start: 295918
End: 296937
Strand: Direct
Name: amiE
Synonym: HPSH_01525
Alternate gene names: 188527100
Gene position: 295918-296937 (Clockwise)
Preceding gene: 188527099
Following gene: 188527102
Centisome position: 18.4
GC content: 44.8
Gene sequence:
>1020_bases ATGAGACATGGAGATATTAGTAGCAGCCCAGATACTGTGGGTGTAGCGGTAGTTAATTATAAGATGCCTAGACTCCACAC TAAGAATGAGGTGTTGGAAAATTGTCGCAATATCGCTAAGGTGATTGGTGGGGTCAAACAAGGTCTGCCCGGGTTGGATC TGATTATTTTCCCTGAATACAGCACGCATGGGATTATGTATGACAGACAAGAAATGTTTGACACAGCCGCAAGCGTTCCT GGAGAAGAAACCGCAATTCTTGCTGAGGCTTGTAAGAAAAACAAGGTTTGGGGAGTGTTCTCTTTGACGGGGGAAAAACA CGAGCAAGCTAAAAAGAATCCCTATAATACTTTGATTCTTGTCAATGATAAGGGTGAGATCGTGCAAAAATACCGCAAAA TCTTGCCTTGGTGCCCTATTGAATGCTGGTATCCTGGGGATAAAACTTATGTGGTTGATGGGCCTAAGGGCTTGAAAGTT TCTTTGATTATTTGCGATGATGGTAACTACCCTGAAATTTGGCGCGATTGTGCGATGCGTGGGGCAGAACTCATTGTGCG CTGTCAAGGTTACATGTATCCGGCTAAAGAGCAACAAATTGCGATCGTGAAAGCTATGGCGTGGGCTAATCAATGTTATG TAGCGGTAGCGAATGCGACCGGCTTTGATGGGGTGTATTCCTATTTTGGGCATTCTAGCATTATTGGTTTTGACGGGCAT ACTTTGGGCGAATGCGGGGAAGAAGAAAATGGTCTTCAATACGCTCAACTTTCTGTGCAACAAATCCGTGATGCGAGGAA ATACGACCAAAGCCAAAACCAACTCTTCAAACTTTTACACAGAGGTTATAGTGGGGTTTTTGCTAGTGGCGATGGGGATA AGGGTGTGGCGGAATGCCCTTTTGAGTTCTATAAAACTTGGGTGAATGACCCCAAAAAAGCTCAAGAAAATGTAGAAAAA TTCACTCGCCCAAGCGTGGGTGTGGCCGCTTGTCCTGTAGGCGATTTGCCCACGAAATAA
Upstream 100 bases:
>100_bases TTAAAGTTTTCATATTCATTACAGATCCATTTACACAACTATTTTATAAATTCAAATAGAGGGTTTGTAGGAACTCTCAT TAAAGAACAAGGAGTATAAC
Downstream 100 bases:
>100_bases GGGGCAAAAAGGGGGGGGGCTTTAGAGAAGCTTAAAAGCGTTTTAATATCTCTTTTTAGAACGCTTAAAAACCACCAAAA GACTACAAATATTTCGTTAA
Product: acylamide amidohydrolase
Products: NA
Alternate protein names: Acylamide amidohydrolase [H]
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MRHGDISSSPDTVGVAVVNYKMPRLHTKNEVLENCRNIAKVIGGVKQGLPGLDLIIFPEYSTHGIMYDRQEMFDTAASVP GEETAILAEACKKNKVWGVFSLTGEKHEQAKKNPYNTLILVNDKGEIVQKYRKILPWCPIECWYPGDKTYVVDGPKGLKV SLIICDDGNYPEIWRDCAMRGAELIVRCQGYMYPAKEQQIAIVKAMAWANQCYVAVANATGFDGVYSYFGHSSIIGFDGH TLGECGEEENGLQYAQLSVQQIRDARKYDQSQNQLFKLLHRGYSGVFASGDGDKGVAECPFEFYKTWVNDPKKAQENVEK FTRPSVGVAACPVGDLPTK
Sequences:
>Translated_339_residues MRHGDISSSPDTVGVAVVNYKMPRLHTKNEVLENCRNIAKVIGGVKQGLPGLDLIIFPEYSTHGIMYDRQEMFDTAASVP GEETAILAEACKKNKVWGVFSLTGEKHEQAKKNPYNTLILVNDKGEIVQKYRKILPWCPIECWYPGDKTYVVDGPKGLKV SLIICDDGNYPEIWRDCAMRGAELIVRCQGYMYPAKEQQIAIVKAMAWANQCYVAVANATGFDGVYSYFGHSSIIGFDGH TLGECGEEENGLQYAQLSVQQIRDARKYDQSQNQLFKLLHRGYSGVFASGDGDKGVAECPFEFYKTWVNDPKKAQENVEK FTRPSVGVAACPVGDLPTK >Mature_339_residues MRHGDISSSPDTVGVAVVNYKMPRLHTKNEVLENCRNIAKVIGGVKQGLPGLDLIIFPEYSTHGIMYDRQEMFDTAASVP GEETAILAEACKKNKVWGVFSLTGEKHEQAKKNPYNTLILVNDKGEIVQKYRKILPWCPIECWYPGDKTYVVDGPKGLKV SLIICDDGNYPEIWRDCAMRGAELIVRCQGYMYPAKEQQIAIVKAMAWANQCYVAVANATGFDGVYSYFGHSSIIGFDGH TLGECGEEENGLQYAQLSVQQIRDARKYDQSQNQLFKLLHRGYSGVFASGDGDKGVAECPFEFYKTWVNDPKKAQENVEK FTRPSVGVAACPVGDLPTK
Specific function: Also exhibits in vitro acyl transferase activity, transferring the acyl moiety of short-chain amides to hydroxylamine to form hydroxamates [H]
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: =3.5.1.4 [H]
Molecular weight: Translated: 37713; Mature: 37713
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHGDISSSPDTVGVAVVNYKMPRLHTKNEVLENCRNIAKVIGGVKQGLPGLDLIIFPEY CCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC STHGIMYDRQEMFDTAASVPGEETAILAEACKKNKVWGVFSLTGEKHEQAKKNPYNTLIL CCCCEEECHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEECCCHHHHHHCCCCCEEEE VNDKGEIVQKYRKILPWCPIECWYPGDKTYVVDGPKGLKVSLIICDDGNYPEIWRDCAMR ECCCHHHHHHHHHHCCCCCCEEEECCCCEEEEECCCCCEEEEEEECCCCCHHHHHHHHHC GAELIVRCQGYMYPAKEQQIAIVKAMAWANQCYVAVANATGFDGVYSYFGHSSIIGFDGH CHHEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHCCCEEEECCCC TLGECGEEENGLQYAQLSVQQIRDARKYDQSQNQLFKLLHRGYSGVFASGDGDKGVAECP CCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEECCCCCCCHHHCC FEFYKTWVNDPKKAQENVEKFTRPSVGVAACPVGDLPTK HHHHHHHCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCC >Mature Secondary Structure MRHGDISSSPDTVGVAVVNYKMPRLHTKNEVLENCRNIAKVIGGVKQGLPGLDLIIFPEY CCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC STHGIMYDRQEMFDTAASVPGEETAILAEACKKNKVWGVFSLTGEKHEQAKKNPYNTLIL CCCCEEECHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEECCCHHHHHHCCCCCEEEE VNDKGEIVQKYRKILPWCPIECWYPGDKTYVVDGPKGLKVSLIICDDGNYPEIWRDCAMR ECCCHHHHHHHHHHCCCCCCEEEECCCCEEEEECCCCCEEEEEEECCCCCHHHHHHHHHC GAELIVRCQGYMYPAKEQQIAIVKAMAWANQCYVAVANATGFDGVYSYFGHSSIIGFDGH CHHEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHCCCEEEECCCC TLGECGEEENGLQYAQLSVQQIRDARKYDQSQNQLFKLLHRGYSGVFASGDGDKGVAECP CCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEECCCCCCCHHHCC FEFYKTWVNDPKKAQENVEKFTRPSVGVAACPVGDLPTK HHHHHHHCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA