| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is ddg [C]
Identifier: 188527086
GI number: 188527086
Start: 272702
End: 273688
Strand: Direct
Name: ddg [C]
Synonym: HPSH_01455
Alternate gene names: 188527086
Gene position: 272702-273688 (Clockwise)
Preceding gene: 188527085
Following gene: 188527088
Centisome position: 16.95
GC content: 39.61
Gene sequence:
>987_bases ATGACTTATAAAGAACGACTCATACACGAAAAAATATTGAACCAAGACGATAAGGGTTTTAAAACAGAACTGCACATTTT GAGTATTTTTATCGTGGAATCTTTGGTGAATATTTTGGGGTTTATTTTAGCTAAAATGCCCCATTCGTGGTTTTTAAGGT GCATTAAAGCTGTGGCGTGGCTCATGAAAACTTTTGATAGGCGCCGTTACTTTGACGCTAAAGCCAATTTGGATTTTGTG TTTGGGGATTCTAAAAGCGAAGAAGAGAAAAAAAGGATTATTAAAAAGGGTTATGAAAATTTTGCTTTTATTCTTTTAGA AACCATTAGAGTGATCTTTATCCCTAAAGATGAATACGACGCTCGCTTCACGCTCATCAATGAAGAAAATGTGTGGAAGT CTTTAAACAAGGAAGGCCAAGCGATCACTTTATGCATGCATTTTGGCTATTGGGAAGCGGTAGGCACGACTTTAGCGCAA TATTATAAGGACTATGGTAGGGGGTGCTTGGGGCGTTTGACTAAATTTGCCCCCATCAATCACATGATCATGGGTAGGCG AGAGGCGTTTGGGGTGCGTTTTGTCAATAAAGTGGGAGCGATGAAAGAACTCATTAAAATGTATAATCAAGGCAATGGTC TTGTAGGGATTTTAGTGGATCAAAATGTTGCGCCTAAAGATGGGGTGGTGGTGAAATTCTTCAATAAAGACGCTACGCAC ACCACGATCGCTTCTATTTTATCGCGCCGTTACAATATAGACATTCAGCCGGTATTCATTGATTTTAATGACGATTATTC GCATTACACAGCGACCTATTACCCGAGTATGCGCTCTAAAATCACCGATAACGCTGAGAACGATATTTTAGAATGCACGC AAGCCCAAGCGAGTTTGTGTGAAGAAGTGATTAAAAACCACCCGGAAAGTTATTTTTGGTTCCACAGGCGTTTTAAAAGC ACCCATCCTGAGATTTATCAAAGATAG
Upstream 100 bases:
>100_bases GTAATTCAAACGCCAACTACCATAAAAAGGATTTTTCTATCCAAAACATAGATCCTAAAAAAATTAAAGAATGCGTTTTA AACATTTTAAAGGAAAAAGA
Downstream 100 bases:
>100_bases GGTTTTGTTTTAATTAAAAATTAAAAACTAAAGCCTTATTTGAAGAAAAACTCATTCAATGAGAGCGGGAGTGGTATTTC TTTAAAAATTCTTTTTTAAA
Product: lipid A biosynthesis lauroyl acyltransferase
Products: NA
Alternate protein names: Lipid A Biosynthesis Lauroyl Acyltransferase; Lipid A Biosynthesis Lauroyl/Myristoyl Acyltransferase
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MTYKERLIHEKILNQDDKGFKTELHILSIFIVESLVNILGFILAKMPHSWFLRCIKAVAWLMKTFDRRRYFDAKANLDFV FGDSKSEEEKKRIIKKGYENFAFILLETIRVIFIPKDEYDARFTLINEENVWKSLNKEGQAITLCMHFGYWEAVGTTLAQ YYKDYGRGCLGRLTKFAPINHMIMGRREAFGVRFVNKVGAMKELIKMYNQGNGLVGILVDQNVAPKDGVVVKFFNKDATH TTIASILSRRYNIDIQPVFIDFNDDYSHYTATYYPSMRSKITDNAENDILECTQAQASLCEEVIKNHPESYFWFHRRFKS THPEIYQR
Sequences:
>Translated_328_residues MTYKERLIHEKILNQDDKGFKTELHILSIFIVESLVNILGFILAKMPHSWFLRCIKAVAWLMKTFDRRRYFDAKANLDFV FGDSKSEEEKKRIIKKGYENFAFILLETIRVIFIPKDEYDARFTLINEENVWKSLNKEGQAITLCMHFGYWEAVGTTLAQ YYKDYGRGCLGRLTKFAPINHMIMGRREAFGVRFVNKVGAMKELIKMYNQGNGLVGILVDQNVAPKDGVVVKFFNKDATH TTIASILSRRYNIDIQPVFIDFNDDYSHYTATYYPSMRSKITDNAENDILECTQAQASLCEEVIKNHPESYFWFHRRFKS THPEIYQR >Mature_327_residues TYKERLIHEKILNQDDKGFKTELHILSIFIVESLVNILGFILAKMPHSWFLRCIKAVAWLMKTFDRRRYFDAKANLDFVF GDSKSEEEKKRIIKKGYENFAFILLETIRVIFIPKDEYDARFTLINEENVWKSLNKEGQAITLCMHFGYWEAVGTTLAQY YKDYGRGCLGRLTKFAPINHMIMGRREAFGVRFVNKVGAMKELIKMYNQGNGLVGILVDQNVAPKDGVVVKFFNKDATHT TIASILSRRYNIDIQPVFIDFNDDYSHYTATYYPSMRSKITDNAENDILECTQAQASLCEEVIKNHPESYFWFHRRFKST HPEIYQR
Specific function: Unknown
COG id: COG1560
COG function: function code M; Lauroyl/myristoyl acyltransferase
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082094, Length=272, Percent_Identity=24.6323529411765, Blast_Score=69, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.-
Molecular weight: Translated: 38449; Mature: 38318
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYKERLIHEKILNQDDKGFKTELHILSIFIVESLVNILGFILAKMPHSWFLRCIKAVAW CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LMKTFDRRRYFDAKANLDFVFGDSKSEEEKKRIIKKGYENFAFILLETIRVIFIPKDEYD HHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCHHHHHHHHHHHHHEEEEECCCCC ARFTLINEENVWKSLNKEGQAITLCMHFGYWEAVGTTLAQYYKDYGRGCLGRLTKFAPIN CEEEEECCHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHH HMIMGRREAFGVRFVNKVGAMKELIKMYNQGNGLVGILVDQNVAPKDGVVVKFFNKDATH HHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEEECCCCHH TTIASILSRRYNIDIQPVFIDFNDDYSHYTATYYPSMRSKITDNAENDILECTQAQASLC HHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEECCHHHHHHCCCCCHHHHHHHHHHHHHH EEVIKNHPESYFWFHRRFKSTHPEIYQR HHHHHCCCCHHHHHHHHHCCCCHHHHCC >Mature Secondary Structure TYKERLIHEKILNQDDKGFKTELHILSIFIVESLVNILGFILAKMPHSWFLRCIKAVAW CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LMKTFDRRRYFDAKANLDFVFGDSKSEEEKKRIIKKGYENFAFILLETIRVIFIPKDEYD HHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCHHHHHHHHHHHHHEEEEECCCCC ARFTLINEENVWKSLNKEGQAITLCMHFGYWEAVGTTLAQYYKDYGRGCLGRLTKFAPIN CEEEEECCHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHH HMIMGRREAFGVRFVNKVGAMKELIKMYNQGNGLVGILVDQNVAPKDGVVVKFFNKDATH HHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEEECCCCHH TTIASILSRRYNIDIQPVFIDFNDDYSHYTATYYPSMRSKITDNAENDILECTQAQASLC HHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEECCHHHHHHCCCCCHHHHHHHHHHHHHH EEVIKNHPESYFWFHRRFKSTHPEIYQR HHHHHCCCCHHHHHHHHHCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA