Definition Clostridium botulinum B str. Eklund 17B, complete genome.
Accession NC_010674
Length 3,800,327

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The map label for this gene is 187935211

Identifier: 187935211

GI number: 187935211

Start: 1594145

End: 1595074

Strand: Reverse

Name: 187935211

Synonym: CLL_A1535

Alternate gene names: NA

Gene position: 1595074-1594145 (Counterclockwise)

Preceding gene: 187935519

Following gene: 187932854

Centisome position: 41.97

GC content: 28.49

Gene sequence:

>930_bases
ATGGATATTAAACAAATTTCTAATATATTGCTAGAAATATTTTATATCATGTTAGGTCTATACATGGCCATTACGATGAT
ATTTACTTTAAAAGACAAAAATCATAAAACTAGAATTGGTACTGCTCTATTCTGGGGAATAATATCTTTAATTTTTATAT
TTGGTAAAATAATACCATCTATTGTTACTGGTATTCTTATTGTAGTAATTGCTTTATTATCAGCATTCAAGCAAATTAAT
ATTGGTACATTAAAACAATTAGATGATACATTTACTAATTTAAAAGCAGAACAATTAGGATTAAAAATATTTGTACCATC
ATTGACAATTGCTATAATTGCAATGATTATTGCTTCATTTACTCCTTTATCAGGAACAGTTGCTATAGGTATATCATCTA
CTTCAGCTTTACTTATTACATTTATTCTTACTAAAGCTAAACCTATTGAATTTGTTGAAGATAGTAATAGAATGTTCCAA
TCAGTAGGTGTATTTGCAATATTACCTCAACTTTTAGCTTCTCTAGGTGCTTTATTTACTGTTGCTGGAGTTGGTGATAT
AATATCTAACATTATTTCTGGAGTTATACCTCAAAATAATCCTTTAGCTGGAGTTATTGCTTATTGCTTAGGTATGGCTA
TATTTACAGCAATAATGGGAAATGGATTTGCAGCATTTTCAGTTATAACTGTTGGTATTGGTGTACCTTTTGTATTTGCT
CAAGGTGGAGATCCTGTAATATGTTCAGCACTTGCTTTAACAGCTGGATTCTGTGGAACATTATTAACTCCAATGGCTGC
TAATTTTAACATGTTACCAGCTGCATTATTAGAAATAAAAGATAAAAATGCAGTAATAAAAGCTCAAGCACCATTAGCCT
TAATTTTATTATTAGTACATATAATTCTTATGTATACATTAGGATTTTAA

Upstream 100 bases:

>100_bases
AGTTGCATTTATTTTGTGTATAATACAAAACTATCTTTTAGACAAAAGCCTAAAGAAAAAATATAGTTCTAAAAATCAAT
AATTATGGAGGAAATGCTAA

Downstream 100 bases:

>100_bases
TTAATAGATGTTTTACATGGTATGATATATTTATAAGTAACTTTTACAAAGTGATTTTACAATGTATATACTTTTTTAGA
TTATTTTCGTATTGTAAAAT

Product: permease

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MDIKQISNILLEIFYIMLGLYMAITMIFTLKDKNHKTRIGTALFWGIISLIFIFGKIIPSIVTGILIVVIALLSAFKQIN
IGTLKQLDDTFTNLKAEQLGLKIFVPSLTIAIIAMIIASFTPLSGTVAIGISSTSALLITFILTKAKPIEFVEDSNRMFQ
SVGVFAILPQLLASLGALFTVAGVGDIISNIISGVIPQNNPLAGVIAYCLGMAIFTAIMGNGFAAFSVITVGIGVPFVFA
QGGDPVICSALALTAGFCGTLLTPMAANFNMLPAALLEIKDKNAVIKAQAPLALILLLVHIILMYTLGF

Sequences:

>Translated_309_residues
MDIKQISNILLEIFYIMLGLYMAITMIFTLKDKNHKTRIGTALFWGIISLIFIFGKIIPSIVTGILIVVIALLSAFKQIN
IGTLKQLDDTFTNLKAEQLGLKIFVPSLTIAIIAMIIASFTPLSGTVAIGISSTSALLITFILTKAKPIEFVEDSNRMFQ
SVGVFAILPQLLASLGALFTVAGVGDIISNIISGVIPQNNPLAGVIAYCLGMAIFTAIMGNGFAAFSVITVGIGVPFVFA
QGGDPVICSALALTAGFCGTLLTPMAANFNMLPAALLEIKDKNAVIKAQAPLALILLLVHIILMYTLGF
>Mature_309_residues
MDIKQISNILLEIFYIMLGLYMAITMIFTLKDKNHKTRIGTALFWGIISLIFIFGKIIPSIVTGILIVVIALLSAFKQIN
IGTLKQLDDTFTNLKAEQLGLKIFVPSLTIAIIAMIIASFTPLSGTVAIGISSTSALLITFILTKAKPIEFVEDSNRMFQ
SVGVFAILPQLLASLGALFTVAGVGDIISNIISGVIPQNNPLAGVIAYCLGMAIFTAIMGNGFAAFSVITVGIGVPFVFA
QGGDPVICSALALTAGFCGTLLTPMAANFNMLPAALLEIKDKNAVIKAQAPLALILLLVHIILMYTLGF

Specific function: Unknown

COG id: COG3817

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32813; Mature: 32813

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: PS00012 PHOSPHOPANTETHEINE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIKQISNILLEIFYIMLGLYMAITMIFTLKDKNHKTRIGTALFWGIISLIFIFGKIIPS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IVTGILIVVIALLSAFKQINIGTLKQLDDTFTNLKAEQLGLKIFVPSLTIAIIAMIIASF
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHCHHEEHHHHHHHHHHHHHHHC
TPLSGTVAIGISSTSALLITFILTKAKPIEFVEDSNRMFQSVGVFAILPQLLASLGALFT
CCCCCEEEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAGVGDIISNIISGVIPQNNPLAGVIAYCLGMAIFTAIMGNGFAAFSVITVGIGVPFVFA
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEE
QGGDPVICSALALTAGFCGTLLTPMAANFNMLPAALLEIKDKNAVIKAQAPLALILLLVH
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEECCHHHHHHHHHH
IILMYTLGF
HHHHHHHCC
>Mature Secondary Structure
MDIKQISNILLEIFYIMLGLYMAITMIFTLKDKNHKTRIGTALFWGIISLIFIFGKIIPS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IVTGILIVVIALLSAFKQINIGTLKQLDDTFTNLKAEQLGLKIFVPSLTIAIIAMIIASF
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHCHHEEHHHHHHHHHHHHHHHC
TPLSGTVAIGISSTSALLITFILTKAKPIEFVEDSNRMFQSVGVFAILPQLLASLGALFT
CCCCCEEEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAGVGDIISNIISGVIPQNNPLAGVIAYCLGMAIFTAIMGNGFAAFSVITVGIGVPFVFA
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEE
QGGDPVICSALALTAGFCGTLLTPMAANFNMLPAALLEIKDKNAVIKAQAPLALILLLVH
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEECCHHHHHHHHHH
IILMYTLGF
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA