| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
Click here to switch to the map view.
The map label for this gene is yeiH [C]
Identifier: 187935144
GI number: 187935144
Start: 2766590
End: 2767600
Strand: Reverse
Name: yeiH [C]
Synonym: CLL_A2650
Alternate gene names: 187935144
Gene position: 2767600-2766590 (Counterclockwise)
Preceding gene: 187933908
Following gene: 187933271
Centisome position: 72.83
GC content: 26.81
Gene sequence:
>1011_bases ATGAAACAAAAAATAATAGATATTATCCCAGGACTTTTAATATGTATAGTTATAGCAATACTCGGAAAAATATTAGGTAG CTTTTTTCCATCAATTGGTGGAGCAAGTTTTGCAATTATATTAGGGATTATTTTAGGAAATACAGTATTTAATAAATCTA AATATGACAAAGGATCTCAGTTTTCAGAAAAAGATCTTTTATCATATTCAATAGTACTTATGGGATCAACTATAAGTTTT ATGGAAATAAAATCACTTGGATTTAATGGCGTTTTATTTATAGCAATCCAAATGACTTTAACAATATTACTTACATATTT TGTTGGAAAAAAATTAGGTTTTTCTAAAAAATACTCATTACTTATGGCATCAGGAAATGCAGTTTGTGGATCATCAGCAA TAGCAGCAGTAGCACCAACAATAAATGCAGATTCTAAAGATAAAGCTATTTCAGTAACTATTGTAAATTTAACTGGTACA ATATTAATGTTTGTAATTCCATTAATTACAATGGCAGTATACAAAAATAGTTTAACAGAAACATCAGCTATGATTGGTGG AACTTTACAATCAGTAGGTCAAGTAATAGCATCAGCTAAGTTTATAAATGAAGATGTTGTTACATTAGCTACTATATTTA AGATAATAAGAATAATATTTTTAGTAGTTGTTGTTATAATTTTTTCAAGATTTAAAGTTGATGAAAATGAGGATATGTCA GAAAAGGCTATAGTTGAAAGAGAAAAGAAAGCTAAAGTTAGTGTGCCTTGGTACATAATAGGGTTCTTCATCTTTTGTAT AATAAATAGTTTAGGACTTGTACCAACTTCAATTCAAAAATTATTTAAATTAATAAGCAGTAATTTTGAAATCATTGCAT TAGCTGCAATTGGTATGAGAGTTAAGTTTGAAGACTTAATAAAAGAAGGACCAAAATCAATGATGTATGGATTAATGGTT GGAAGTTTCCAAATAATCTTTGCTCTTACATTAATAAAATTTATTCTTTAA
Upstream 100 bases:
>100_bases TCATATTATAATAAGTATTTCATTTTCAATATCAAATTTAATATAATTAACTCAAGAAAAAGAAAACTGTTAAAAAACAG CGATTTAGAGGTGATTGTTA
Downstream 100 bases:
>100_bases GAAGATCAGCCCCATTATAAAGTTGTATATATAATGTCAATAATGTATAATATGTATAAAATTTCTTTAGAGAAAAGGGT TAAAAATACTATGAAAAATT
Product: membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MKQKIIDIIPGLLICIVIAILGKILGSFFPSIGGASFAIILGIILGNTVFNKSKYDKGSQFSEKDLLSYSIVLMGSTISF MEIKSLGFNGVLFIAIQMTLTILLTYFVGKKLGFSKKYSLLMASGNAVCGSSAIAAVAPTINADSKDKAISVTIVNLTGT ILMFVIPLITMAVYKNSLTETSAMIGGTLQSVGQVIASAKFINEDVVTLATIFKIIRIIFLVVVVIIFSRFKVDENEDMS EKAIVEREKKAKVSVPWYIIGFFIFCIINSLGLVPTSIQKLFKLISSNFEIIALAAIGMRVKFEDLIKEGPKSMMYGLMV GSFQIIFALTLIKFIL
Sequences:
>Translated_336_residues MKQKIIDIIPGLLICIVIAILGKILGSFFPSIGGASFAIILGIILGNTVFNKSKYDKGSQFSEKDLLSYSIVLMGSTISF MEIKSLGFNGVLFIAIQMTLTILLTYFVGKKLGFSKKYSLLMASGNAVCGSSAIAAVAPTINADSKDKAISVTIVNLTGT ILMFVIPLITMAVYKNSLTETSAMIGGTLQSVGQVIASAKFINEDVVTLATIFKIIRIIFLVVVVIIFSRFKVDENEDMS EKAIVEREKKAKVSVPWYIIGFFIFCIINSLGLVPTSIQKLFKLISSNFEIIALAAIGMRVKFEDLIKEGPKSMMYGLMV GSFQIIFALTLIKFIL >Mature_336_residues MKQKIIDIIPGLLICIVIAILGKILGSFFPSIGGASFAIILGIILGNTVFNKSKYDKGSQFSEKDLLSYSIVLMGSTISF MEIKSLGFNGVLFIAIQMTLTILLTYFVGKKLGFSKKYSLLMASGNAVCGSSAIAAVAPTINADSKDKAISVTIVNLTGT ILMFVIPLITMAVYKNSLTETSAMIGGTLQSVGQVIASAKFINEDVVTLATIFKIIRIIFLVVVVIIFSRFKVDENEDMS EKAIVEREKKAKVSVPWYIIGFFIFCIINSLGLVPTSIQKLFKLISSNFEIIALAAIGMRVKFEDLIKEGPKSMMYGLMV GSFQIIFALTLIKFIL
Specific function: Unknown
COG id: COG2855
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0324 family [H]
Homologues:
Organism=Escherichia coli, GI1788482, Length=335, Percent_Identity=28.955223880597, Blast_Score=143, Evalue=2e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018383 [H]
Pfam domain/function: PF03601 Cons_hypoth698 [H]
EC number: NA
Molecular weight: Translated: 36574; Mature: 36574
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQKIIDIIPGLLICIVIAILGKILGSFFPSIGGASFAIILGIILGNTVFNKSKYDKGSQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC FSEKDLLSYSIVLMGSTISFMEIKSLGFNGVLFIAIQMTLTILLTYFVGKKLGFSKKYSL CCHHHHHHHHHHEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEE LMASGNAVCGSSAIAAVAPTINADSKDKAISVTIVNLTGTILMFVIPLITMAVYKNSLTE EEECCCCCCCCCHHHHHCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH TSAMIGGTLQSVGQVIASAKFINEDVVTLATIFKIIRIIFLVVVVIIFSRFKVDENEDMS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH EKAIVEREKKAKVSVPWYIIGFFIFCIINSLGLVPTSIQKLFKLISSNFEIIALAAIGMR HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEHHCCC VKFEDLIKEGPKSMMYGLMVGSFQIIFALTLIKFIL CHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MKQKIIDIIPGLLICIVIAILGKILGSFFPSIGGASFAIILGIILGNTVFNKSKYDKGSQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC FSEKDLLSYSIVLMGSTISFMEIKSLGFNGVLFIAIQMTLTILLTYFVGKKLGFSKKYSL CCHHHHHHHHHHEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEE LMASGNAVCGSSAIAAVAPTINADSKDKAISVTIVNLTGTILMFVIPLITMAVYKNSLTE EEECCCCCCCCCHHHHHCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH TSAMIGGTLQSVGQVIASAKFINEDVVTLATIFKIIRIIFLVVVVIIFSRFKVDENEDMS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH EKAIVEREKKAKVSVPWYIIGFFIFCIINSLGLVPTSIQKLFKLISSNFEIIALAAIGMR HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEHHCCC VKFEDLIKEGPKSMMYGLMVGSFQIIFALTLIKFIL CHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11792842 [H]