| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is pyrE [H]
Identifier: 187934364
GI number: 187934364
Start: 2685913
End: 2686587
Strand: Reverse
Name: pyrE [H]
Synonym: CLL_A2575
Alternate gene names: 187934364
Gene position: 2686587-2685913 (Counterclockwise)
Preceding gene: 187933348
Following gene: 187933107
Centisome position: 70.69
GC content: 28.89
Gene sequence:
>675_bases ATGGAAGCATATAAAAAAGAGTTTATTGAATTTATGATAGAGTGTGGAGTTTTAACTTTTGGAGATTTTGTAACTAAGAG TGGTAGAAATACACCTTTCTTTGTTAATACAGGAAATTATAAGACAGGAAGTCAATTAAAAAGATTAGGTGAATATTATG CTGAAGCTATAAAGGCAAATTATAAAGATGATTATAATATAGTGTTTGGCCCAGCATATAAGGGAATCCCTTTAAGTGTT ACAGTTACAATGGCTTTAAGTGATAAGTACGGAATAGATGTAAGTTATTGTTCAAATAGAAAAGAGATTAAGGATCATGG TGATACAGGAATACTTCTTGGAAGTAAATTAAATGATGGAGATAAGGTTTTAATAGTAGAGGATGTAACTACATCAGGAA AATCTATTTATGAAACAATGCCAATTATAAAAGAACAAGGAAATGTAGATGTAGTAGGACTTGTTATATCTGTTAATAGA ATGGAAAAAGGACAAGGAGAAAAATCAGCATTAGTAGAATTAGAAGAAAAGTATGGTTTTAAATCTTGCGCAATAGTTAC AATGACTGAAGTTGTAAAGTATTTGTATAATAAAGAAGTTAACGGAAAAGTAATAATTAATGATGAGGTTAAAACTAGAA TAGATGAATATTACAAAGAATATGGTGCTAAGTAG
Upstream 100 bases:
>100_bases TTTAGTATTCCTAAGTTCAATTACTCAGTCCACTTTGCTTATGCATATATAAACACTAGCATATATTAAAATACATTGTG AATATTGGGAGGAATAGAAA
Downstream 100 bases:
>100_bases ATTAGATTTTTAGAATTTTTGAGGTGAGTTTAAGGTTTTTAGTTCGATATTTGAAGTTTGATTTTTATAGAAGTTACTAT GTATAATATTAATAAGAAAA
Product: orotate phosphoribosyltransferase
Products: NA
Alternate protein names: OPRT; OPRTase [H]
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MEAYKKEFIEFMIECGVLTFGDFVTKSGRNTPFFVNTGNYKTGSQLKRLGEYYAEAIKANYKDDYNIVFGPAYKGIPLSV TVTMALSDKYGIDVSYCSNRKEIKDHGDTGILLGSKLNDGDKVLIVEDVTTSGKSIYETMPIIKEQGNVDVVGLVISVNR MEKGQGEKSALVELEEKYGFKSCAIVTMTEVVKYLYNKEVNGKVIINDEVKTRIDEYYKEYGAK
Sequences:
>Translated_224_residues MEAYKKEFIEFMIECGVLTFGDFVTKSGRNTPFFVNTGNYKTGSQLKRLGEYYAEAIKANYKDDYNIVFGPAYKGIPLSV TVTMALSDKYGIDVSYCSNRKEIKDHGDTGILLGSKLNDGDKVLIVEDVTTSGKSIYETMPIIKEQGNVDVVGLVISVNR MEKGQGEKSALVELEEKYGFKSCAIVTMTEVVKYLYNKEVNGKVIINDEVKTRIDEYYKEYGAK >Mature_224_residues MEAYKKEFIEFMIECGVLTFGDFVTKSGRNTPFFVNTGNYKTGSQLKRLGEYYAEAIKANYKDDYNIVFGPAYKGIPLSV TVTMALSDKYGIDVSYCSNRKEIKDHGDTGILLGSKLNDGDKVLIVEDVTTSGKSIYETMPIIKEQGNVDVVGLVISVNR MEKGQGEKSALVELEEKYGFKSCAIVTMTEVVKYLYNKEVNGKVIINDEVKTRIDEYYKEYGAK
Specific function: Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) [H]
COG id: COG0461
COG function: function code F; Orotate phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrE subfamily [H]
Homologues:
Organism=Homo sapiens, GI4507835, Length=202, Percent_Identity=23.7623762376238, Blast_Score=66, Evalue=2e-11, Organism=Escherichia coli, GI1790073, Length=198, Percent_Identity=43.9393939393939, Blast_Score=181, Evalue=2e-47, Organism=Saccharomyces cerevisiae, GI6323530, Length=231, Percent_Identity=38.5281385281385, Blast_Score=150, Evalue=2e-37, Organism=Saccharomyces cerevisiae, GI6323927, Length=230, Percent_Identity=36.9565217391304, Blast_Score=145, Evalue=6e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004467 - InterPro: IPR023031 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.10 [H]
Molecular weight: Translated: 25120; Mature: 25120
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAYKKEFIEFMIECGVLTFGDFVTKSGRNTPFFVNTGNYKTGSQLKRLGEYYAEAIKAN CCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCC YKDDYNIVFGPAYKGIPLSVTVTMALSDKYGIDVSYCSNRKEIKDHGDTGILLGSKLNDG CCCCCEEEECCCCCCCEEEEEEEEEECCCCCCEEHCCCCCHHHHHCCCCEEEEECCCCCC DKVLIVEDVTTSGKSIYETMPIIKEQGNVDVVGLVISVNRMEKGQGEKSALVELEEKYGF CEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEEEEEHHCCCCCCHHHHHHHHHHCCC KSCAIVTMTEVVKYLYNKEVNGKVIINDEVKTRIDEYYKEYGAK CHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHCCC >Mature Secondary Structure MEAYKKEFIEFMIECGVLTFGDFVTKSGRNTPFFVNTGNYKTGSQLKRLGEYYAEAIKAN CCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCC YKDDYNIVFGPAYKGIPLSVTVTMALSDKYGIDVSYCSNRKEIKDHGDTGILLGSKLNDG CCCCCEEEECCCCCCCEEEEEEEEEECCCCCCEEHCCCCCHHHHHCCCCEEEEECCCCCC DKVLIVEDVTTSGKSIYETMPIIKEQGNVDVVGLVISVNRMEKGQGEKSALVELEEKYGF CEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEEEEEHHCCCCCCHHHHHHHHHHCCC KSCAIVTMTEVVKYLYNKEVNGKVIINDEVKTRIDEYYKEYGAK CHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA