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The map label for this gene is yjbJ [H]

Identifier: 187934284

GI number: 187934284

Start: 2757948

End: 2758514

Strand: Reverse

Name: yjbJ [H]

Synonym: CLL_A2643

Alternate gene names: 187934284

Gene position: 2758514-2757948 (Counterclockwise)

Preceding gene: 187934279

Following gene: 187933543

Centisome position: 72.59

GC content: 27.16

Gene sequence:

>567_bases
ATGAAATCTAAGAAAAATAAATTTCTTATATTAGGGGTAATAATAATAGTAGCTATGGCTATTGGATCTAAATATTTAAT
AAAAGAAGTCTTTTTTCCTTATAAATATAAAGAGTATGTAAATAAATATAGTGAAGAATACAATTTAGATCCATTTTTTG
TATTGTCAGTTATGAAAACAGAAAGTAATTTTGATAGGAAAGCTGCATCTAATAAAAATGCAATTGGCCTAATGCAAATT
ACTTTAGAAACTGGAGAATGGGCAGCAGAAAAAATGGAGCTCGAAGAGTTTTCTAAGGAAAAATTACTTGATGAAGAATA
TAATATAAGGATGGGCTGTTGGTATTTAAACGAGCTTAGAGAAATGTTTGATGGAAATTTAGCATCAATAATAGCAGGAT
ATAATGCAGGTCCAGGTAATGTTAATAAATGGCTTAATGATTCAAAGCTTTCAGAGAACGGCAAGGATTTAAGTTATATA
CCATTTAATGAAACTAAGAAGTATTTAGACAAAGTAACTACTTATTATAACGTTTATAAATATCTATATTCTAATTCAAA
AAAGTGA

Upstream 100 bases:

>100_bases
AAAATTTAGAAATCGTTACTTTAAGAGCAAGCAACTGTTATAGTATAAATTATTATAGGAGCTGGCTATGAGATAAATAA
TATTAAGTAAGGAGAAAGTA

Downstream 100 bases:

>100_bases
GAACAAAAATATTAGGATATAGCTAAAAAGATGAGGGTAAAATGAAGAAGAAAATTACTTTAATTTTAGCAATATTAATA
GTAGGCATTATAATTTATTA

Product: transglycosylase, SLT family

Products: 1,6-Anhydrobond [C]

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MKSKKNKFLILGVIIIVAMAIGSKYLIKEVFFPYKYKEYVNKYSEEYNLDPFFVLSVMKTESNFDRKAASNKNAIGLMQI
TLETGEWAAEKMELEEFSKEKLLDEEYNIRMGCWYLNELREMFDGNLASIIAGYNAGPGNVNKWLNDSKLSENGKDLSYI
PFNETKKYLDKVTTYYNVYKYLYSNSKK

Sequences:

>Translated_188_residues
MKSKKNKFLILGVIIIVAMAIGSKYLIKEVFFPYKYKEYVNKYSEEYNLDPFFVLSVMKTESNFDRKAASNKNAIGLMQI
TLETGEWAAEKMELEEFSKEKLLDEEYNIRMGCWYLNELREMFDGNLASIIAGYNAGPGNVNKWLNDSKLSENGKDLSYI
PFNETKKYLDKVTTYYNVYKYLYSNSKK
>Mature_188_residues
MKSKKNKFLILGVIIIVAMAIGSKYLIKEVFFPYKYKEYVNKYSEEYNLDPFFVLSVMKTESNFDRKAASNKNAIGLMQI
TLETGEWAAEKMELEEFSKEKLLDEEYNIRMGCWYLNELREMFDGNLASIIAGYNAGPGNVNKWLNDSKLSENGKDLSYI
PFNETKKYLDKVTTYYNVYKYLYSNSKK

Specific function: Murein-Degrading Enzyme. Catalyzes The Cleavage Of The Glycosidic Bonds Between N-Acetylmuramic Acid And N- Acetylglucosamine Residues In Peptidoglycan. May Play A Role In Recycling Of Muropeptides During Cell Elongation And/Or Cell Division. [C]

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Periplasmic Protein. Tightly Associated With The Murein Sacculus [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transglycosylase slt family [H]

Homologues:

Organism=Escherichia coli, GI87082441, Length=153, Percent_Identity=31.3725490196078, Blast_Score=77, Evalue=5e-16,
Organism=Escherichia coli, GI87082191, Length=201, Percent_Identity=26.3681592039801, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008258
- InterPro:   IPR000189 [H]

Pfam domain/function: PF01464 SLT [H]

EC number: 3.2.1.- [C]

Molecular weight: Translated: 21971; Mature: 21971

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSKKNKFLILGVIIIVAMAIGSKYLIKEVFFPYKYKEYVNKYSEEYNLDPFFVLSVMKT
CCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHH
ESNFDRKAASNKNAIGLMQITLETGEWAAEKMELEEFSKEKLLDEEYNIRMGCWYLNELR
CCCCHHHHCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHH
EMFDGNLASIIAGYNAGPGNVNKWLNDSKLSENGKDLSYIPFNETKKYLDKVTTYYNVYK
HHHCCCHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHH
YLYSNSKK
HHHCCCCC
>Mature Secondary Structure
MKSKKNKFLILGVIIIVAMAIGSKYLIKEVFFPYKYKEYVNKYSEEYNLDPFFVLSVMKT
CCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHH
ESNFDRKAASNKNAIGLMQITLETGEWAAEKMELEEFSKEKLLDEEYNIRMGCWYLNELR
CCCCHHHHCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHH
EMFDGNLASIIAGYNAGPGNVNKWLNDSKLSENGKDLSYIPFNETKKYLDKVTTYYNVYK
HHHCCCHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHH
YLYSNSKK
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Muramic Acid Residue (N-Acetylmuramic Acid And N-Acetylglucosamine Residues) [C]

Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond Between N-Acetylmuramic Acid And N-Acetylglucosamine Residues, Thereby Conserving The Energy In A Newly Synthesized 1,6-Anhydrobond In The Muramic Acid Residue. [C]

General reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]