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The map label for this gene is ydaJ [H]

Identifier: 187933543

GI number: 187933543

Start: 2756791

End: 2757906

Strand: Reverse

Name: ydaJ [H]

Synonym: CLL_A2642

Alternate gene names: 187933543

Gene position: 2757906-2756791 (Counterclockwise)

Preceding gene: 187934284

Following gene: 187935391

Centisome position: 72.57

GC content: 25.81

Gene sequence:

>1116_bases
ATGAAGAAGAAAATTACTTTAATTTTAGCAATATTAATAGTAGGCATTATAATTTATTATAATGCAGCACCATACTTTAG
AAATGTAGAAACCGATAAAGTTTGGCTGCAATTAGATACATGTGATGAAGAAAAATTATTACTAGACTTTATAAATAATA
AATTAATGGATGAAGAAGGGGGAGTATATACTAATTATATAAACTCTGATTCACAAGGTGATATAACGAAAGGGCACGCT
GTATTATCAGAATCACAAGGAATAATGTTATTATATAGTCTAGAGAAAAATGATAGAATAACATTTGATAGAACTTTAGA
TTATATAAGAAATTATATGGTATTAAAAAATAATCTTATAAGTTGGAGAATTGAAGATAAATCTAAATCAGAAATATCTG
CAACTATAGATGATTTAAGAATAATAAAGGCGCTTCTTTTAGCAGAAGAAAAATGGAACGATAAGAGTTATCGAGGTATA
GCACTTAGAATATCTAAAGGAATATCTAAAGAATTAATAGAAAATGATATTCTTGCGGATTTTAATGATGGAATTTCAAA
GAGTAAAACTACAACACTATGTTATTTAGATGTACAAACAATAAAAATGCTTTCAAACCTTAATTCTTCATGGGAAAAAG
TATTAAAAACATCGTTGCAAATTTTGAATAATGGATATGTAAGTGATGAAGTACCTCTTTATAAAAAAGAATTTTATAGA
GCAAGTGAAACATATGATGATGAAAATATAGATACGTTATTATCTATGATTGTATTGTTAAATAAACAAGAATATGGTGA
AGATATAGGTAAAAGCATAGCTTGGATAAAACAAAAATTTATAAATGATGGTTTTATTTCTACTTTATATTCAACTAGTG
GAGAAAGTTTAACTAATATAGAATCAACATCTATATACTCATTCATAATACAAATGGCATCTAAGGCAGATGATAAAGAA
TTAGCAAGACTTGCAATGAATAAAGTAAAAGCTTTTCAAGTAAATAACAAAGAAAGTATAATATATGGTGGTTATGGTAT
GGAAGATGGATTACAAGTGTATTCTTATGACAATTTGAATGCGTTATTTGCTCATAGATATTTTAAATATCAATAG

Upstream 100 bases:

>100_bases
ACAAAGTAACTACTTATTATAACGTTTATAAATATCTATATTCTAATTCAAAAAAGTGAGAACAAAAATATTAGGATATA
GCTAAAAAGATGAGGGTAAA

Downstream 100 bases:

>100_bases
ACCATTTAATATTAAATTAATATATAGCATACGTTTAGTTATTAGTAGATAATTATACGTATGTTATTTTTAATGAGAAA
TATTTGAAGATTGAATATTA

Product: glycosyl hydrolase, family 8

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MKKKITLILAILIVGIIIYYNAAPYFRNVETDKVWLQLDTCDEEKLLLDFINNKLMDEEGGVYTNYINSDSQGDITKGHA
VLSESQGIMLLYSLEKNDRITFDRTLDYIRNYMVLKNNLISWRIEDKSKSEISATIDDLRIIKALLLAEEKWNDKSYRGI
ALRISKGISKELIENDILADFNDGISKSKTTTLCYLDVQTIKMLSNLNSSWEKVLKTSLQILNNGYVSDEVPLYKKEFYR
ASETYDDENIDTLLSMIVLLNKQEYGEDIGKSIAWIKQKFINDGFISTLYSTSGESLTNIESTSIYSFIIQMASKADDKE
LARLAMNKVKAFQVNNKESIIYGGYGMEDGLQVYSYDNLNALFAHRYFKYQ

Sequences:

>Translated_371_residues
MKKKITLILAILIVGIIIYYNAAPYFRNVETDKVWLQLDTCDEEKLLLDFINNKLMDEEGGVYTNYINSDSQGDITKGHA
VLSESQGIMLLYSLEKNDRITFDRTLDYIRNYMVLKNNLISWRIEDKSKSEISATIDDLRIIKALLLAEEKWNDKSYRGI
ALRISKGISKELIENDILADFNDGISKSKTTTLCYLDVQTIKMLSNLNSSWEKVLKTSLQILNNGYVSDEVPLYKKEFYR
ASETYDDENIDTLLSMIVLLNKQEYGEDIGKSIAWIKQKFINDGFISTLYSTSGESLTNIESTSIYSFIIQMASKADDKE
LARLAMNKVKAFQVNNKESIIYGGYGMEDGLQVYSYDNLNALFAHRYFKYQ
>Mature_371_residues
MKKKITLILAILIVGIIIYYNAAPYFRNVETDKVWLQLDTCDEEKLLLDFINNKLMDEEGGVYTNYINSDSQGDITKGHA
VLSESQGIMLLYSLEKNDRITFDRTLDYIRNYMVLKNNLISWRIEDKSKSEISATIDDLRIIKALLLAEEKWNDKSYRGI
ALRISKGISKELIENDILADFNDGISKSKTTTLCYLDVQTIKMLSNLNSSWEKVLKTSLQILNNGYVSDEVPLYKKEFYR
ASETYDDENIDTLLSMIVLLNKQEYGEDIGKSIAWIKQKFINDGFISTLYSTSGESLTNIESTSIYSFIIQMASKADDKE
LARLAMNKVKAFQVNNKESIIYGGYGMEDGLQVYSYDNLNALFAHRYFKYQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR012341 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42632; Mature: 42632

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKITLILAILIVGIIIYYNAAPYFRNVETDKVWLQLDTCDEEKLLLDFINNKLMDEEG
CCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCC
GVYTNYINSDSQGDITKGHAVLSESQGIMLLYSLEKNDRITFDRTLDYIRNYMVLKNNLI
CEEEEECCCCCCCCCCCCCHHEECCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHCCCEE
SWRIEDKSKSEISATIDDLRIIKALLLAEEKWNDKSYRGIALRISKGISKELIENDILAD
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHCCHHC
FNDGISKSKTTTLCYLDVQTIKMLSNLNSSWEKVLKTSLQILNNGYVSDEVPLYKKEFYR
CCCCCCCCCCEEEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
ASETYDDENIDTLLSMIVLLNKQEYGEDIGKSIAWIKQKFINDGFISTLYSTSGESLTNI
HCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCC
ESTSIYSFIIQMASKADDKELARLAMNKVKAFQVNNKESIIYGGYGMEDGLQVYSYDNLN
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEECCCCEEEECCCCCCCCCEEEEECCCH
ALFAHRYFKYQ
HHHHHHHHCCC
>Mature Secondary Structure
MKKKITLILAILIVGIIIYYNAAPYFRNVETDKVWLQLDTCDEEKLLLDFINNKLMDEEG
CCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCC
GVYTNYINSDSQGDITKGHAVLSESQGIMLLYSLEKNDRITFDRTLDYIRNYMVLKNNLI
CEEEEECCCCCCCCCCCCCHHEECCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHCCCEE
SWRIEDKSKSEISATIDDLRIIKALLLAEEKWNDKSYRGIALRISKGISKELIENDILAD
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHCCHHC
FNDGISKSKTTTLCYLDVQTIKMLSNLNSSWEKVLKTSLQILNNGYVSDEVPLYKKEFYR
CCCCCCCCCCEEEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
ASETYDDENIDTLLSMIVLLNKQEYGEDIGKSIAWIKQKFINDGFISTLYSTSGESLTNI
HCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCC
ESTSIYSFIIQMASKADDKELARLAMNKVKAFQVNNKESIIYGGYGMEDGLQVYSYDNLN
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEECCCCEEEECCCCCCCCCEEEEECCCH
ALFAHRYFKYQ
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]